RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 JAM2P57087 298 aa6.39□□□□□ -1.39
USP39-213ENST00000467885 ZBED6P86452 979 aa6.39□□□□□ -1.39
USP39-213ENST00000467885 MYL7Q01449 175 aa6.39□□□□□ -1.39
USP39-213ENST00000467885 GCNT1Q02742 428 aa6.39□□□□□ -1.39
USP39-213ENST00000467885 GRIK3Q13003 919 aa6.39□□□□□ -1.39
USP39-213ENST00000467885 TUSC3Q13454 348 aa6.39□□□□□ -1.39
USP39-213ENST00000467885 TRPC3Q13507 836 aa6.39□□□□□ -1.39
USP39-213ENST00000467885 SOWAHAQ2M3V2 549 aa6.39□□□□□ -1.39
USP39-213ENST00000467885 WDR72Q3MJ13 1102 aa6.39□□□□□ -1.39
USP39-213ENST00000467885 TIGD5Q53EQ6 642 aa6.39□□□□□ -1.39
USP39-213ENST00000467885 WDR44Q5JSH3 913 aa6.39□□□□□ -1.39
USP39-213ENST00000467885 C9orf50Q5SZB4 431 aa6.39□□□□□ -1.39
USP39-213ENST00000467885 SMYD5Q6GMV2 418 aa6.39□□□□□ -1.39
USP39-213ENST00000467885 DPH6Q7L8W6 267 aa6.39□□□□□ -1.39
USP39-213ENST00000467885 TAS1R1Q7RTX1 841 aa6.39□□□□□ -1.39
USP39-213ENST00000467885 DRC7Q8IY82 874 aa6.39□□□□□ -1.39
USP39-213ENST00000467885 FAM71AQ8IYT1 594 aa6.39□□□□□ -1.39
USP39-213ENST00000467885 LRRC52Q8N7C0 313 aa6.39□□□□□ -1.39
USP39-213ENST00000467885 C3orf58Q8NDZ4 430 aa6.39□□□□□ -1.39
USP39-213ENST00000467885 NEK11Q8NG66 645 aa6.39□□□□□ -1.39
USP39-213ENST00000467885 OR8K1Q8NGG5 319 aa6.39□□□□□ -1.39
USP39-213ENST00000467885 WHAMMQ8TF30 809 aa6.39□□□□□ -1.39
USP39-213ENST00000467885 SYN2Q92777 582 aaPredicted RBP6.39□□□□□ -1.39
USP39-213ENST00000467885 DNAJC7Q99615 494 aa6.39□□□□□ -1.39
USP39-213ENST00000467885 CHP1Q99653 195 aa6.39□□□□□ -1.39
USP39-213ENST00000467885 LBHD1Q9BQE6 289 aaPredicted RBP6.39□□□□□ -1.39
USP39-213ENST00000467885 LSM14BQ9BX40 385 aaKnown RBP6.39□□□□□ -1.39
USP39-213ENST00000467885 BCO2Q9BYV7 579 aa6.39□□□□□ -1.39
USP39-213ENST00000467885 RC3H2Q9HBD1 1191 aaKnown RBP6.39□□□□□ -1.39
USP39-213ENST00000467885 NLRC4Q9NPP4 1024 aa6.39□□□□□ -1.39
USP39-213ENST00000467885 GCNT4Q9P109 453 aa6.39□□□□□ -1.39
USP39-213ENST00000467885 CEP72Q9P209 647 aa6.39□□□□□ -1.39
USP39-213ENST00000467885 POLIQ9UNA4 740 aa6.39□□□□□ -1.39
USP39-213ENST00000467885 INPP5FQ9Y2H2 1132 aa6.39□□□□□ -1.39
USP39-213ENST00000467885 LUC7L2Q9Y383 392 aaKnown RBP6.39□□□□□ -1.39
USP39-213ENST00000467885 NME7Q9Y5B8 376 aa6.39□□□□□ -1.39
USP39-213ENST00000467885 FHOD1Q9Y613 1164 aa6.39□□□□□ -1.39
USP39-213ENST00000467885 TBKBP1A7MCY6 615 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 GRXCR1A8MXD5 290 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 AKR1B15C9JRZ8 316 aaPredicted RBP6.38□□□□□ -1.39
USP39-213ENST00000467885 M0QZQ0 153 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 PODXLO00592 558 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 GABRDO14764 452 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 HOXA2O43364 376 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 TACC1O75410 805 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 B3GAT3O94766 335 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 ITGB1P05556 798 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 FECHP22830 423 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 PAX3P23760 479 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 LMO2P25791 158 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 BMP8BP34820 402 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 ASPAP45381 313 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 SLC11A1P49279 550 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 MFAP3P55082 362 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 BCAR1P56945 870 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 CUL2Q13617 745 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 MRPL58Q14197 206 aaKnown RBP6.38□□□□□ -1.39
USP39-213ENST00000467885 ARHGAP44Q17R89 818 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 ZNF667Q5HYK9 610 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 E4F1Q66K89 784 aaPredicted RBP6.38□□□□□ -1.39
USP39-213ENST00000467885 HGSNATQ68CP4 663 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 ZNF787Q6DD87 383 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 FAM117BQ6P1L5 589 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 PPFIBP1Q86W92 1011 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 HERC6Q8IVU3 1022 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 LRRC8AQ8IWT6 810 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 CRYBG2Q8N1P7 616 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 PPM1KQ8N3J5 372 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 URGCPQ8TCY9 931 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 RSPH1Q8WYR4 309 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 SHC3Q92529 594 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 IQCDQ96DY2 449 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 SENP8Q96LD8 212 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 PCMTD1Q96MG8 357 aaPredicted RBP6.38□□□□□ -1.39
USP39-213ENST00000467885 UROC1Q96N76 676 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 ZNF830Q96NB3 372 aaPredicted RBP6.38□□□□□ -1.39
USP39-213ENST00000467885 NT5C1BQ96P26 610 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 PANX2Q96RD6 677 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 RAD9AQ99638 391 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 ARID3AQ99856 593 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 MRPL45Q9BRJ2 306 aaKnown RBP6.38□□□□□ -1.39
USP39-213ENST00000467885 TMEM175Q9BSA9 504 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 SYT11Q9BT88 431 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 COLEC11Q9BWP8 271 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 GPR62Q9BZJ7 368 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 CYP3A43Q9HB55 503 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 NXF1Q9UBU9 619 aaKnown RBP6.38□□□□□ -1.39
USP39-213ENST00000467885 MYO6Q9UM54 1294 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 FAN1Q9Y2M0 1017 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 DAAM1Q9Y4D1 1078 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.38□□□□□ -1.39
USP39-213ENST00000467885 SNX9Q9Y5X1 595 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 SLC4A7Q9Y6M7 1214 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 TET1Q8NFU7 2136 aa6.38□□□□□ -1.39
USP39-213ENST00000467885 CASTOR2A6NHX0 329 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 LRRC53A6NM62 1247 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 NT5C1B-RDH14C9J2C7 533 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 TMEM189-UBE2V1I3L0A0 370 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 I3L4J1 428 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 CYB561D2O14569 222 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms