RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 ZFP28Q8NHY6 868 aa5.05□□□□□ -1.6
BRCA1-212ENST00000473961 DACT3Q96B18 629 aaPredicted RBP5.05□□□□□ -1.6
BRCA1-212ENST00000473961 EVI5LQ96CN4 794 aa5.05□□□□□ -1.6
BRCA1-212ENST00000473961 RPL10LQ96L21 214 aaKnown RBP5.05□□□□□ -1.6
BRCA1-212ENST00000473961 MOGAT1Q96PD6 335 aa5.05□□□□□ -1.6
BRCA1-212ENST00000473961 P2RX7Q99572 595 aaKnown RBP5.05□□□□□ -1.6
BRCA1-212ENST00000473961 STK33Q9BYT3 514 aa5.05□□□□□ -1.6
BRCA1-212ENST00000473961 IL23AQ9NPF7 189 aa5.05□□□□□ -1.6
BRCA1-212ENST00000473961 ZSCAN32Q9NX65 697 aa5.05□□□□□ -1.6
BRCA1-212ENST00000473961 COL20A1Q9P218 1284 aa5.05□□□□□ -1.6
BRCA1-212ENST00000473961 ZNF69Q9UC07 566 aa5.05□□□□□ -1.6
BRCA1-212ENST00000473961 HDAC5Q9UQL6 1122 aa5.05□□□□□ -1.6
BRCA1-212ENST00000473961 LZTS1Q9Y250 596 aa5.05□□□□□ -1.6
BRCA1-212ENST00000473961 PLEKHM1Q9Y4G2 1056 aa5.05□□□□□ -1.6
BRCA1-212ENST00000473961 A0A1W2PRX2 142 aa5.04□□□□□ -1.6
BRCA1-212ENST00000473961 SLC43A1O75387 559 aa5.04□□□□□ -1.6
BRCA1-212ENST00000473961 ABHD16AO95870 558 aa5.04□□□□□ -1.6
BRCA1-212ENST00000473961 POMCP01189 267 aa5.04□□□□□ -1.6
BRCA1-212ENST00000473961 ZNF888P0CJ79 500 aaPredicted RBP5.04□□□□□ -1.6
BRCA1-212ENST00000473961 HARSP12081 509 aaKnown RBP5.04□□□□□ -1.6
BRCA1-212ENST00000473961 ALDH9A1P49189 494 aa5.04□□□□□ -1.6
BRCA1-212ENST00000473961 MRPL49Q13405 166 aaKnown RBP5.04□□□□□ -1.6
BRCA1-212ENST00000473961 MPEG1Q2M385 716 aa5.04□□□□□ -1.6
BRCA1-212ENST00000473961 SLC35G1Q2M3R5 365 aa5.04□□□□□ -1.6
BRCA1-212ENST00000473961 ZACNQ401N2 412 aa5.04□□□□□ -1.6
BRCA1-212ENST00000473961 C3orf38Q5JPI3 329 aa5.04□□□□□ -1.6
BRCA1-212ENST00000473961 MCTP2Q6DN12 878 aa5.04□□□□□ -1.6
BRCA1-212ENST00000473961 ZNF529Q6P280 563 aa5.04□□□□□ -1.6
BRCA1-212ENST00000473961 BORAQ6PGQ7 559 aa5.04□□□□□ -1.6
BRCA1-212ENST00000473961 PLEKHH3Q7Z736 793 aa5.04□□□□□ -1.6
BRCA1-212ENST00000473961 TMEFF1Q8IYR6 380 aa5.04□□□□□ -1.6
BRCA1-212ENST00000473961 CARFQ8N187 725 aa5.04□□□□□ -1.6
BRCA1-212ENST00000473961 MPP5Q8N3R9 675 aa5.04□□□□□ -1.6
BRCA1-212ENST00000473961 DCBLD1Q8N8Z6 715 aa5.04□□□□□ -1.6
BRCA1-212ENST00000473961 PCSK9Q8NBP7 692 aaKnown RBP5.04□□□□□ -1.6
BRCA1-212ENST00000473961 TXNDC5Q8NBS9 432 aaKnown RBP5.04□□□□□ -1.6
BRCA1-212ENST00000473961 SYT8Q8NBV8 401 aa5.04□□□□□ -1.6
BRCA1-212ENST00000473961 FBXO18Q8NFZ0 1043 aa5.04□□□□□ -1.6
BRCA1-212ENST00000473961 TRAPPC12Q8WVT3 735 aa5.04□□□□□ -1.6
BRCA1-212ENST00000473961 SCAMP4Q969E2 229 aa5.04□□□□□ -1.6
BRCA1-212ENST00000473961 MUL1Q969V5 352 aa5.04□□□□□ -1.6
BRCA1-212ENST00000473961 GCC1Q96CN9 775 aa5.04□□□□□ -1.6
BRCA1-212ENST00000473961 SORCS2Q96PQ0 1159 aa5.04□□□□□ -1.6
BRCA1-212ENST00000473961 TCF25Q9BQ70 676 aa5.04□□□□□ -1.6
BRCA1-212ENST00000473961 SPATA25Q9BR10 227 aa5.04□□□□□ -1.6
BRCA1-212ENST00000473961 MAGEB5Q9BZ81 275 aa5.04□□□□□ -1.6
BRCA1-212ENST00000473961 STK32BQ9NY57 414 aa5.04□□□□□ -1.6
BRCA1-212ENST00000473961 ZNF212Q9UDV6 495 aa5.04□□□□□ -1.6
BRCA1-212ENST00000473961 RGS17Q9UGC6 210 aaPredicted RBP5.04□□□□□ -1.6
BRCA1-212ENST00000473961 ITGB1BP2Q9UKP3 347 aa5.04□□□□□ -1.6
BRCA1-212ENST00000473961 CXorf49A8MYA2 514 aaPredicted RBP5.03□□□□□ -1.6
BRCA1-212ENST00000473961 F8W8V4 182 aa5.03□□□□□ -1.6
BRCA1-212ENST00000473961 PYCARD-AS1I3L0S3 204 aa5.03□□□□□ -1.6
BRCA1-212ENST00000473961 AREL1O15033 823 aa5.03□□□□□ -1.6
BRCA1-212ENST00000473961 MATN3O15232 486 aa5.03□□□□□ -1.6
BRCA1-212ENST00000473961 IRAK2O43187 625 aa5.03□□□□□ -1.6
BRCA1-212ENST00000473961 PLA2G6O60733 806 aa5.03□□□□□ -1.6
BRCA1-212ENST00000473961 RASSF9O75901 435 aa5.03□□□□□ -1.6
BRCA1-212ENST00000473961 MT-ND5P03915 603 aa5.03□□□□□ -1.6
BRCA1-212ENST00000473961 CYP2C9P11712 490 aa5.03□□□□□ -1.6
BRCA1-212ENST00000473961 HDCP19113 662 aa5.03□□□□□ -1.6
BRCA1-212ENST00000473961 MGAT1P26572 445 aa5.03□□□□□ -1.6
BRCA1-212ENST00000473961 CARSP49589 748 aaKnown RBP5.03□□□□□ -1.6
BRCA1-212ENST00000473961 AFF3P51826 1226 aaKnown RBP5.03□□□□□ -1.6
BRCA1-212ENST00000473961 CLRN1P58418 232 aa5.03□□□□□ -1.6
BRCA1-212ENST00000473961 RAC3P60763 192 aa5.03□□□□□ -1.6
BRCA1-212ENST00000473961 HGFACQ04756 655 aa5.03□□□□□ -1.6
BRCA1-212ENST00000473961 FSTL1Q12841 308 aa5.03□□□□□ -1.6
BRCA1-212ENST00000473961 PPFIA1Q13136 1202 aa5.03□□□□□ -1.6
BRCA1-212ENST00000473961 PRKG1Q13976 671 aa5.03□□□□□ -1.6
BRCA1-212ENST00000473961 ZFYVE27Q5T4F4 411 aa5.03□□□□□ -1.6
BRCA1-212ENST00000473961 MFSD5Q6N075 450 aa5.03□□□□□ -1.6
BRCA1-212ENST00000473961 LDHAL6AQ6ZMR3 332 aa5.03□□□□□ -1.6
BRCA1-212ENST00000473961 SP8Q8IXZ3 490 aa5.03□□□□□ -1.6
BRCA1-212ENST00000473961 ADAMTS17Q8TE56 1095 aa5.03□□□□□ -1.6
BRCA1-212ENST00000473961 REXO4Q9GZR2 422 aaKnown RBP5.03□□□□□ -1.6
BRCA1-212ENST00000473961 USP40Q9NVE5 1235 aa5.03□□□□□ -1.6
BRCA1-212ENST00000473961 FAM30AQ9NZY2 134 aa5.03□□□□□ -1.6
BRCA1-212ENST00000473961 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.03□□□□□ -1.6
BRCA1-212ENST00000473961 TMX2Q9Y320 296 aa5.03□□□□□ -1.6
BRCA1-212ENST00000473961 ATRNL1Q5VV63 1379 aa5.03□□□□□ -1.6
BRCA1-212ENST00000473961 MROH6A6NGR9 719 aa5.02□□□□□ -1.61
BRCA1-212ENST00000473961 PRR5-ARHGAP8B1AHC4 643 aa5.02□□□□□ -1.61
BRCA1-212ENST00000473961 GRPP07492 148 aa5.02□□□□□ -1.61
BRCA1-212ENST00000473961 MFSD14BQ5SR56 506 aa5.02□□□□□ -1.61
BRCA1-212ENST00000473961 FKBP15Q5T1M5 1219 aa5.02□□□□□ -1.61
BRCA1-212ENST00000473961 KLHDC7AQ5VTJ3 777 aa5.02□□□□□ -1.61
BRCA1-212ENST00000473961 ARL6IP4Q66PJ3 421 aaKnown RBP5.02□□□□□ -1.61
BRCA1-212ENST00000473961 USP17L6PQ6QN14 398 aa5.02□□□□□ -1.61
BRCA1-212ENST00000473961 MMS22LQ6ZRQ5 1243 aa5.02□□□□□ -1.61
BRCA1-212ENST00000473961 DOK3Q7L591 496 aa5.02□□□□□ -1.61
BRCA1-212ENST00000473961 FAM83AQ86UY5 434 aa5.02□□□□□ -1.61
BRCA1-212ENST00000473961 KRT73Q86Y46 540 aa5.02□□□□□ -1.61
BRCA1-212ENST00000473961 KBTBD2Q8IY47 623 aa5.02□□□□□ -1.61
BRCA1-212ENST00000473961 FITM2Q8N6M3 262 aa5.02□□□□□ -1.61
BRCA1-212ENST00000473961 CELF5Q8N6W0 485 aaKnown RBP5.02□□□□□ -1.61
BRCA1-212ENST00000473961 SHCBP1Q8NEM2 672 aa5.02□□□□□ -1.61
BRCA1-212ENST00000473961 CYP2W1Q8TAV3 490 aa5.02□□□□□ -1.61
BRCA1-212ENST00000473961 SPSB4Q96A44 273 aa5.02□□□□□ -1.61
BRCA1-212ENST00000473961 CEP95Q96GE4 821 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms