RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 TXLNBQ8N3L3 684 aa6.51□□□□□ -1.37
RTF1-203ENST00000473214 TMEM145Q8NBT3 493 aa6.51□□□□□ -1.37
RTF1-203ENST00000473214 KIAA1524Q8TCG1 905 aa6.51□□□□□ -1.37
RTF1-203ENST00000473214 SSH1Q8WYL5 1049 aa6.51□□□□□ -1.37
RTF1-203ENST00000473214 GATA6Q92908 595 aa6.51□□□□□ -1.37
RTF1-203ENST00000473214 CALML4Q96GE6 196 aa6.51□□□□□ -1.37
RTF1-203ENST00000473214 VPS39Q96JC1 886 aa6.51□□□□□ -1.37
RTF1-203ENST00000473214 ZC3H10Q96K80 434 aaKnown RBP6.51□□□□□ -1.37
RTF1-203ENST00000473214 CNDP1Q96KN2 507 aa6.51□□□□□ -1.37
RTF1-203ENST00000473214 NOX5Q96PH1 765 aa6.51□□□□□ -1.37
RTF1-203ENST00000473214 SLC2A13Q96QE2 648 aa6.51□□□□□ -1.37
RTF1-203ENST00000473214 KRTAP4-11Q9BYQ6 195 aa6.51□□□□□ -1.37
RTF1-203ENST00000473214 BHLHE41Q9C0J9 482 aaPredicted RBP6.51□□□□□ -1.37
RTF1-203ENST00000473214 MS4A5Q9H3V2 200 aa6.51□□□□□ -1.37
RTF1-203ENST00000473214 PICK1Q9NRD5 415 aa6.51□□□□□ -1.37
RTF1-203ENST00000473214 TBCCD1Q9NVR7 557 aa6.51□□□□□ -1.37
RTF1-203ENST00000473214 PCOLCE2Q9UKZ9 415 aa6.51□□□□□ -1.37
RTF1-203ENST00000473214 TMEM5Q9Y2B1 443 aa6.51□□□□□ -1.37
RTF1-203ENST00000473214 KIF3AQ9Y496 699 aa6.51□□□□□ -1.37
RTF1-203ENST00000473214 AP1M2Q9Y6Q5 423 aa6.51□□□□□ -1.37
RTF1-203ENST00000473214 CCDC141Q6ZP82 1450 aa6.51□□□□□ -1.37
RTF1-203ENST00000473214 CHD2O14647 1828 aaKnown RBP6.5□□□□□ -1.37
RTF1-203ENST00000473214 BCL9LQ86UU0 1499 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 FYCO1Q9BQS8 1478 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 PNPLA6Q8IY17 1366 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 LINC00854A0A1B0GVQ3 168 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 KRT87PA6NCN2 255 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 GFRA2O00451 464 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 TSC22D2O75157 780 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 GJB3O75712 270 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 IL18RAPO95256 599 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 PDHA1P08559 390 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 SNRPB2P08579 225 aaKnown RBP6.5□□□□□ -1.37
RTF1-203ENST00000473214 SRGAP2CP0DJJ0 459 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 RARBP10826 455 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 ESRRAP11474 423 aaPredicted RBP6.5□□□□□ -1.37
RTF1-203ENST00000473214 GZMAP12544 262 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 LSP1P33241 339 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 NNMTP40261 264 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 CCR9P51686 369 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 TKTL1P51854 596 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 VAMP2P63027 116 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 SOX4Q06945 474 aaPredicted RBP6.5□□□□□ -1.37
RTF1-203ENST00000473214 SMAD4Q13485 552 aaKnown RBP6.5□□□□□ -1.37
RTF1-203ENST00000473214 ACVR2BQ13705 512 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 DAG1Q14118 895 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 EIF4A2Q14240 407 aaKnown RBP6.5□□□□□ -1.37
RTF1-203ENST00000473214 SNX17Q15036 470 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 CTXN3Q4LDR2 81 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 ANKRD39Q53RE8 183 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 TOR2AQ5JU69 321 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 STYK1Q6J9G0 422 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 IYDQ6PHW0 289 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 KCNT2Q6UVM3 1135 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 CDC37L1Q7L3B6 337 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 ZNF804AQ7Z570 1209 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 PRPF39Q86UA1 669 aaKnown RBP6.5□□□□□ -1.37
RTF1-203ENST00000473214 TMEM192Q8IY95 271 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 RNF152Q8N8N0 203 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 IL17RDQ8NFM7 739 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 SPPL3Q8TCT6 385 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 CREB3L4Q8TEY5 395 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 RIN2Q8WYP3 895 aaPredicted RBP6.5□□□□□ -1.37
RTF1-203ENST00000473214 KRT35Q92764 455 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 BRF1Q92994 677 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 EXOC4Q96A65 974 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 TBC1D32Q96NH3 1257 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 AGAP3Q96P47 875 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 PPP1R9BQ96SB3 815 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 HEPHQ9BQS7 1158 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 BRIP1Q9BX63 1249 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 NRSN2Q9GZP1 204 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 ZCWPW1Q9H0M4 648 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 LIN28AQ9H9Z2 209 aaKnown RBP6.5□□□□□ -1.37
RTF1-203ENST00000473214 ZNF287Q9HBT7 754 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 ADPRHL2Q9NX46 363 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 CHCHD3Q9NX63 227 aaKnown RBP6.5□□□□□ -1.37
RTF1-203ENST00000473214 AIPL1Q9NZN9 384 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 TUBD1Q9UJT1 453 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 OGDHLQ9ULD0 1010 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 EMC9Q9Y3B6 208 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 NHSL1Q5SYE7 1610 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 EFCAB6Q5THR3 1501 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 ASXL1Q8IXJ9 1541 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 EEA1Q15075 1411 aa6.5□□□□□ -1.37
RTF1-203ENST00000473214 A0A0B4J269 797 aa6.49□□□□□ -1.37
RTF1-203ENST00000473214 A8MVJ9 347 aa6.49□□□□□ -1.37
RTF1-203ENST00000473214 CHURC1-FNTBB4DL54 471 aa6.49□□□□□ -1.37
RTF1-203ENST00000473214 GTPBP1O00178 669 aaKnown RBP6.49□□□□□ -1.37
RTF1-203ENST00000473214 SPTLC2O15270 562 aa6.49□□□□□ -1.37
RTF1-203ENST00000473214 ZBTB14O43829 449 aa6.49□□□□□ -1.37
RTF1-203ENST00000473214 FMO6PO60774 539 aa6.49□□□□□ -1.37
RTF1-203ENST00000473214 CLASP2O75122 1294 aaKnown RBP6.49□□□□□ -1.37
RTF1-203ENST00000473214 ERAL1O75616 437 aaKnown RBP6.49□□□□□ -1.37
RTF1-203ENST00000473214 BEST1O76090 585 aa6.49□□□□□ -1.37
RTF1-203ENST00000473214 KCNH1O95259 989 aa6.49□□□□□ -1.37
RTF1-203ENST00000473214 MMEP08473 750 aa6.49□□□□□ -1.37
RTF1-203ENST00000473214 ACADMP11310 421 aa6.49□□□□□ -1.37
RTF1-203ENST00000473214 FERP16591 822 aa6.49□□□□□ -1.37
RTF1-203ENST00000473214 ADSLP30566 484 aaPredicted RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms