RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 TIMM13Q9Y5L4 95 aaPredicted RBP20.56■□□□□ 0.88
PSPC1-203ENST00000471658 LAMA2P24043 3122 aaKnown RBP20.56■□□□□ 0.88
PSPC1-203ENST00000471658 AKR1B15C9JRZ8 316 aaPredicted RBP20.56■□□□□ 0.88
PSPC1-203ENST00000471658 MFAP3LO75121 409 aa20.56■□□□□ 0.88
PSPC1-203ENST00000471658 LINC00271P0C7V0 271 aa20.56■□□□□ 0.88
PSPC1-203ENST00000471658 ZBED6P86452 979 aa20.56■□□□□ 0.88
PSPC1-203ENST00000471658 E4F1Q66K89 784 aaPredicted RBP20.56■□□□□ 0.88
PSPC1-203ENST00000471658 KCNT2Q6UVM3 1135 aa20.56■□□□□ 0.88
PSPC1-203ENST00000471658 UBR7Q8N806 425 aa20.56■□□□□ 0.88
PSPC1-203ENST00000471658 SP7Q8TDD2 431 aaPredicted RBP20.56■□□□□ 0.88
PSPC1-203ENST00000471658 SPAG5Q96R06 1193 aa20.56■□□□□ 0.88
PSPC1-203ENST00000471658 PPP1R9BQ96SB3 815 aa20.56■□□□□ 0.88
PSPC1-203ENST00000471658 CISHQ9NSE2 258 aa20.56■□□□□ 0.88
PSPC1-203ENST00000471658 F8VZ95 297 aa20.55■□□□□ 0.88
PSPC1-203ENST00000471658 TMEM189-UBE2V1I3L0A0 370 aa20.55■□□□□ 0.88
PSPC1-203ENST00000471658 ARHGEF15O94989 841 aa20.55■□□□□ 0.88
PSPC1-203ENST00000471658 CALCAP01258 141 aa20.55■□□□□ 0.88
PSPC1-203ENST00000471658 P4HA1P13674 534 aa20.55■□□□□ 0.88
PSPC1-203ENST00000471658 TBXAS1P24557 533 aaPredicted RBP20.55■□□□□ 0.88
PSPC1-203ENST00000471658 USP8P40818 1118 aa20.55■□□□□ 0.88
PSPC1-203ENST00000471658 ALDH7A1P49419 539 aaKnown RBP20.55■□□□□ 0.88
PSPC1-203ENST00000471658 CCDC173Q0VFZ6 552 aa20.55■□□□□ 0.88
PSPC1-203ENST00000471658 LIMS2Q7Z4I7 341 aa20.55■□□□□ 0.88
PSPC1-203ENST00000471658 COLGALT1Q8NBJ5 622 aa20.55■□□□□ 0.88
PSPC1-203ENST00000471658 SHC3Q92529 594 aa20.55■□□□□ 0.88
PSPC1-203ENST00000471658 GPR62Q9BZJ7 368 aa20.55■□□□□ 0.88
PSPC1-203ENST00000471658 ADAM28Q9UKQ2 775 aa20.55■□□□□ 0.88
PSPC1-203ENST00000471658 NME7Q9Y5B8 376 aa20.55■□□□□ 0.88
PSPC1-203ENST00000471658 HCRTO43612 131 aa20.54■□□□□ 0.88
PSPC1-203ENST00000471658 HUS1O60921 280 aa20.54■□□□□ 0.88
PSPC1-203ENST00000471658 TPM1P09493 284 aa20.54■□□□□ 0.88
PSPC1-203ENST00000471658 RFX1P22670 979 aa20.54■□□□□ 0.88
PSPC1-203ENST00000471658 ORC1Q13415 861 aa20.54■□□□□ 0.88
PSPC1-203ENST00000471658 WSCD1Q658N2 575 aa20.54■□□□□ 0.88
PSPC1-203ENST00000471658 ENOSF1Q7L5Y1 443 aa20.54■□□□□ 0.88
PSPC1-203ENST00000471658 SPRED2Q7Z698 418 aa20.54■□□□□ 0.88
PSPC1-203ENST00000471658 PDCL2Q8N4E4 241 aa20.54■□□□□ 0.88
PSPC1-203ENST00000471658 KBTBD7Q8WVZ9 684 aa20.54■□□□□ 0.88
PSPC1-203ENST00000471658 IQCDQ96DY2 449 aa20.54■□□□□ 0.88
PSPC1-203ENST00000471658 ZNF558Q96NG5 402 aa20.54■□□□□ 0.88
PSPC1-203ENST00000471658 HMGXB4Q9UGU5 601 aa20.54■□□□□ 0.88
PSPC1-203ENST00000471658 PCDHB4Q9Y5E5 795 aa20.54■□□□□ 0.88
PSPC1-203ENST00000471658 GFPT2O94808 682 aa20.53■□□□□ 0.88
PSPC1-203ENST00000471658 STAT1P42224 750 aa20.53■□□□□ 0.88
PSPC1-203ENST00000471658 ARID5AQ03989 594 aa20.53■□□□□ 0.88
PSPC1-203ENST00000471658 ZNF394Q53GI3 561 aa20.53■□□□□ 0.88
PSPC1-203ENST00000471658 TAS1R1Q7RTX1 841 aa20.53■□□□□ 0.88
PSPC1-203ENST00000471658 OSTM1Q86WC4 334 aa20.53■□□□□ 0.88
PSPC1-203ENST00000471658 APPL2Q8NEU8 664 aa20.53■□□□□ 0.88
PSPC1-203ENST00000471658 ZNF397Q8NF99 534 aaPredicted RBP20.53■□□□□ 0.88
PSPC1-203ENST00000471658 FAXDC2Q96IV6 333 aa20.53■□□□□ 0.88
PSPC1-203ENST00000471658 SUSD3Q96L08 255 aa20.53■□□□□ 0.88
PSPC1-203ENST00000471658 CYP3A43Q9HB55 503 aa20.53■□□□□ 0.88
PSPC1-203ENST00000471658 ACP6Q9NPH0 428 aa20.53■□□□□ 0.88
PSPC1-203ENST00000471658 M0QZQ0 153 aa20.53■□□□□ 0.88
PSPC1-203ENST00000471658 KRT5P13647 590 aa20.53■□□□□ 0.88
PSPC1-203ENST00000471658 LAG3P18627 525 aa20.53■□□□□ 0.88
PSPC1-203ENST00000471658 SOX5P35711 763 aa20.53■□□□□ 0.88
PSPC1-203ENST00000471658 PBX2P40425 430 aa20.53■□□□□ 0.88
PSPC1-203ENST00000471658 TMEM270Q6UE05 265 aa20.53■□□□□ 0.88
PSPC1-203ENST00000471658 SLC39A11Q8N1S5 342 aa20.53■□□□□ 0.88
PSPC1-203ENST00000471658 TOP6BLQ8N6T0 577 aa20.53■□□□□ 0.88
PSPC1-203ENST00000471658 OR8K1Q8NGG5 319 aa20.53■□□□□ 0.88
PSPC1-203ENST00000471658 WHAMMQ8TF30 809 aa20.53■□□□□ 0.88
PSPC1-203ENST00000471658 IGSF21Q96ID5 467 aa20.53■□□□□ 0.88
PSPC1-203ENST00000471658 B3GALT6Q96L58 329 aa20.53■□□□□ 0.88
PSPC1-203ENST00000471658 FAM81BQ96LP2 452 aa20.53■□□□□ 0.88
PSPC1-203ENST00000471658 TWNKQ96RR1 684 aa20.53■□□□□ 0.88
PSPC1-203ENST00000471658 ABHD10Q9NUJ1 306 aa20.53■□□□□ 0.88
PSPC1-203ENST00000471658 DAAM1Q9Y4D1 1078 aa20.53■□□□□ 0.88
PSPC1-203ENST00000471658 RANBP2P49792 3224 aaKnown RBP20.52■□□□□ 0.88
PSPC1-203ENST00000471658 CYP26A1O43174 497 aa20.52■□□□□ 0.88
PSPC1-203ENST00000471658 BMP8BP34820 402 aa20.52■□□□□ 0.88
PSPC1-203ENST00000471658 CLCN1P35523 988 aa20.52■□□□□ 0.88
PSPC1-203ENST00000471658 SFMBT2Q5VUG0 894 aa20.52■□□□□ 0.88
PSPC1-203ENST00000471658 FUT10Q6P4F1 479 aa20.52■□□□□ 0.88
PSPC1-203ENST00000471658 CNGA4Q8IV77 575 aa20.52■□□□□ 0.88
PSPC1-203ENST00000471658 FAM71AQ8IYT1 594 aa20.52■□□□□ 0.88
PSPC1-203ENST00000471658 ADGRF2Q8IZF7 708 aa20.52■□□□□ 0.88
PSPC1-203ENST00000471658 DNAJC7Q99615 494 aa20.52■□□□□ 0.88
PSPC1-203ENST00000471658 VN1R3Q9BXE9 311 aa20.52■□□□□ 0.88
PSPC1-203ENST00000471658 ELOVL4Q9GZR5 314 aa20.52■□□□□ 0.88
PSPC1-203ENST00000471658 PCDHB8Q9UN66 801 aa20.52■□□□□ 0.88
PSPC1-203ENST00000471658 YBX2Q9Y2T7 364 aaKnown RBP20.52■□□□□ 0.88
PSPC1-203ENST00000471658 LINC01553A4QN01 128 aa20.51■□□□□ 0.87
PSPC1-203ENST00000471658 CILPO75339 1184 aa20.51■□□□□ 0.87
PSPC1-203ENST00000471658 TACC1O75410 805 aa20.51■□□□□ 0.87
PSPC1-203ENST00000471658 PDGFRBP09619 1106 aa20.51■□□□□ 0.87
PSPC1-203ENST00000471658 SKILP12757 684 aa20.51■□□□□ 0.87
PSPC1-203ENST00000471658 LMO2P25791 158 aa20.51■□□□□ 0.87
PSPC1-203ENST00000471658 TKTP29401 623 aaKnown RBP20.51■□□□□ 0.87
PSPC1-203ENST00000471658 NDST1P52848 882 aa20.51■□□□□ 0.87
PSPC1-203ENST00000471658 FAM171A1Q5VUB5 890 aa20.51■□□□□ 0.87
PSPC1-203ENST00000471658 WDR59Q6PJI9 974 aa20.51■□□□□ 0.87
PSPC1-203ENST00000471658 DPH6Q7L8W6 267 aa20.51■□□□□ 0.87
PSPC1-203ENST00000471658 IRF2BP2Q7Z5L9 587 aa20.51■□□□□ 0.87
PSPC1-203ENST00000471658 RBBP8NLQ8NC74 664 aaPredicted RBP20.51■□□□□ 0.87
PSPC1-203ENST00000471658 OR6B3Q8NGW1 331 aa20.51■□□□□ 0.87
PSPC1-203ENST00000471658 CLP1Q92989 425 aaKnown RBP20.51■□□□□ 0.87
PSPC1-203ENST00000471658 JAKMIP2Q96AA8 810 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms