RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 TTC17Q96AE7 1141 aa4.16□□□□□ -1.74
ECHDC1-213ENST00000474240 ACO2Q99798 780 aaKnown RBP4.16□□□□□ -1.74
ECHDC1-213ENST00000474240 MYOCQ99972 504 aa4.16□□□□□ -1.74
ECHDC1-213ENST00000474240 CNPPD1Q9BV87 410 aa4.16□□□□□ -1.74
ECHDC1-213ENST00000474240 GPR35Q9HC97 309 aa4.16□□□□□ -1.74
ECHDC1-213ENST00000474240 TMEM74BQ9NUR3 256 aa4.16□□□□□ -1.74
ECHDC1-213ENST00000474240 PIH1D1Q9NWS0 290 aaKnown RBP4.16□□□□□ -1.74
ECHDC1-213ENST00000474240 CHPF2Q9P2E5 772 aa4.16□□□□□ -1.74
ECHDC1-213ENST00000474240 NOB1Q9ULX3 412 aaKnown RBP4.16□□□□□ -1.74
ECHDC1-213ENST00000474240 PCDHA3Q9Y5H8 950 aa4.16□□□□□ -1.74
ECHDC1-213ENST00000474240 CAPN8A6NHC0 703 aa4.15□□□□□ -1.75
ECHDC1-213ENST00000474240 TMEM200CA6NKL6 621 aa4.15□□□□□ -1.75
ECHDC1-213ENST00000474240 AHRRA9YTQ3 701 aa4.15□□□□□ -1.75
ECHDC1-213ENST00000474240 FRS3O43559 492 aa4.15□□□□□ -1.75
ECHDC1-213ENST00000474240 FAM20BO75063 409 aa4.15□□□□□ -1.75
ECHDC1-213ENST00000474240 ERN1O75460 977 aaKnown RBP4.15□□□□□ -1.75
ECHDC1-213ENST00000474240 CDKL5O76039 1030 aa4.15□□□□□ -1.75
ECHDC1-213ENST00000474240 AGFG2O95081 481 aa4.15□□□□□ -1.75
ECHDC1-213ENST00000474240 ABHD16AO95870 558 aa4.15□□□□□ -1.75
ECHDC1-213ENST00000474240 FOSP01100 380 aaPredicted RBP4.15□□□□□ -1.75
ECHDC1-213ENST00000474240 LMNAP02545 664 aaKnown RBP4.15□□□□□ -1.75
ECHDC1-213ENST00000474240 ALDH2P05091 517 aa4.15□□□□□ -1.75
ECHDC1-213ENST00000474240 GJB1P08034 283 aa4.15□□□□□ -1.75
ECHDC1-213ENST00000474240 AGFG1P52594 562 aaKnown RBP4.15□□□□□ -1.75
ECHDC1-213ENST00000474240 RAB1AP62820 205 aa4.15□□□□□ -1.75
ECHDC1-213ENST00000474240 SLC25A3Q00325 362 aa4.15□□□□□ -1.75
ECHDC1-213ENST00000474240 SATB1Q01826 763 aa4.15□□□□□ -1.75
ECHDC1-213ENST00000474240 GUCY1B3Q02153 619 aa4.15□□□□□ -1.75
ECHDC1-213ENST00000474240 PDCD4Q53EL6 469 aaKnown RBP4.15□□□□□ -1.75
ECHDC1-213ENST00000474240 UTP14CQ5TAP6 766 aaKnown RBP4.15□□□□□ -1.75
ECHDC1-213ENST00000474240 METRNLQ641Q3 311 aa4.15□□□□□ -1.75
ECHDC1-213ENST00000474240 CLNKQ7Z7G1 428 aa4.15□□□□□ -1.75
ECHDC1-213ENST00000474240 RAVER1Q8IY67 606 aaKnown RBP4.15□□□□□ -1.75
ECHDC1-213ENST00000474240 FUBP1Q96AE4 644 aaKnown RBP4.15□□□□□ -1.75
ECHDC1-213ENST00000474240 SUCLG2Q96I99 432 aa4.15□□□□□ -1.75
ECHDC1-213ENST00000474240 MOGAT1Q96PD6 335 aa4.15□□□□□ -1.75
ECHDC1-213ENST00000474240 SMOQ99835 787 aa4.15□□□□□ -1.75
ECHDC1-213ENST00000474240 MRPL46Q9H2W6 279 aaKnown RBP4.15□□□□□ -1.75
ECHDC1-213ENST00000474240 RIOX1Q9H6W3 641 aa4.15□□□□□ -1.75
ECHDC1-213ENST00000474240 NRDE2Q9H7Z3 1164 aa4.15□□□□□ -1.75
ECHDC1-213ENST00000474240 GALNT9Q9HCQ5 603 aa4.15□□□□□ -1.75
ECHDC1-213ENST00000474240 ANLNQ9NQW6 1124 aa4.15□□□□□ -1.75
ECHDC1-213ENST00000474240 GPRC5BQ9NZH0 403 aa4.15□□□□□ -1.75
ECHDC1-213ENST00000474240 GABBR1Q9UBS5 961 aa4.15□□□□□ -1.75
ECHDC1-213ENST00000474240 ZNHIT2Q9UHR6 403 aa4.15□□□□□ -1.75
ECHDC1-213ENST00000474240 MTO1Q9Y2Z2 717 aaKnown RBP4.15□□□□□ -1.75
ECHDC1-213ENST00000474240 WNT10BO00744 389 aa4.14□□□□□ -1.75
ECHDC1-213ENST00000474240 PHGDHO43175 533 aaKnown RBP4.14□□□□□ -1.75
ECHDC1-213ENST00000474240 NCR1O76036 304 aa4.14□□□□□ -1.75
ECHDC1-213ENST00000474240 PARNO95453 639 aaKnown RBP4.14□□□□□ -1.75
ECHDC1-213ENST00000474240 GCP02774 474 aa4.14□□□□□ -1.75
ECHDC1-213ENST00000474240 THP07101 528 aa4.14□□□□□ -1.75
ECHDC1-213ENST00000474240 RPL17P18621 184 aaKnown RBP4.14□□□□□ -1.75
ECHDC1-213ENST00000474240 FGFR4P22455 802 aa4.14□□□□□ -1.75
ECHDC1-213ENST00000474240 AVPR1BP47901 424 aa4.14□□□□□ -1.75
ECHDC1-213ENST00000474240 KRTAP10-7P60409 375 aaPredicted RBP4.14□□□□□ -1.75
ECHDC1-213ENST00000474240 CXADRP78310 365 aa4.14□□□□□ -1.75
ECHDC1-213ENST00000474240 FAM193AP78312 1265 aa4.14□□□□□ -1.75
ECHDC1-213ENST00000474240 OCA2Q04671 838 aa4.14□□□□□ -1.75
ECHDC1-213ENST00000474240 TCF15Q12870 199 aa4.14□□□□□ -1.75
ECHDC1-213ENST00000474240 PLS1Q14651 629 aa4.14□□□□□ -1.75
ECHDC1-213ENST00000474240 PTPAQ15257 358 aa4.14□□□□□ -1.75
ECHDC1-213ENST00000474240 LRRC41Q15345 812 aa4.14□□□□□ -1.75
ECHDC1-213ENST00000474240 EPHA10Q5JZY3 1008 aa4.14□□□□□ -1.75
ECHDC1-213ENST00000474240 ABHD17BQ5VST6 288 aa4.14□□□□□ -1.75
ECHDC1-213ENST00000474240 PAPD7Q5XG87 772 aaKnown RBP4.14□□□□□ -1.75
ECHDC1-213ENST00000474240 KRTAP5-11Q6L8G4 156 aa4.14□□□□□ -1.75
ECHDC1-213ENST00000474240 PPP4R4Q6NUP7 873 aa4.14□□□□□ -1.75
ECHDC1-213ENST00000474240 SYCE2Q6PIF2 218 aa4.14□□□□□ -1.75
ECHDC1-213ENST00000474240 RHOUQ7L0Q8 258 aa4.14□□□□□ -1.75
ECHDC1-213ENST00000474240 ARHGEF19Q8IW93 802 aa4.14□□□□□ -1.75
ECHDC1-213ENST00000474240 WDR75Q8IWA0 830 aaKnown RBP4.14□□□□□ -1.75
ECHDC1-213ENST00000474240 TMEM132CQ8N3T6 1108 aa4.14□□□□□ -1.75
ECHDC1-213ENST00000474240 ZBTB34Q8NCN2 500 aa4.14□□□□□ -1.75
ECHDC1-213ENST00000474240 TTC8Q8TAM2 541 aa4.14□□□□□ -1.75
ECHDC1-213ENST00000474240 KBTBD7Q8WVZ9 684 aa4.14□□□□□ -1.75
ECHDC1-213ENST00000474240 NEU1Q99519 415 aa4.14□□□□□ -1.75
ECHDC1-213ENST00000474240 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.14□□□□□ -1.75
ECHDC1-213ENST00000474240 CCDC195A0A1B0GUA6 201 aa4.13□□□□□ -1.75
ECHDC1-213ENST00000474240 A0A1W2PPL8 197 aa4.13□□□□□ -1.75
ECHDC1-213ENST00000474240 A0A1W2PS29 197 aa4.13□□□□□ -1.75
ECHDC1-213ENST00000474240 LRRC14BA6NHZ5 514 aa4.13□□□□□ -1.75
ECHDC1-213ENST00000474240 VSTM5A8MXK1 200 aa4.13□□□□□ -1.75
ECHDC1-213ENST00000474240 INO80B-WBP1J3KQ70 363 aa4.13□□□□□ -1.75
ECHDC1-213ENST00000474240 ZNF185O15231 689 aa4.13□□□□□ -1.75
ECHDC1-213ENST00000474240 MATN4O95460 622 aa4.13□□□□□ -1.75
ECHDC1-213ENST00000474240 ZBED1O96006 694 aa4.13□□□□□ -1.75
ECHDC1-213ENST00000474240 FCER1AP12319 257 aa4.13□□□□□ -1.75
ECHDC1-213ENST00000474240 KCNA2P16389 499 aa4.13□□□□□ -1.75
ECHDC1-213ENST00000474240 SLC6A2P23975 617 aa4.13□□□□□ -1.75
ECHDC1-213ENST00000474240 SLC6A4P31645 630 aa4.13□□□□□ -1.75
ECHDC1-213ENST00000474240 RPS7P62081 194 aaKnown RBP4.13□□□□□ -1.75
ECHDC1-213ENST00000474240 HSD11B2P80365 405 aa4.13□□□□□ -1.75
ECHDC1-213ENST00000474240 SLFN5Q08AF3 891 aa4.13□□□□□ -1.75
ECHDC1-213ENST00000474240 HLXQ14774 488 aaPredicted RBP4.13□□□□□ -1.75
ECHDC1-213ENST00000474240 AMOTQ4VCS5 1084 aa4.13□□□□□ -1.75
ECHDC1-213ENST00000474240 SLC44A4Q53GD3 710 aa4.13□□□□□ -1.75
ECHDC1-213ENST00000474240 KHDC1LQ5JSQ8 128 aa4.13□□□□□ -1.75
ECHDC1-213ENST00000474240 SP5Q6BEB4 398 aaPredicted RBP4.13□□□□□ -1.75
ECHDC1-213ENST00000474240 MAEAQ7L5Y9 396 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms