RNA–Protein interactions for RNA: ENST00000473542.1

BBX-223, Transcript of BBX, HMG-box containing, human

TSL 3

Gene BBX, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBX-223	ENST00000473542	DMTF1	Q9Y222	760 aa		5.74	□□□□□ -1.49
BBX-223	ENST00000473542	RUVBL1	Q9Y265	456 aa	Known RBP	5.74	□□□□□ -1.49
BBX-223	ENST00000473542	ABHD14A-ACY1	A0A1B0GW23	586 aa		5.73	□□□□□ -1.49
BBX-223	ENST00000473542	TBX3	O15119	743 aa		5.73	□□□□□ -1.49
BBX-223	ENST00000473542	POMC	P01189	267 aa		5.73	□□□□□ -1.49
BBX-223	ENST00000473542	KIT	P10721	976 aa		5.73	□□□□□ -1.49
BBX-223	ENST00000473542	ACRV1	P26436	265 aa		5.73	□□□□□ -1.49
BBX-223	ENST00000473542	ZNF543	Q08ER8	600 aa		5.73	□□□□□ -1.49
BBX-223	ENST00000473542	FOXL1	Q12952	345 aa		5.73	□□□□□ -1.49
BBX-223	ENST00000473542	FKBP15	Q5T1M5	1219 aa		5.73	□□□□□ -1.49
BBX-223	ENST00000473542	ZNF627	Q7L945	461 aa		5.73	□□□□□ -1.49
BBX-223	ENST00000473542	OR6B3	Q8NGW1	331 aa		5.73	□□□□□ -1.49
BBX-223	ENST00000473542	SLC35B2	Q8TB61	432 aa		5.73	□□□□□ -1.49
BBX-223	ENST00000473542	BRI3BP	Q8WY22	251 aa		5.73	□□□□□ -1.49
BBX-223	ENST00000473542	ARPC5L	Q9BPX5	153 aa		5.73	□□□□□ -1.49
BBX-223	ENST00000473542	C1orf43	Q9BWL3	253 aa		5.73	□□□□□ -1.49
BBX-223	ENST00000473542	MMRN2	Q9H8L6	949 aa		5.73	□□□□□ -1.49
BBX-223	ENST00000473542	BRD9	Q9H8M2	597 aa		5.73	□□□□□ -1.49
BBX-223	ENST00000473542	GPR35	Q9HC97	309 aa		5.73	□□□□□ -1.49
BBX-223	ENST00000473542	PNPLA8	Q9NP80	782 aa		5.73	□□□□□ -1.49
BBX-223	ENST00000473542	HECA	Q9UBI9	543 aa	Predicted RBP	5.73	□□□□□ -1.49
BBX-223	ENST00000473542	AFF4	Q9UHB7	1163 aa	Known RBP	5.73	□□□□□ -1.49
BBX-223	ENST00000473542	CPA4	Q9UI42	421 aa		5.73	□□□□□ -1.49
BBX-223	ENST00000473542	DAAM1	Q9Y4D1	1078 aa		5.73	□□□□□ -1.49
BBX-223	ENST00000473542	USP19	O94966	1318 aa		5.73	□□□□□ -1.49
BBX-223	ENST00000473542	PNPLA7	Q6ZV29	1317 aa		5.73	□□□□□ -1.49
BBX-223	ENST00000473542	PRSS29P	A6NIE9	313 aa		5.72	□□□□□ -1.49
BBX-223	ENST00000473542	IPO13	O94829	963 aa	Known RBP	5.72	□□□□□ -1.49
BBX-223	ENST00000473542	IL18RAP	O95256	599 aa		5.72	□□□□□ -1.49
BBX-223	ENST00000473542	CHEK2	O96017	543 aa		5.72	□□□□□ -1.49
BBX-223	ENST00000473542	AHSG	P02765	367 aa		5.72	□□□□□ -1.49
BBX-223	ENST00000473542	RARB	P10826	455 aa		5.72	□□□□□ -1.49
BBX-223	ENST00000473542	BRAF	P15056	766 aa		5.72	□□□□□ -1.49
BBX-223	ENST00000473542	GNAT2	P19087	354 aa		5.72	□□□□□ -1.49
BBX-223	ENST00000473542	MGAT1	P26572	445 aa		5.72	□□□□□ -1.49
BBX-223	ENST00000473542	MXRA7	P84157	204 aa		5.72	□□□□□ -1.49
BBX-223	ENST00000473542	DAG1	Q14118	895 aa		5.72	□□□□□ -1.49
BBX-223	ENST00000473542	GRM7	Q14831	915 aa		5.72	□□□□□ -1.49
BBX-223	ENST00000473542	UBXN2B	Q14CS0	331 aa		5.72	□□□□□ -1.49
BBX-223	ENST00000473542	C10orf62	Q5T681	223 aa	Predicted RBP	5.72	□□□□□ -1.49
BBX-223	ENST00000473542	IZUMO3	Q5VZ72	239 aa		5.72	□□□□□ -1.49
BBX-223	ENST00000473542	ZNF529	Q6P280	563 aa		5.72	□□□□□ -1.49
BBX-223	ENST00000473542	ZNF783	Q6ZMS7	281 aa		5.72	□□□□□ -1.49
BBX-223	ENST00000473542	TNPO1	Q92973	898 aa	Known RBP	5.72	□□□□□ -1.49
BBX-223	ENST00000473542	RIPOR3	Q96MK2	946 aa		5.72	□□□□□ -1.49
BBX-223	ENST00000473542	MYOC	Q99972	504 aa		5.72	□□□□□ -1.49
BBX-223	ENST00000473542	LSM14B	Q9BX40	385 aa	Known RBP	5.72	□□□□□ -1.49
BBX-223	ENST00000473542	SIK2	Q9H0K1	926 aa		5.72	□□□□□ -1.49
BBX-223	ENST00000473542	EPC1	Q9H2F5	836 aa		5.72	□□□□□ -1.49
BBX-223	ENST00000473542	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	5.72	□□□□□ -1.49
BBX-223	ENST00000473542	PLA2G3	Q9NZ20	509 aa		5.72	□□□□□ -1.49
BBX-223	ENST00000473542	HDAC5	Q9UQL6	1122 aa		5.72	□□□□□ -1.49
BBX-223	ENST00000473542	SNX13	Q9Y5W8	968 aa		5.72	□□□□□ -1.49
BBX-223	ENST00000473542	PRR5-ARHGAP8	B1AHC4	643 aa		5.71	□□□□□ -1.5
BBX-223	ENST00000473542	KIAA0391	O15091	583 aa	Known RBP	5.71	□□□□□ -1.5
BBX-223	ENST00000473542	MFAP3L	O75121	409 aa		5.71	□□□□□ -1.5
BBX-223	ENST00000473542	STC2	O76061	302 aa		5.71	□□□□□ -1.5
BBX-223	ENST00000473542	GNAI2	P04899	355 aa		5.71	□□□□□ -1.5
BBX-223	ENST00000473542	GJB1	P08034	283 aa		5.71	□□□□□ -1.5
BBX-223	ENST00000473542	SBK3	P0C264	359 aa		5.71	□□□□□ -1.5
BBX-223	ENST00000473542	MSX2	P35548	267 aa	Predicted RBP	5.71	□□□□□ -1.5
BBX-223	ENST00000473542	INHBC	P55103	352 aa		5.71	□□□□□ -1.5
BBX-223	ENST00000473542	SUMO3	P55854	103 aa	Predicted RBP	5.71	□□□□□ -1.5
BBX-223	ENST00000473542	TUBA3C	Q13748	450 aa		5.71	□□□□□ -1.5
BBX-223	ENST00000473542	SLC44A4	Q53GD3	710 aa		5.71	□□□□□ -1.5
BBX-223	ENST00000473542	DCAF17	Q5H9S7	520 aa	Predicted RBP	5.71	□□□□□ -1.5
BBX-223	ENST00000473542	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	5.71	□□□□□ -1.5
BBX-223	ENST00000473542	XRRA1	Q6P2D8	792 aa		5.71	□□□□□ -1.5
BBX-223	ENST00000473542	TUBA3E	Q6PEY2	450 aa		5.71	□□□□□ -1.5
BBX-223	ENST00000473542	PCSK4	Q6UW60	755 aa		5.71	□□□□□ -1.5
BBX-223	ENST00000473542	TSHZ1	Q6ZSZ6	1077 aa		5.71	□□□□□ -1.5
BBX-223	ENST00000473542	SESTD1	Q86VW0	696 aa		5.71	□□□□□ -1.5
BBX-223	ENST00000473542	MDGA1	Q8NFP4	955 aa		5.71	□□□□□ -1.5
BBX-223	ENST00000473542	ST8SIA2	Q92186	375 aa		5.71	□□□□□ -1.5
BBX-223	ENST00000473542	SCAMP4	Q969E2	229 aa		5.71	□□□□□ -1.5
BBX-223	ENST00000473542	FAM89A	Q96GI7	184 aa		5.71	□□□□□ -1.5
BBX-223	ENST00000473542	AGAP2	Q99490	1192 aa		5.71	□□□□□ -1.5
BBX-223	ENST00000473542	TRMT13	Q9NUP7	481 aa	Known RBP	5.71	□□□□□ -1.5
BBX-223	ENST00000473542	TCRBV7S2A1N4T	A0A589	114 aa		5.7	□□□□□ -1.5
BBX-223	ENST00000473542	TRIM43B	A6NCK2	446 aa		5.7	□□□□□ -1.5
BBX-223	ENST00000473542	ABHD16A	O95870	558 aa		5.7	□□□□□ -1.5
BBX-223	ENST00000473542	TSHR	P16473	764 aa		5.7	□□□□□ -1.5
BBX-223	ENST00000473542	HDC	P19113	662 aa		5.7	□□□□□ -1.5
BBX-223	ENST00000473542	TNFSF4	P23510	183 aa		5.7	□□□□□ -1.5
BBX-223	ENST00000473542	SLC6A4	P31645	630 aa		5.7	□□□□□ -1.5
BBX-223	ENST00000473542	STT3A	P46977	705 aa		5.7	□□□□□ -1.5
BBX-223	ENST00000473542	POU6F2	P78424	691 aa	Predicted RBP	5.7	□□□□□ -1.5
BBX-223	ENST00000473542	EXOSC9	Q06265	439 aa	Known RBP	5.7	□□□□□ -1.5
BBX-223	ENST00000473542	TCF15	Q12870	199 aa		5.7	□□□□□ -1.5
BBX-223	ENST00000473542	FAM214A	Q32MH5	1076 aa		5.7	□□□□□ -1.5
BBX-223	ENST00000473542	FAM83B	Q5T0W9	1011 aa		5.7	□□□□□ -1.5
BBX-223	ENST00000473542	ANKS6	Q68DC2	871 aa		5.7	□□□□□ -1.5
BBX-223	ENST00000473542	EFCAB12	Q6NXP0	572 aa		5.7	□□□□□ -1.5
BBX-223	ENST00000473542	FITM2	Q8N6M3	262 aa		5.7	□□□□□ -1.5
BBX-223	ENST00000473542	RNF152	Q8N8N0	203 aa		5.7	□□□□□ -1.5
BBX-223	ENST00000473542	OR52N2	Q8NGI0	321 aa		5.7	□□□□□ -1.5
BBX-223	ENST00000473542	TFAP2C	Q92754	450 aa		5.7	□□□□□ -1.5
BBX-223	ENST00000473542	TRIM43	Q96BQ3	446 aa	Predicted RBP	5.7	□□□□□ -1.5
BBX-223	ENST00000473542	P2RX7	Q99572	595 aa	Known RBP	5.7	□□□□□ -1.5
BBX-223	ENST00000473542	CPPED1	Q9BRF8	314 aa	Predicted RBP	5.7	□□□□□ -1.5

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