RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 BACE2Q9Y5Z0 518 aa13.35□□□□□ -0.27
DDX56-209ENST00000473924 CDY1Q9Y6F8 540 aa13.35□□□□□ -0.27
DDX56-209ENST00000473924 LETM1O95202 739 aaPredicted RBP13.34□□□□□ -0.27
DDX56-209ENST00000473924 GLUD1P00367 558 aa13.34□□□□□ -0.27
DDX56-209ENST00000473924 CCDC192P0DO97 292 aa13.34□□□□□ -0.27
DDX56-209ENST00000473924 EPCAMP16422 314 aa13.34□□□□□ -0.27
DDX56-209ENST00000473924 ATICP31939 592 aa13.34□□□□□ -0.27
DDX56-209ENST00000473924 GTF2H1P32780 548 aa13.34□□□□□ -0.27
DDX56-209ENST00000473924 TNNC1P63316 161 aa13.34□□□□□ -0.27
DDX56-209ENST00000473924 RBM10P98175 930 aaKnown RBP13.34□□□□□ -0.27
DDX56-209ENST00000473924 PPP3CAQ08209 521 aa13.34□□□□□ -0.27
DDX56-209ENST00000473924 CTC1Q2NKJ3 1217 aa13.34□□□□□ -0.27
DDX56-209ENST00000473924 ZNF699Q32M78 642 aa13.34□□□□□ -0.27
DDX56-209ENST00000473924 WDR72Q3MJ13 1102 aa13.34□□□□□ -0.27
DDX56-209ENST00000473924 ZACNQ401N2 412 aa13.34□□□□□ -0.27
DDX56-209ENST00000473924 C1orf220Q5T0J3 134 aa13.34□□□□□ -0.27
DDX56-209ENST00000473924 KRT39Q6A163 491 aa13.34□□□□□ -0.27
DDX56-209ENST00000473924 THEM5Q8N1Q8 247 aa13.34□□□□□ -0.27
DDX56-209ENST00000473924 CCDC150Q8NCX0 1101 aa13.34□□□□□ -0.27
DDX56-209ENST00000473924 MMS19Q96T76 1030 aa13.34□□□□□ -0.27
DDX56-209ENST00000473924 OXCT2Q9BYC2 517 aaPredicted RBP13.34□□□□□ -0.27
DDX56-209ENST00000473924 IMPG2Q9BZV3 1241 aa13.34□□□□□ -0.27
DDX56-209ENST00000473924 TMEM8AQ9HCN3 771 aa13.34□□□□□ -0.27
DDX56-209ENST00000473924 GDAP2Q9NXN4 497 aa13.34□□□□□ -0.27
DDX56-209ENST00000473924 THEGQ9P2T0 379 aa13.34□□□□□ -0.27
DDX56-209ENST00000473924 DPP7Q9UHL4 492 aa13.34□□□□□ -0.27
DDX56-209ENST00000473924 FBXL5Q9UKA1 691 aa13.34□□□□□ -0.27
DDX56-209ENST00000473924 BARX2Q9UMQ3 279 aaPredicted RBP13.34□□□□□ -0.27
DDX56-209ENST00000473924 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.33□□□□□ -0.28
DDX56-209ENST00000473924 H3BQ06 376 aaPredicted RBP13.33□□□□□ -0.28
DDX56-209ENST00000473924 ADAM12O43184 909 aa13.33□□□□□ -0.28
DDX56-209ENST00000473924 TGM5O43548 720 aa13.33□□□□□ -0.28
DDX56-209ENST00000473924 OAZ2O95190 189 aa13.33□□□□□ -0.28
DDX56-209ENST00000473924 VNN1O95497 513 aa13.33□□□□□ -0.28
DDX56-209ENST00000473924 GLP2RO95838 553 aa13.33□□□□□ -0.28
DDX56-209ENST00000473924 CYP11A1P05108 521 aa13.33□□□□□ -0.28
DDX56-209ENST00000473924 SPATA31D3P0C874 917 aa13.33□□□□□ -0.28
DDX56-209ENST00000473924 CPB1P15086 417 aa13.33□□□□□ -0.28
DDX56-209ENST00000473924 MXI1P50539 228 aa13.33□□□□□ -0.28
DDX56-209ENST00000473924 DLX2Q07687 328 aaPredicted RBP13.33□□□□□ -0.28
DDX56-209ENST00000473924 MRPL58Q14197 206 aaKnown RBP13.33□□□□□ -0.28
DDX56-209ENST00000473924 COL19A1Q14993 1142 aa13.33□□□□□ -0.28
DDX56-209ENST00000473924 SGSM1Q2NKQ1 1148 aa13.33□□□□□ -0.28
DDX56-209ENST00000473924 WSCD1Q658N2 575 aa13.33□□□□□ -0.28
DDX56-209ENST00000473924 RSPO2Q6UXX9 243 aaPredicted RBP13.33□□□□□ -0.28
DDX56-209ENST00000473924 SPATA31D4Q6ZUB0 917 aa13.33□□□□□ -0.28
DDX56-209ENST00000473924 VN1R2Q8NFZ6 395 aa13.33□□□□□ -0.28
DDX56-209ENST00000473924 SLC22A17Q8WUG5 538 aa13.33□□□□□ -0.28
DDX56-209ENST00000473924 DZANK1Q9NVP4 752 aa13.33□□□□□ -0.28
DDX56-209ENST00000473924 NXF1Q9UBU9 619 aaKnown RBP13.33□□□□□ -0.28
DDX56-209ENST00000473924 OR6C75A6NL08 312 aa13.32□□□□□ -0.28
DDX56-209ENST00000473924 TBX10O75333 385 aa13.32□□□□□ -0.28
DDX56-209ENST00000473924 STAU1O95793 577 aaKnown RBP13.32□□□□□ -0.28
DDX56-209ENST00000473924 HLA-DRAP01903 254 aa13.32□□□□□ -0.28
DDX56-209ENST00000473924 P4HA1P13674 534 aa13.32□□□□□ -0.28
DDX56-209ENST00000473924 LTBRP36941 435 aa13.32□□□□□ -0.28
DDX56-209ENST00000473924 TFF2Q03403 129 aa13.32□□□□□ -0.28
DDX56-209ENST00000473924 TYRO3Q06418 890 aa13.32□□□□□ -0.28
DDX56-209ENST00000473924 KCNC3Q14003 757 aa13.32□□□□□ -0.28
DDX56-209ENST00000473924 RAB33AQ14088 237 aa13.32□□□□□ -0.28
DDX56-209ENST00000473924 CLUL1Q15846 466 aa13.32□□□□□ -0.28
DDX56-209ENST00000473924 AAK1Q2M2I8 961 aa13.32□□□□□ -0.28
DDX56-209ENST00000473924 SOWAHAQ2M3V2 549 aa13.32□□□□□ -0.28
DDX56-209ENST00000473924 ZNF667Q5HYK9 610 aa13.32□□□□□ -0.28
DDX56-209ENST00000473924 SLC8B1Q6J4K2 584 aa13.32□□□□□ -0.28
DDX56-209ENST00000473924 ANKRD54Q6NXT1 300 aa13.32□□□□□ -0.28
DDX56-209ENST00000473924 TMEM184AQ6ZMB5 413 aa13.32□□□□□ -0.28
DDX56-209ENST00000473924 C15orf39Q6ZRI6 1047 aa13.32□□□□□ -0.28
DDX56-209ENST00000473924 DPH6Q7L8W6 267 aa13.32□□□□□ -0.28
DDX56-209ENST00000473924 FAM114A1Q8IWE2 563 aa13.32□□□□□ -0.28
DDX56-209ENST00000473924 ADGRF2Q8IZF7 708 aa13.32□□□□□ -0.28
DDX56-209ENST00000473924 TMEM86AQ8N2M4 240 aa13.32□□□□□ -0.28
DDX56-209ENST00000473924 PDCL2Q8N4E4 241 aa13.32□□□□□ -0.28
DDX56-209ENST00000473924 TOP6BLQ8N6T0 577 aa13.32□□□□□ -0.28
DDX56-209ENST00000473924 FBXL13Q8NEE6 735 aa13.32□□□□□ -0.28
DDX56-209ENST00000473924 TAS1R2Q8TE23 839 aa13.32□□□□□ -0.28
DDX56-209ENST00000473924 TAF4BQ92750 862 aa13.32□□□□□ -0.28
DDX56-209ENST00000473924 SLC35C1Q96A29 364 aa13.32□□□□□ -0.28
DDX56-209ENST00000473924 CNOT6LQ96LI5 555 aaKnown RBP13.32□□□□□ -0.28
DDX56-209ENST00000473924 MED15Q96RN5 788 aa13.32□□□□□ -0.28
DDX56-209ENST00000473924 MAN1C1Q9NR34 630 aa13.32□□□□□ -0.28
DDX56-209ENST00000473924 CLEC1BQ9P126 229 aa13.32□□□□□ -0.28
DDX56-209ENST00000473924 MAGEC2Q9UBF1 373 aaPredicted RBP13.32□□□□□ -0.28
DDX56-209ENST00000473924 L1RE1Q9UN81 338 aa13.32□□□□□ -0.28
DDX56-209ENST00000473924 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.32□□□□□ -0.28
DDX56-209ENST00000473924 TBC1D4O60343 1298 aa13.31□□□□□ -0.28
DDX56-209ENST00000473924 C1RP00736 705 aa13.31□□□□□ -0.28
DDX56-209ENST00000473924 HOXB8P17481 243 aaPredicted RBP13.31□□□□□ -0.28
DDX56-209ENST00000473924 ELF1P32519 619 aa13.31□□□□□ -0.28
DDX56-209ENST00000473924 MTIF2P46199 727 aaKnown RBP13.31□□□□□ -0.28
DDX56-209ENST00000473924 LHX1P48742 406 aa13.31□□□□□ -0.28
DDX56-209ENST00000473924 MARSP56192 900 aaKnown RBP13.31□□□□□ -0.28
DDX56-209ENST00000473924 MCCD1P59942 119 aaPredicted RBP13.31□□□□□ -0.28
DDX56-209ENST00000473924 MYL7Q01449 175 aa13.31□□□□□ -0.28
DDX56-209ENST00000473924 ROR1Q01973 937 aa13.31□□□□□ -0.28
DDX56-209ENST00000473924 CETN1Q12798 172 aa13.31□□□□□ -0.28
DDX56-209ENST00000473924 NFKBIBQ15653 356 aa13.31□□□□□ -0.28
DDX56-209ENST00000473924 CBWD6Q4V339 395 aa13.31□□□□□ -0.28
DDX56-209ENST00000473924 WDR44Q5JSH3 913 aa13.31□□□□□ -0.28
DDX56-209ENST00000473924 CBWD3Q5JTY5 395 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms