RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 NXPH1P58417 271 aa6.22□□□□□ -1.41
CD46-213ENST00000471987 MC2RQ01718 297 aa6.22□□□□□ -1.41
CD46-213ENST00000471987 ITIH3Q06033 890 aa6.22□□□□□ -1.41
CD46-213ENST00000471987 ITKQ08881 620 aa6.22□□□□□ -1.41
CD46-213ENST00000471987 FOXF2Q12947 444 aa6.22□□□□□ -1.41
CD46-213ENST00000471987 MTMR1Q13613 665 aa6.22□□□□□ -1.41
CD46-213ENST00000471987 TAPT1Q6NXT6 567 aa6.22□□□□□ -1.41
CD46-213ENST00000471987 TMPRSS9Q7Z410 1059 aa6.22□□□□□ -1.41
CD46-213ENST00000471987 TTC7BQ86TV6 843 aa6.22□□□□□ -1.41
CD46-213ENST00000471987 B3GALNT2Q8NCR0 500 aa6.22□□□□□ -1.41
CD46-213ENST00000471987 KAT5Q92993 513 aa6.22□□□□□ -1.41
CD46-213ENST00000471987 DMRTA2Q96SC8 542 aa6.22□□□□□ -1.41
CD46-213ENST00000471987 SMOQ99835 787 aa6.22□□□□□ -1.41
CD46-213ENST00000471987 SIDT1Q9NXL6 827 aaKnown RBP6.22□□□□□ -1.41
CD46-213ENST00000471987 ARHGEF17Q96PE2 2063 aaPredicted RBP6.22□□□□□ -1.41
CD46-213ENST00000471987 ADM5C9JUS6 153 aa6.21□□□□□ -1.42
CD46-213ENST00000471987 CHRM2P08172 466 aa6.21□□□□□ -1.42
CD46-213ENST00000471987 PPP3CBP16298 524 aa6.21□□□□□ -1.42
CD46-213ENST00000471987 TXNRD1Q16881 649 aa6.21□□□□□ -1.42
CD46-213ENST00000471987 UAP1L1Q3KQV9 507 aa6.21□□□□□ -1.42
CD46-213ENST00000471987 TSTD2Q5T7W7 516 aa6.21□□□□□ -1.42
CD46-213ENST00000471987 ZNF788Q6ZQV5 615 aa6.21□□□□□ -1.42
CD46-213ENST00000471987 PDSS2Q86YH6 399 aa6.21□□□□□ -1.42
CD46-213ENST00000471987 NSUN6Q8TEA1 469 aaKnown RBP6.21□□□□□ -1.42
CD46-213ENST00000471987 MTMR8Q96EF0 704 aa6.21□□□□□ -1.42
CD46-213ENST00000471987 TRIB1Q96RU8 372 aa6.21□□□□□ -1.42
CD46-213ENST00000471987 GNL3LQ9NVN8 582 aaKnown RBP6.21□□□□□ -1.42
CD46-213ENST00000471987 FZD9O00144 591 aa6.2□□□□□ -1.42
CD46-213ENST00000471987 CDK11BP21127 795 aaKnown RBP6.2□□□□□ -1.42
CD46-213ENST00000471987 MALP21145 153 aa6.2□□□□□ -1.42
CD46-213ENST00000471987 CYP2C19P33261 490 aa6.2□□□□□ -1.42
CD46-213ENST00000471987 NPTX2P47972 431 aa6.2□□□□□ -1.42
CD46-213ENST00000471987 ADKP55263 362 aaKnown RBP6.2□□□□□ -1.42
CD46-213ENST00000471987 PCBP2Q15366 365 aaKnown RBP eCLIP6.2□□□□□ -1.42
CD46-213ENST00000471987 CCDC93Q567U6 631 aa6.2□□□□□ -1.42
CD46-213ENST00000471987 EFCAB2Q5VUJ9 269 aa6.2□□□□□ -1.42
CD46-213ENST00000471987 PTF1AQ7RTS3 328 aa6.2□□□□□ -1.42
CD46-213ENST00000471987 PNMA8AQ86V59 439 aaPredicted RBP6.2□□□□□ -1.42
CD46-213ENST00000471987 SCAMP4Q969E2 229 aa6.2□□□□□ -1.42
CD46-213ENST00000471987 LRIG1Q96JA1 1093 aa6.2□□□□□ -1.42
CD46-213ENST00000471987 CCDC8Q9H0W5 538 aaPredicted RBP6.2□□□□□ -1.42
CD46-213ENST00000471987 RLIMQ9NVW2 624 aa6.2□□□□□ -1.42
CD46-213ENST00000471987 SPATA31A3Q5VYP0 1347 aa6.2□□□□□ -1.42
CD46-213ENST00000471987 F2RL2O00254 374 aa6.19□□□□□ -1.42
CD46-213ENST00000471987 POLRMTO00411 1230 aaKnown RBP6.19□□□□□ -1.42
CD46-213ENST00000471987 GABRDO14764 452 aa6.19□□□□□ -1.42
CD46-213ENST00000471987 GNAI3P08754 354 aa6.19□□□□□ -1.42
CD46-213ENST00000471987 ATXN1P54253 815 aaKnown RBP6.19□□□□□ -1.42
CD46-213ENST00000471987 PROK1P58294 105 aa6.19□□□□□ -1.42
CD46-213ENST00000471987 GNAI1P63096 354 aa6.19□□□□□ -1.42
CD46-213ENST00000471987 KHDC1Q4VXA5 237 aaKnown RBP6.19□□□□□ -1.42
CD46-213ENST00000471987 POC1BQ8TC44 478 aa6.19□□□□□ -1.42
CD46-213ENST00000471987 VRK1Q99986 396 aaPredicted RBP6.19□□□□□ -1.42
CD46-213ENST00000471987 BRD9Q9H8M2 597 aa6.19□□□□□ -1.42
CD46-213ENST00000471987 KLC4Q9NSK0 619 aa6.19□□□□□ -1.42
CD46-213ENST00000471987 CFAP97Q9P2B7 532 aa6.19□□□□□ -1.42
CD46-213ENST00000471987 SERPINB13Q9UIV8 391 aa6.19□□□□□ -1.42
CD46-213ENST00000471987 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.19□□□□□ -1.42
CD46-213ENST00000471987 A0A0B4J269 797 aa6.18□□□□□ -1.42
CD46-213ENST00000471987 WDR27A2RRH5 827 aa6.18□□□□□ -1.42
CD46-213ENST00000471987 LINC00473A8K010 186 aa6.18□□□□□ -1.42
CD46-213ENST00000471987 E9PLN8 166 aa6.18□□□□□ -1.42
CD46-213ENST00000471987 GCOM1H8Y6P7 765 aaPredicted RBP6.18□□□□□ -1.42
CD46-213ENST00000471987 SMARCA1P28370 1054 aa6.18□□□□□ -1.42
CD46-213ENST00000471987 SNAPC2Q13487 334 aa6.18□□□□□ -1.42
CD46-213ENST00000471987 TUBB3Q13509 450 aa6.18□□□□□ -1.42
CD46-213ENST00000471987 FAM153CQ494X1 144 aa6.18□□□□□ -1.42
CD46-213ENST00000471987 SLC4A10Q6U841 1118 aa6.18□□□□□ -1.42
CD46-213ENST00000471987 FAM9AQ8IZU1 332 aaPredicted RBP6.18□□□□□ -1.42
CD46-213ENST00000471987 SH2D3CQ8N5H7 860 aa6.18□□□□□ -1.42
CD46-213ENST00000471987 HAPLN3Q96S86 360 aa6.18□□□□□ -1.42
CD46-213ENST00000471987 VKORC1Q9BQB6 163 aa6.18□□□□□ -1.42
CD46-213ENST00000471987 WNT6Q9Y6F9 365 aa6.18□□□□□ -1.42
CD46-213ENST00000471987 ALG1L2C9J202 215 aa6.17□□□□□ -1.42
CD46-213ENST00000471987 NT5C1B-RDH14C9J2C7 533 aa6.17□□□□□ -1.42
CD46-213ENST00000471987 F5H697 171 aa6.17□□□□□ -1.42
CD46-213ENST00000471987 TRIAP1O43715 76 aa6.17□□□□□ -1.42
CD46-213ENST00000471987 KATNA1O75449 491 aa6.17□□□□□ -1.42
CD46-213ENST00000471987 URI1O94763 535 aaPredicted RBP6.17□□□□□ -1.42
CD46-213ENST00000471987 CHEK2O96017 543 aa6.17□□□□□ -1.42
CD46-213ENST00000471987 GJB1P08034 283 aa6.17□□□□□ -1.42
CD46-213ENST00000471987 ELFN1P0C7U0 828 aa6.17□□□□□ -1.42
CD46-213ENST00000471987 CDKN1CP49918 316 aaPredicted RBP6.17□□□□□ -1.42
CD46-213ENST00000471987 HNRNPMP52272 730 aaKnown RBP eCLIP6.17□□□□□ -1.421e-7■■■■■ 27.7
CD46-213ENST00000471987 DSC2Q02487 901 aa6.17□□□□□ -1.42
CD46-213ENST00000471987 SRSF4Q08170 494 aaKnown RBP6.17□□□□□ -1.42
CD46-213ENST00000471987 HASPINQ8TF76 798 aa6.17□□□□□ -1.42
CD46-213ENST00000471987 ANKS1AQ92625 1134 aa6.17□□□□□ -1.42
CD46-213ENST00000471987 PBKQ96KB5 322 aa6.17□□□□□ -1.42
CD46-213ENST00000471987 OSBPL9Q96SU4 736 aa6.17□□□□□ -1.42
CD46-213ENST00000471987 ALG8Q9BVK2 526 aa6.17□□□□□ -1.42
CD46-213ENST00000471987 SLC13A1Q9BZW2 595 aa6.17□□□□□ -1.42
CD46-213ENST00000471987 SIK2Q9H0K1 926 aa6.17□□□□□ -1.42
CD46-213ENST00000471987 POLHQ9Y253 713 aa6.17□□□□□ -1.42
CD46-213ENST00000471987 NR2E3Q9Y5X4 410 aa6.17□□□□□ -1.42
CD46-213ENST00000471987 ZNF785A8K8V0 405 aa6.16□□□□□ -1.42
CD46-213ENST00000471987 SOAT2O75908 522 aa6.16□□□□□ -1.42
CD46-213ENST00000471987 ARIH2O95376 493 aa6.16□□□□□ -1.42
CD46-213ENST00000471987 TTLL1O95922 423 aa6.16□□□□□ -1.42
CD46-213ENST00000471987 FTH1P19P0C7X4 201 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms