RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 ZNF341Q9BYN7 854 aa7.11□□□□□ -1.27
CLK1-209ENST00000472679 GEMIN8Q9NWZ8 242 aaKnown RBP7.11□□□□□ -1.27
CLK1-209ENST00000472679 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.11□□□□□ -1.27
CLK1-209ENST00000472679 CTTNBP2NLQ9P2B4 639 aa7.11□□□□□ -1.27
CLK1-209ENST00000472679 FZD1Q9UP38 647 aa7.11□□□□□ -1.27
CLK1-209ENST00000472679 UNC119BA6NIH7 251 aa7.1□□□□□ -1.27
CLK1-209ENST00000472679 NPIPB8E9PQR5 432 aa7.1□□□□□ -1.27
CLK1-209ENST00000472679 PHGDHO43175 533 aaKnown RBP7.1□□□□□ -1.27
CLK1-209ENST00000472679 LAG3P18627 525 aa7.1□□□□□ -1.27
CLK1-209ENST00000472679 KCNJ5P48544 419 aa7.1□□□□□ -1.27
CLK1-209ENST00000472679 TBX4P57082 545 aa7.1□□□□□ -1.27
CLK1-209ENST00000472679 FOXR2Q6PJQ5 311 aa7.1□□□□□ -1.27
CLK1-209ENST00000472679 RHOUQ7L0Q8 258 aa7.1□□□□□ -1.27
CLK1-209ENST00000472679 FAM43AQ8N2R8 423 aa7.1□□□□□ -1.27
CLK1-209ENST00000472679 ANKS1AQ92625 1134 aa7.1□□□□□ -1.27
CLK1-209ENST00000472679 RNF31Q96EP0 1072 aa7.1□□□□□ -1.27
CLK1-209ENST00000472679 MLST8Q9BVC4 326 aa7.1□□□□□ -1.27
CLK1-209ENST00000472679 DDX21Q9NR30 783 aaKnown RBP eCLIP7.1□□□□□ -1.27
CLK1-209ENST00000472679 CNNM1Q9NRU3 951 aa7.1□□□□□ -1.27
CLK1-209ENST00000472679 PIH1D1Q9NWS0 290 aaKnown RBP7.1□□□□□ -1.27
CLK1-209ENST00000472679 ETAA1Q9NY74 926 aa7.1□□□□□ -1.27
CLK1-209ENST00000472679 MTO1Q9Y2Z2 717 aaKnown RBP7.1□□□□□ -1.27
CLK1-209ENST00000472679 REXO2Q9Y3B8 237 aaKnown RBP7.1□□□□□ -1.27
CLK1-209ENST00000472679 PCDHGB6Q9Y5F9 930 aa7.1□□□□□ -1.27
CLK1-209ENST00000472679 CENPVL1A0A0U1RR11 272 aa7.09□□□□□ -1.27
CLK1-209ENST00000472679 TMEM200CA6NKL6 621 aa7.09□□□□□ -1.27
CLK1-209ENST00000472679 M0QYG6 137 aa7.09□□□□□ -1.27
CLK1-209ENST00000472679 PRC1O43663 620 aa7.09□□□□□ -1.27
CLK1-209ENST00000472679 VPS4BO75351 444 aa7.09□□□□□ -1.27
CLK1-209ENST00000472679 ERN1O75460 977 aaKnown RBP7.09□□□□□ -1.27
CLK1-209ENST00000472679 GNAI2P04899 355 aa7.09□□□□□ -1.27
CLK1-209ENST00000472679 DDX6P26196 483 aaKnown RBP eCLIP7.09□□□□□ -1.27
CLK1-209ENST00000472679 MC2RQ01718 297 aa7.09□□□□□ -1.27
CLK1-209ENST00000472679 TIGD2Q4W5G0 525 aa7.09□□□□□ -1.27
CLK1-209ENST00000472679 PPP4R4Q6NUP7 873 aa7.09□□□□□ -1.27
CLK1-209ENST00000472679 TAPT1Q6NXT6 567 aa7.09□□□□□ -1.27
CLK1-209ENST00000472679 DARS2Q6PI48 645 aaKnown RBP7.09□□□□□ -1.27
CLK1-209ENST00000472679 SLC30A10Q6XR72 485 aa7.09□□□□□ -1.27
CLK1-209ENST00000472679 MRGPREQ86SM8 312 aa7.09□□□□□ -1.27
CLK1-209ENST00000472679 LRTOMTQ8WZ04 291 aa7.09□□□□□ -1.27
CLK1-209ENST00000472679 HAS1Q92839 578 aa7.09□□□□□ -1.27
CLK1-209ENST00000472679 LENG9Q96B70 501 aa7.09□□□□□ -1.27
CLK1-209ENST00000472679 TRIB1Q96RU8 372 aa7.09□□□□□ -1.27
CLK1-209ENST00000472679 ALOXE3Q9BYJ1 711 aa7.09□□□□□ -1.27
CLK1-209ENST00000472679 TRIM54Q9BYV2 358 aa7.09□□□□□ -1.27
CLK1-209ENST00000472679 MMRN2Q9H8L6 949 aa7.09□□□□□ -1.27
CLK1-209ENST00000472679 RNF181Q9P0P0 153 aa7.09□□□□□ -1.27
CLK1-209ENST00000472679 KCNE5Q9UJ90 142 aa7.09□□□□□ -1.27
CLK1-209ENST00000472679 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.09□□□□□ -1.27
CLK1-209ENST00000472679 MYO1FO00160 1098 aa7.08□□□□□ -1.28
CLK1-209ENST00000472679 TBX3O15119 743 aa7.08□□□□□ -1.28
CLK1-209ENST00000472679 NARSO43776 548 aaKnown RBP7.08□□□□□ -1.28
CLK1-209ENST00000472679 UNC5CO95185 931 aa7.08□□□□□ -1.28
CLK1-209ENST00000472679 SPDEFO95238 335 aa7.08□□□□□ -1.28
CLK1-209ENST00000472679 FDXRP22570 491 aa7.08□□□□□ -1.28
CLK1-209ENST00000472679 SLC7A1P30825 629 aa7.08□□□□□ -1.28
CLK1-209ENST00000472679 BMPR1AP36894 532 aa7.08□□□□□ -1.28
CLK1-209ENST00000472679 TOB1P50616 345 aaPredicted RBP7.08□□□□□ -1.28
CLK1-209ENST00000472679 ARFIP2P53365 341 aa7.08□□□□□ -1.28
CLK1-209ENST00000472679 FAM193AP78312 1265 aa7.08□□□□□ -1.28
CLK1-209ENST00000472679 POU6F2P78424 691 aaPredicted RBP7.08□□□□□ -1.28
CLK1-209ENST00000472679 ZNF844Q08AG5 666 aa7.08□□□□□ -1.28
CLK1-209ENST00000472679 TCF15Q12870 199 aa7.08□□□□□ -1.28
CLK1-209ENST00000472679 SEMA5AQ13591 1074 aa7.08□□□□□ -1.28
CLK1-209ENST00000472679 TP53BP2Q13625 1128 aa7.08□□□□□ -1.28
CLK1-209ENST00000472679 BOP1Q14137 746 aaKnown RBP7.08□□□□□ -1.28
CLK1-209ENST00000472679 CYP2A13Q16696 494 aa7.08□□□□□ -1.28
CLK1-209ENST00000472679 GEN1Q17RS7 908 aa7.08□□□□□ -1.28
CLK1-209ENST00000472679 CCDC181Q5TID7 509 aa7.08□□□□□ -1.28
CLK1-209ENST00000472679 CRIP3Q6Q6R5 217 aa7.08□□□□□ -1.28
CLK1-209ENST00000472679 PPP1R32Q7Z5V6 425 aa7.08□□□□□ -1.28
CLK1-209ENST00000472679 Q8N1X5 172 aa7.08□□□□□ -1.28
CLK1-209ENST00000472679 MED15Q96RN5 788 aa7.08□□□□□ -1.28
CLK1-209ENST00000472679 KRTAP9-3Q9BYQ3 159 aa7.08□□□□□ -1.28
CLK1-209ENST00000472679 ANKFY1Q9P2R3 1169 aa7.08□□□□□ -1.28
CLK1-209ENST00000472679 FAM50BQ9Y247 325 aa7.08□□□□□ -1.28
CLK1-209ENST00000472679 MED16Q9Y2X0 877 aa7.08□□□□□ -1.28
CLK1-209ENST00000472679 HS3ST4Q9Y661 456 aa7.08□□□□□ -1.28
CLK1-209ENST00000472679 CCDC195A0A1B0GUA6 201 aa7.07□□□□□ -1.28
CLK1-209ENST00000472679 POLRMTO00411 1230 aaKnown RBP7.07□□□□□ -1.28
CLK1-209ENST00000472679 GOLIM4O00461 696 aa7.07□□□□□ -1.28
CLK1-209ENST00000472679 SUN1O94901 812 aa7.07□□□□□ -1.28
CLK1-209ENST00000472679 CHEK2O96017 543 aa7.07□□□□□ -1.28
CLK1-209ENST00000472679 HLA-DOAP06340 250 aa7.07□□□□□ -1.28
CLK1-209ENST00000472679 KCNA2P16389 499 aa7.07□□□□□ -1.28
CLK1-209ENST00000472679 CHRM3P20309 590 aa7.07□□□□□ -1.28
CLK1-209ENST00000472679 PEX2P28328 305 aa7.07□□□□□ -1.28
CLK1-209ENST00000472679 CACNB3P54284 484 aa7.07□□□□□ -1.28
CLK1-209ENST00000472679 PIGFQ07326 219 aa7.07□□□□□ -1.28
CLK1-209ENST00000472679 FAM46DQ8NEK8 389 aa7.07□□□□□ -1.28
CLK1-209ENST00000472679 FBXO41Q8TF61 875 aa7.07□□□□□ -1.28
CLK1-209ENST00000472679 BOD1Q96IK1 185 aa7.07□□□□□ -1.28
CLK1-209ENST00000472679 CCDC136Q96JN2 1154 aa7.07□□□□□ -1.28
CLK1-209ENST00000472679 SMOQ99835 787 aa7.07□□□□□ -1.28
CLK1-209ENST00000472679 CNPPD1Q9BV87 410 aa7.07□□□□□ -1.28
CLK1-209ENST00000472679 SARGQ9BW04 601 aa7.07□□□□□ -1.28
CLK1-209ENST00000472679 APOL5Q9BWW9 433 aa7.07□□□□□ -1.28
CLK1-209ENST00000472679 SMOC2Q9H3U7 446 aa7.07□□□□□ -1.28
CLK1-209ENST00000472679 CPNE7Q9UBL6 633 aa7.07□□□□□ -1.28
CLK1-209ENST00000472679 TPCN1Q9ULQ1 816 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms