RNA–Protein interactions for RNA: ENST00000473820.1

PPP2R1A-208, Transcript of protein phosphatase 2 scaffold subunit Aalpha, human

TSL 2

Gene PPP2R1A, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP2R1A-208	ENST00000473820	ATXN1	P54253	815 aa	Known RBP	10.8	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	YARS	P54577	528 aa	Known RBP	10.8	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	GPC5	P78333	572 aa		10.8	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	ASIC1	P78348	528 aa		10.8	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	GTF2B	Q00403	316 aa		10.8	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	CSTF1	Q05048	431 aa	Known RBP	10.8	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	TPD52L1	Q16890	204 aa	Predicted RBP	10.8	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	SEZ6	Q53EL9	994 aa		10.8	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	CDKAL1	Q5VV42	579 aa		10.8	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	SPECC1L	Q69YQ0	1117 aa		10.8	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	CNNM4	Q6P4Q7	775 aa		10.8	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	MPZL3	Q6UWV2	235 aa		10.8	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	ZPBP2	Q6X784	338 aa		10.8	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	TAS1R1	Q7RTX1	841 aa		10.8	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	TMC6	Q7Z403	805 aa		10.8	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	GLYCTK	Q8IVS8	523 aa		10.8	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	SUMF1	Q8NBK3	374 aa		10.8	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	PJA1	Q8NG27	643 aa		10.8	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	DHTKD1	Q96HY7	919 aa	Predicted RBP	10.8	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	FIZ1	Q96SL8	496 aa		10.8	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	C7orf25	Q9BPX7	421 aa		10.8	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	HERC2P3	Q9BVR0	1158 aa		10.8	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	CCDC94	Q9BW85	323 aa	Predicted RBP	10.8	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	COLEC11	Q9BWP8	271 aa		10.8	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	TRIM9	Q9C026	710 aa		10.8	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	CXCL16	Q9H2A7	254 aa		10.8	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	PLEKHA4	Q9H4M7	779 aa		10.8	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	SLC2A4RG	Q9NR83	387 aa		10.8	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	SEL1L	Q9UBV2	794 aa		10.8	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	CDV3	Q9UKY7	258 aa	Known RBP	10.8	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	PCDHB13	Q9Y5F0	798 aa		10.8	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	NUMBL	Q9Y6R0	609 aa		10.8	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	C2orf16	Q68DN1	1984 aa		10.79	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	ACACB	O00763	2458 aa		10.79	□□□□□ -0.68
PPP2R1A-208	ENST00000473820		A0A1B0GTH6	734 aa		10.79	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	PVALEF	A0A1B0GWK0	134 aa		10.79	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	KANSL1L	A0AUZ9	987 aa		10.79	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	BICDL2	A1A5D9	508 aa		10.79	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	FAM170B	A6NMN3	283 aa		10.79	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	PRR5-ARHGAP8	B1AHC4	643 aa		10.79	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	PPP1R3G	B7ZBB8	358 aa		10.79	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	TULP1	O00294	542 aa	Predicted RBP	10.79	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	PSMA7	O14818	248 aa		10.79	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	SPTLC1	O15269	473 aa		10.79	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	LRRN2	O75325	713 aa		10.79	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	RHOBTB3	O94955	611 aa		10.79	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	TH	P07101	528 aa		10.79	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	TPM1	P09493	284 aa		10.79	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	SCP2	P22307	547 aa		10.79	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	PROZ	P22891	400 aa		10.79	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	FSHR	P23945	695 aa		10.79	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	ABCD1	P33897	745 aa		10.79	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	GRM5	P41594	1212 aa		10.79	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	STARD6	P59095	220 aa		10.79	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	ARHGAP8	P85298	464 aa		10.79	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	PAK1	Q13153	545 aa		10.79	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	TRIM14	Q14142	442 aa		10.79	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	UBXN2B	Q14CS0	331 aa		10.79	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	ZNF528	Q3MIS6	628 aa		10.79	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	ISM2	Q6H9L7	571 aa		10.79	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	MTERF4	Q7Z6M4	381 aa	Known RBP	10.79	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	FAM114A1	Q8IWE2	563 aa		10.79	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	GRAMD1C	Q8IYS0	662 aa		10.79	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	GSTCD	Q8NEC7	633 aa		10.79	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	HDAC7	Q8WUI4	952 aa		10.79	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	RABGGTA	Q92696	567 aa		10.79	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	HPS3	Q969F9	1004 aa		10.79	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	IQCD	Q96DY2	449 aa		10.79	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	ACAP3	Q96P50	834 aa		10.79	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	NAA15	Q9BXJ9	866 aa	Known RBP	10.79	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	RHOBTB2	Q9BYZ6	727 aa		10.79	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	PRKD2	Q9BZL6	878 aa		10.79	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	DLGAP2	Q9P1A6	1054 aa		10.79	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	USP18	Q9UMW8	372 aa		10.79	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	R3HCC1	Q9Y3T6	440 aa	Known RBP	10.79	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	10.79	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	ITIH6	Q6UXX5	1313 aa		10.79	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	DENND4A	Q7Z401	1863 aa		10.78	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	DCDC2B	A2VCK2	349 aa		10.78	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	ANKRD63	C9JTQ0	380 aa		10.78	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	ABLIM1	O14639	778 aa		10.78	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	PTGES	O14684	152 aa		10.78	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	ARHGAP6	O43182	974 aa		10.78	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	ZSCAN12	O43309	604 aa		10.78	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	TGM5	O43548	720 aa		10.78	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	ATP1A3	P13637	1013 aa		10.78	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	GLUL	P15104	373 aa		10.78	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	EEF1G	P26641	437 aa	Known RBP	10.78	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	CASP5	P51878	434 aa		10.78	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	CCZ1B	P86790	482 aa		10.78	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	CCZ1	P86791	482 aa	Predicted RBP	10.78	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	LMNB2	Q03252	620 aa		10.78	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	MCL1	Q07820	350 aa		10.78	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	KCNA1	Q09470	495 aa		10.78	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	GRIK3	Q13003	919 aa		10.78	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	PSMD2	Q13200	908 aa		10.78	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	HTR4	Q13639	388 aa		10.78	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	NR1I3	Q14994	352 aa		10.78	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	SLC44A4	Q53GD3	710 aa		10.78	□□□□□ -0.68
PPP2R1A-208	ENST00000473820	GLRA4	Q5JXX5	417 aa		10.78	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 52 ms