RNA–Protein interactions for RNA: ENST00000474144.5

TMEM54-204, Transcript of transmembrane protein 54, humanhuman

TSL 3

Gene TMEM54, Length 748 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-204ENST00000474144 HOXD13P35453 343 aa21.51■■□□□ 1.03
TMEM54-204ENST00000474144 CCR2P41597 374 aa21.51■■□□□ 1.03
TMEM54-204ENST00000474144 PTPN5P54829 565 aa21.51■■□□□ 1.03
TMEM54-204ENST00000474144 GPC5P78333 572 aa21.51■■□□□ 1.03
TMEM54-204ENST00000474144 ALYREFQ86V81 257 aaKnown RBP21.51■■□□□ 1.03
TMEM54-204ENST00000474144 BRSK2Q8IWQ3 736 aa21.51■■□□□ 1.03
TMEM54-204ENST00000474144 OR10T2Q8NGX3 314 aa21.51■■□□□ 1.03
TMEM54-204ENST00000474144 BORCS6Q96GS4 357 aa21.51■■□□□ 1.03
TMEM54-204ENST00000474144 PRRX2Q99811 253 aa21.51■■□□□ 1.03
TMEM54-204ENST00000474144 KXD1Q9BQD3 176 aa21.51■■□□□ 1.03
TMEM54-204ENST00000474144 PYM1Q9BRP8 204 aaKnown RBP21.51■■□□□ 1.03
TMEM54-204ENST00000474144 BLZF1Q9H2G9 400 aa21.51■■□□□ 1.03
TMEM54-204ENST00000474144 TMEM206Q9H813 350 aa21.51■■□□□ 1.03
TMEM54-204ENST00000474144 AVENQ9NQS1 362 aaPredicted RBP21.51■■□□□ 1.03
TMEM54-204ENST00000474144 RBAKQ9NYW8 714 aaPredicted RBP21.51■■□□□ 1.03
TMEM54-204ENST00000474144 TCHHQ07283 1943 aa21.51■■□□□ 1.03
TMEM54-204ENST00000474144 CYB561D2O14569 222 aa21.5■■□□□ 1.03
TMEM54-204ENST00000474144 TAF6P49848 677 aa21.5■■□□□ 1.03
TMEM54-204ENST00000474144 CLCN5P51795 746 aa21.5■■□□□ 1.03
TMEM54-204ENST00000474144 TFAMQ00059 246 aaKnown RBP21.5■■□□□ 1.03
TMEM54-204ENST00000474144 AMPD3Q01432 767 aa21.5■■□□□ 1.03
TMEM54-204ENST00000474144 DUSP4Q13115 394 aa21.5■■□□□ 1.03
TMEM54-204ENST00000474144 GPR17Q13304 367 aa21.5■■□□□ 1.03
TMEM54-204ENST00000474144 RESP18Q5W5W9 173 aa21.5■■□□□ 1.03
TMEM54-204ENST00000474144 ARMCX5Q6P1M9 558 aa21.5■■□□□ 1.03
TMEM54-204ENST00000474144 MTSS1LQ765P7 747 aa21.5■■□□□ 1.03
TMEM54-204ENST00000474144 C7orf25Q9BPX7 421 aa21.5■■□□□ 1.03
TMEM54-204ENST00000474144 RTP3Q9BQQ7 232 aa21.5■■□□□ 1.03
TMEM54-204ENST00000474144 OXCT2Q9BYC2 517 aaPredicted RBP21.5■■□□□ 1.03
TMEM54-204ENST00000474144 MAFFQ9ULX9 164 aa21.5■■□□□ 1.03
TMEM54-204ENST00000474144 SLC27A5Q9Y2P5 690 aa21.5■■□□□ 1.03
TMEM54-204ENST00000474144 ZDHHC9Q9Y397 364 aa21.5■■□□□ 1.03
TMEM54-204ENST00000474144 YIPF1Q9Y548 306 aa21.5■■□□□ 1.03
TMEM54-204ENST00000474144 COL4A3Q01955 1670 aa21.5■■□□□ 1.03
TMEM54-204ENST00000474144 MTMR11A4FU01 709 aa21.49■■□□□ 1.03
TMEM54-204ENST00000474144 GALR2O43603 387 aaPredicted RBP21.49■■□□□ 1.03
TMEM54-204ENST00000474144 EXTL3O43909 919 aa21.49■■□□□ 1.03
TMEM54-204ENST00000474144 MOSPD3O75425 235 aa21.49■■□□□ 1.03
TMEM54-204ENST00000474144 LDHAP00338 332 aaKnown RBP21.49■■□□□ 1.03
TMEM54-204ENST00000474144 CYP11A1P05108 521 aa21.49■■□□□ 1.03
TMEM54-204ENST00000474144 GJA1P17302 382 aa21.49■■□□□ 1.03
TMEM54-204ENST00000474144 MYBPC2Q14324 1141 aa21.49■■□□□ 1.03
TMEM54-204ENST00000474144 ATL3Q6DD88 541 aa21.49■■□□□ 1.03
TMEM54-204ENST00000474144 CNNM4Q6P4Q7 775 aa21.49■■□□□ 1.03
TMEM54-204ENST00000474144 TTC9BQ8N6N2 239 aa21.49■■□□□ 1.03
TMEM54-204ENST00000474144 ATAD1Q8NBU5 361 aa21.49■■□□□ 1.03
TMEM54-204ENST00000474144 ZNF512Q96ME7 567 aaPredicted RBP21.49■■□□□ 1.03
TMEM54-204ENST00000474144 PLA2G2FQ9BZM2 168 aa21.49■■□□□ 1.03
TMEM54-204ENST00000474144 PDE11AQ9HCR9 933 aa21.49■■□□□ 1.03
TMEM54-204ENST00000474144 SLC2A4RGQ9NR83 387 aa21.49■■□□□ 1.03
TMEM54-204ENST00000474144 FAM86C1Q9NVL1 165 aa21.49■■□□□ 1.03
TMEM54-204ENST00000474144 FAM13BQ9NYF5 915 aa21.49■■□□□ 1.03
TMEM54-204ENST00000474144 RCOR1Q9UKL0 485 aa21.49■■□□□ 1.03
TMEM54-204ENST00000474144 CFAP45Q9UL16 551 aa21.49■■□□□ 1.03
TMEM54-204ENST00000474144 H0Y858 1186 aa21.48■■□□□ 1.03
TMEM54-204ENST00000474144 STK25O00506 426 aa21.48■■□□□ 1.03
TMEM54-204ENST00000474144 SOAT2O75908 522 aa21.48■■□□□ 1.03
TMEM54-204ENST00000474144 ITGB3P05106 788 aa21.48■■□□□ 1.03
TMEM54-204ENST00000474144 AOC1P19801 751 aa21.48■■□□□ 1.03
TMEM54-204ENST00000474144 PAX3P23760 479 aa21.48■■□□□ 1.03
TMEM54-204ENST00000474144 WSCD1Q658N2 575 aa21.48■■□□□ 1.03
TMEM54-204ENST00000474144 CENPPQ6IPU0 288 aa21.48■■□□□ 1.03
TMEM54-204ENST00000474144 PDZD4Q76G19 769 aaPredicted RBP21.48■■□□□ 1.03
TMEM54-204ENST00000474144 EPM2AIP1Q7L775 607 aaPredicted RBP21.48■■□□□ 1.03
TMEM54-204ENST00000474144 NT5DC4Q86YG4 428 aa21.48■■□□□ 1.03
TMEM54-204ENST00000474144 GRAMD1CQ8IYS0 662 aa21.48■■□□□ 1.03
TMEM54-204ENST00000474144 GPD1LQ8N335 351 aa21.48■■□□□ 1.03
TMEM54-204ENST00000474144 ELMOD1Q8N336 334 aa21.48■■□□□ 1.03
TMEM54-204ENST00000474144 C1orf127Q8N9H9 656 aa21.48■■□□□ 1.03
TMEM54-204ENST00000474144 DNAJC25Q9H1X3 360 aa21.48■■□□□ 1.03
TMEM54-204ENST00000474144 KPNA7A9QM74 516 aa21.47■■□□□ 1.03
TMEM54-204ENST00000474144 MYL4P12829 197 aa21.47■■□□□ 1.03
TMEM54-204ENST00000474144 POLR2BP30876 1174 aaKnown RBP21.47■■□□□ 1.03
TMEM54-204ENST00000474144 AFMP43652 599 aa21.47■■□□□ 1.03
TMEM54-204ENST00000474144 EHHADHQ08426 723 aa21.47■■□□□ 1.03
TMEM54-204ENST00000474144 CUL4BQ13620 913 aa21.47■■□□□ 1.03
TMEM54-204ENST00000474144 SLC39A12Q504Y0 691 aa21.47■■□□□ 1.03
TMEM54-204ENST00000474144 FAM26FQ5R3K3 315 aa21.47■■□□□ 1.03
TMEM54-204ENST00000474144 LMBRD2Q68DH5 695 aaPredicted RBP21.47■■□□□ 1.03
TMEM54-204ENST00000474144 TANGO2Q6ICL3 276 aa21.47■■□□□ 1.03
TMEM54-204ENST00000474144 IQCEQ6IPM2 695 aa21.47■■□□□ 1.03
TMEM54-204ENST00000474144 STXBP4Q6ZWJ1 553 aa21.47■■□□□ 1.03
TMEM54-204ENST00000474144 CXorf38Q8TB03 319 aa21.47■■□□□ 1.03
TMEM54-204ENST00000474144 ZNF507Q8TCN5 953 aa21.47■■□□□ 1.03
TMEM54-204ENST00000474144 ZSWIM3Q96MP5 696 aa21.47■■□□□ 1.03
TMEM54-204ENST00000474144 ZCWPW1Q9H0M4 648 aa21.47■■□□□ 1.03
TMEM54-204ENST00000474144 ARHGEF3Q9NR81 526 aa21.47■■□□□ 1.03
TMEM54-204ENST00000474144 GDE1Q9NZC3 331 aa21.47■■□□□ 1.03
TMEM54-204ENST00000474144 AGAP1Q9UPQ3 857 aa21.47■■□□□ 1.03
TMEM54-204ENST00000474144 EIF3DO15371 548 aaKnown RBP eCLIP21.46■■□□□ 1.03
TMEM54-204ENST00000474144 MRE11P49959 708 aa21.46■■□□□ 1.03
TMEM54-204ENST00000474144 NUBP1P53384 320 aa21.46■■□□□ 1.03
TMEM54-204ENST00000474144 SV2CQ496J9 727 aa21.46■■□□□ 1.03
TMEM54-204ENST00000474144 CYP4A22Q5TCH4 519 aa21.46■■□□□ 1.03
TMEM54-204ENST00000474144 UNC13DQ70J99 1090 aa21.46■■□□□ 1.03
TMEM54-204ENST00000474144 LRRTM3Q86VH5 581 aa21.46■■□□□ 1.03
TMEM54-204ENST00000474144 METTL23Q86XA0 190 aa21.46■■□□□ 1.03
TMEM54-204ENST00000474144 CBWD2Q8IUF1 395 aa21.46■■□□□ 1.03
TMEM54-204ENST00000474144 NELFCDQ8IXH7 590 aa21.46■■□□□ 1.03
TMEM54-204ENST00000474144 CSGALNACT2Q8N6G5 542 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms