RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 HSPBAP1Q96EW2 488 aa6.5□□□□□ -1.37
PRPF40A-206ENST00000471167 MRPL46Q9H2W6 279 aaKnown RBP6.5□□□□□ -1.37
PRPF40A-206ENST00000471167 GPR35Q9HC97 309 aa6.5□□□□□ -1.37
PRPF40A-206ENST00000471167 TRGV11A0A075B6L2 103 aa6.49□□□□□ -1.37
PRPF40A-206ENST00000471167 CCDC195A0A1B0GUA6 201 aa6.49□□□□□ -1.37
PRPF40A-206ENST00000471167 ANXA11P50995 505 aaKnown RBP6.49□□□□□ -1.37
PRPF40A-206ENST00000471167 PSMC1P62191 440 aaKnown RBP6.49□□□□□ -1.37
PRPF40A-206ENST00000471167 TCF15Q12870 199 aa6.49□□□□□ -1.37
PRPF40A-206ENST00000471167 HABP2Q14520 560 aaPredicted RBP6.49□□□□□ -1.37
PRPF40A-206ENST00000471167 TAPT1Q6NXT6 567 aa6.49□□□□□ -1.37
PRPF40A-206ENST00000471167 FBXO42Q6P3S6 717 aa6.49□□□□□ -1.37
PRPF40A-206ENST00000471167 HEATR3Q7Z4Q2 680 aa6.49□□□□□ -1.37
PRPF40A-206ENST00000471167 CLNKQ7Z7G1 428 aa6.49□□□□□ -1.37
PRPF40A-206ENST00000471167 PDSS2Q86YH6 399 aa6.49□□□□□ -1.37
PRPF40A-206ENST00000471167 COLGALT2Q8IYK4 626 aa6.49□□□□□ -1.37
PRPF40A-206ENST00000471167 SCAMP4Q969E2 229 aa6.49□□□□□ -1.37
PRPF40A-206ENST00000471167 LRFN3Q9BTN0 628 aa6.49□□□□□ -1.37
PRPF40A-206ENST00000471167 INTS13Q9NVM9 706 aa6.49□□□□□ -1.37
PRPF40A-206ENST00000471167 COX11Q9Y6N1 276 aa6.49□□□□□ -1.37
PRPF40A-206ENST00000471167 WDR27A2RRH5 827 aa6.48□□□□□ -1.37
PRPF40A-206ENST00000471167 FBLP22087 321 aaKnown RBP6.48□□□□□ -1.37
PRPF40A-206ENST00000471167 CYP2C19P33261 490 aa6.48□□□□□ -1.37
PRPF40A-206ENST00000471167 FOLR3P41439 243 aa6.48□□□□□ -1.37
PRPF40A-206ENST00000471167 RPS7P62081 194 aaKnown RBP6.48□□□□□ -1.37
PRPF40A-206ENST00000471167 NKX6-1P78426 367 aaPredicted RBP6.48□□□□□ -1.37
PRPF40A-206ENST00000471167 FPGSQ05932 587 aa6.48□□□□□ -1.37
PRPF40A-206ENST00000471167 MCL1Q07820 350 aa6.48□□□□□ -1.37
PRPF40A-206ENST00000471167 ZNF844Q08AG5 666 aa6.48□□□□□ -1.37
PRPF40A-206ENST00000471167 KIF22Q14807 665 aa6.48□□□□□ -1.37
PRPF40A-206ENST00000471167 COLEC12Q5KU26 742 aa6.48□□□□□ -1.37
PRPF40A-206ENST00000471167 ZBTB46Q86UZ6 589 aa6.48□□□□□ -1.37
PRPF40A-206ENST00000471167 PLBD2Q8NHP8 589 aa6.48□□□□□ -1.37
PRPF40A-206ENST00000471167 ZNF764Q96H86 408 aaPredicted RBP6.48□□□□□ -1.37
PRPF40A-206ENST00000471167 RTFDC1Q9BY42 306 aaPredicted RBP6.48□□□□□ -1.37
PRPF40A-206ENST00000471167 RHOBTB2Q9BYZ6 727 aa6.48□□□□□ -1.37
PRPF40A-206ENST00000471167 SLC12A5Q9H2X9 1139 aa6.48□□□□□ -1.37
PRPF40A-206ENST00000471167 DDX56Q9NY93 547 aaKnown RBP6.48□□□□□ -1.37
PRPF40A-206ENST00000471167 ABCF2Q9UG63 623 aa6.48□□□□□ -1.37
PRPF40A-206ENST00000471167 IP6K2Q9UHH9 426 aa6.48□□□□□ -1.37
PRPF40A-206ENST00000471167 ZNF785A8K8V0 405 aa6.47□□□□□ -1.37
PRPF40A-206ENST00000471167 YY2O15391 372 aa6.47□□□□□ -1.37
PRPF40A-206ENST00000471167 AHSGP02765 367 aa6.47□□□□□ -1.37
PRPF40A-206ENST00000471167 ANXA1P04083 346 aa6.47□□□□□ -1.37
PRPF40A-206ENST00000471167 ALDH2P05091 517 aa6.47□□□□□ -1.37
PRPF40A-206ENST00000471167 TYRP14679 529 aa6.47□□□□□ -1.37
PRPF40A-206ENST00000471167 PPP3CBP16298 524 aa6.47□□□□□ -1.37
PRPF40A-206ENST00000471167 PPP1R32Q7Z5V6 425 aa6.47□□□□□ -1.37
PRPF40A-206ENST00000471167 CELF5Q8N6W0 485 aaKnown RBP6.47□□□□□ -1.37
PRPF40A-206ENST00000471167 MYCBPAPQ8TBZ2 947 aa6.47□□□□□ -1.37
PRPF40A-206ENST00000471167 RGMAQ96B86 450 aa6.47□□□□□ -1.37
PRPF40A-206ENST00000471167 TRIB1Q96RU8 372 aa6.47□□□□□ -1.37
PRPF40A-206ENST00000471167 POLR3GLQ9BT43 218 aa6.47□□□□□ -1.37
PRPF40A-206ENST00000471167 BRD9Q9H8M2 597 aa6.47□□□□□ -1.37
PRPF40A-206ENST00000471167 RLIMQ9NVW2 624 aa6.47□□□□□ -1.37
PRPF40A-206ENST00000471167 POLHQ9Y253 713 aa6.47□□□□□ -1.37
PRPF40A-206ENST00000471167 LRRC3CA6NJW4 275 aa6.46□□□□□ -1.38
PRPF40A-206ENST00000471167 ADM5C9JUS6 153 aa6.46□□□□□ -1.38
PRPF40A-206ENST00000471167 ALDH1L1O75891 902 aa6.46□□□□□ -1.38
PRPF40A-206ENST00000471167 KIF20AO95235 890 aa6.46□□□□□ -1.38
PRPF40A-206ENST00000471167 IL33O95760 270 aa6.46□□□□□ -1.38
PRPF40A-206ENST00000471167 PIK3CGP48736 1102 aa6.46□□□□□ -1.38
PRPF40A-206ENST00000471167 ZNF135P52742 658 aaPredicted RBP6.46□□□□□ -1.38
PRPF40A-206ENST00000471167 MAPK10P53779 464 aa6.46□□□□□ -1.38
PRPF40A-206ENST00000471167 MRPS35P82673 323 aaKnown RBP6.46□□□□□ -1.38
PRPF40A-206ENST00000471167 ZNF267Q14586 743 aaPredicted RBP6.46□□□□□ -1.38
PRPF40A-206ENST00000471167 ATAT1Q5SQI0 421 aa6.46□□□□□ -1.38
PRPF40A-206ENST00000471167 DPY19L2P1Q6NXN4 242 aa6.46□□□□□ -1.38
PRPF40A-206ENST00000471167 TAF2Q6P1X5 1199 aa6.46□□□□□ -1.38
PRPF40A-206ENST00000471167 SLC30A10Q6XR72 485 aa6.46□□□□□ -1.38
PRPF40A-206ENST00000471167 RAVER1Q8IY67 606 aaKnown RBP6.46□□□□□ -1.38
PRPF40A-206ENST00000471167 ACTRT2Q8TDY3 377 aa6.46□□□□□ -1.38
PRPF40A-206ENST00000471167 TFAP2BQ92481 460 aa6.46□□□□□ -1.38
PRPF40A-206ENST00000471167 SLC9A6Q92581 669 aa6.46□□□□□ -1.38
PRPF40A-206ENST00000471167 HPS3Q969F9 1004 aa6.46□□□□□ -1.38
PRPF40A-206ENST00000471167 MVB12AQ96EY5 273 aa6.46□□□□□ -1.38
PRPF40A-206ENST00000471167 SLAMF7Q9NQ25 335 aa6.46□□□□□ -1.38
PRPF40A-206ENST00000471167 IL17RBQ9NRM6 502 aa6.46□□□□□ -1.38
PRPF40A-206ENST00000471167 SEMA4GQ9NTN9 838 aa6.46□□□□□ -1.38
PRPF40A-206ENST00000471167 INSL6Q9Y581 213 aa6.46□□□□□ -1.38
PRPF40A-206ENST00000471167 KAT6AQ92794 2004 aa6.45□□□□□ -1.38
PRPF40A-206ENST00000471167 E7ENX8 843 aa6.45□□□□□ -1.38
PRPF40A-206ENST00000471167 FTLP02792 175 aaPredicted RBP6.45□□□□□ -1.38
PRPF40A-206ENST00000471167 RPLP2P05387 115 aaKnown RBP6.45□□□□□ -1.38
PRPF40A-206ENST00000471167 PDGFRBP09619 1106 aa6.45□□□□□ -1.38
PRPF40A-206ENST00000471167 FTH1P19P0C7X4 201 aa6.45□□□□□ -1.38
PRPF40A-206ENST00000471167 PF4V1P10720 104 aa6.45□□□□□ -1.38
PRPF40A-206ENST00000471167 AKAP5P24588 427 aa6.45□□□□□ -1.38
PRPF40A-206ENST00000471167 TAP2Q03519 686 aa6.45□□□□□ -1.38
PRPF40A-206ENST00000471167 PLS1Q14651 629 aa6.45□□□□□ -1.38
PRPF40A-206ENST00000471167 HLXQ14774 488 aaPredicted RBP6.45□□□□□ -1.38
PRPF40A-206ENST00000471167 TTF1Q15361 905 aaPredicted RBP6.45□□□□□ -1.38
PRPF40A-206ENST00000471167 PGS1Q32NB8 556 aa6.45□□□□□ -1.38
PRPF40A-206ENST00000471167 MICALCLQ6ZW33 695 aa6.45□□□□□ -1.38
PRPF40A-206ENST00000471167 FAM9AQ8IZU1 332 aaPredicted RBP6.45□□□□□ -1.38
PRPF40A-206ENST00000471167 SH2D3CQ8N5H7 860 aa6.45□□□□□ -1.38
PRPF40A-206ENST00000471167 KLK15Q9H2R5 256 aa6.45□□□□□ -1.38
PRPF40A-206ENST00000471167 MAN1C1Q9NR34 630 aa6.45□□□□□ -1.38
PRPF40A-206ENST00000471167 AASDHPPTQ9NRN7 309 aa6.45□□□□□ -1.38
PRPF40A-206ENST00000471167 TLK1Q9UKI8 766 aa6.45□□□□□ -1.38
PRPF40A-206ENST00000471167 PCDHA1Q9Y5I3 950 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms