RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 TET1Q8NFU7 2136 aa5.02□□□□□ -1.61
SSR3-204ENST00000467733 ELP1O95163 1332 aa5.01□□□□□ -1.61
SSR3-204ENST00000467733 FLT1P17948 1338 aa5.01□□□□□ -1.61
SSR3-204ENST00000467733 ZNF292O60281 2723 aa5.01□□□□□ -1.61
SSR3-204ENST00000467733 A0A0U1RQG5 324 aaPredicted RBP5.01□□□□□ -1.61
SSR3-204ENST00000467733 PRODHO43272 600 aa5.01□□□□□ -1.61
SSR3-204ENST00000467733 KNG1P01042 644 aa5.01□□□□□ -1.61
SSR3-204ENST00000467733 GH2P01242 217 aa5.01□□□□□ -1.61
SSR3-204ENST00000467733 FGFR1P11362 822 aa5.01□□□□□ -1.61
SSR3-204ENST00000467733 AKR1A1P14550 325 aa5.01□□□□□ -1.61
SSR3-204ENST00000467733 CST5P28325 142 aaPredicted RBP5.01□□□□□ -1.61
SSR3-204ENST00000467733 CSF2RBP32927 897 aa5.01□□□□□ -1.61
SSR3-204ENST00000467733 RABGGTBP53611 331 aa5.01□□□□□ -1.61
SSR3-204ENST00000467733 PTH1RQ03431 593 aa5.01□□□□□ -1.61
SSR3-204ENST00000467733 EXOSC9Q06265 439 aaKnown RBP5.01□□□□□ -1.61
SSR3-204ENST00000467733 DPTQ07507 201 aa5.01□□□□□ -1.61
SSR3-204ENST00000467733 SSRP1Q08945 709 aaKnown RBP5.01□□□□□ -1.61
SSR3-204ENST00000467733 PRSS53Q2L4Q9 553 aa5.01□□□□□ -1.61
SSR3-204ENST00000467733 USP39Q53GS9 565 aaKnown RBP5.01□□□□□ -1.61
SSR3-204ENST00000467733 NSMFQ6X4W1 530 aa5.01□□□□□ -1.61
SSR3-204ENST00000467733 FOXP4Q8IVH2 680 aaPredicted RBP5.01□□□□□ -1.61
SSR3-204ENST00000467733 MB21D1Q8N884 522 aa5.01□□□□□ -1.61
SSR3-204ENST00000467733 UBXN4Q92575 508 aa5.01□□□□□ -1.61
SSR3-204ENST00000467733 MKL1Q969V6 931 aa5.01□□□□□ -1.61
SSR3-204ENST00000467733 NSUN4Q96CB9 384 aaKnown RBP5.01□□□□□ -1.61
SSR3-204ENST00000467733 UIMC1Q96RL1 719 aa5.01□□□□□ -1.61
SSR3-204ENST00000467733 SRPK1Q96SB4 655 aaKnown RBP5.01□□□□□ -1.61
SSR3-204ENST00000467733 DNAJC2Q99543 621 aaKnown RBP5.01□□□□□ -1.61
SSR3-204ENST00000467733 CDC6Q99741 560 aa5.01□□□□□ -1.61
SSR3-204ENST00000467733 SIL1Q9H173 461 aa5.01□□□□□ -1.61
SSR3-204ENST00000467733 MROH8Q9H579 483 aa5.01□□□□□ -1.61
SSR3-204ENST00000467733 RPAP3Q9H6T3 665 aaPredicted RBP5.01□□□□□ -1.61
SSR3-204ENST00000467733 MYO15AQ9UKN7 3530 aa5.01□□□□□ -1.61
SSR3-204ENST00000467733 KMT2BQ9UMN6 2715 aaPredicted RBP5.01□□□□□ -1.61
SSR3-204ENST00000467733 EPOPA6NHQ4 379 aa5□□□□□ -1.61
SSR3-204ENST00000467733 FGBP02675 491 aa5□□□□□ -1.61
SSR3-204ENST00000467733 HLA-DOAP06340 250 aa5□□□□□ -1.61
SSR3-204ENST00000467733 ALADP13716 330 aa5□□□□□ -1.61
SSR3-204ENST00000467733 MYOGP15173 224 aa5□□□□□ -1.61
SSR3-204ENST00000467733 ATP2A2P16615 1042 aaKnown RBP5□□□□□ -1.61
SSR3-204ENST00000467733 CYP2C18P33260 490 aa5□□□□□ -1.61
SSR3-204ENST00000467733 CDK7P50613 346 aa5□□□□□ -1.61
SSR3-204ENST00000467733 SERINC3Q13530 473 aa5□□□□□ -1.61
SSR3-204ENST00000467733 MVPQ14764 893 aaKnown RBP5□□□□□ -1.61
SSR3-204ENST00000467733 SF1Q15637 639 aaKnown RBP5□□□□□ -1.61
SSR3-204ENST00000467733 KRT40Q6A162 431 aa5□□□□□ -1.61
SSR3-204ENST00000467733 CCSAPQ6IQ19 270 aaPredicted RBP5□□□□□ -1.61
SSR3-204ENST00000467733 ATF7IPQ6VMQ6 1270 aa5□□□□□ -1.61
SSR3-204ENST00000467733 OTOP2Q7RTS6 562 aa5□□□□□ -1.61
SSR3-204ENST00000467733 ZNF575Q86XF7 245 aa5□□□□□ -1.61
SSR3-204ENST00000467733 PROSER1Q86XN7 944 aa5□□□□□ -1.61
SSR3-204ENST00000467733 MAPKAPK5Q8IW41 473 aa5□□□□□ -1.61
SSR3-204ENST00000467733 KREMEN2Q8NCW0 462 aa5□□□□□ -1.61
SSR3-204ENST00000467733 KLHDC9Q8NEP7 349 aa5□□□□□ -1.61
SSR3-204ENST00000467733 GLT1D1Q96MS3 346 aa5□□□□□ -1.61
SSR3-204ENST00000467733 CEP89Q96ST8 783 aa5□□□□□ -1.61
SSR3-204ENST00000467733 NOL10Q9BSC4 688 aaKnown RBP5□□□□□ -1.61
SSR3-204ENST00000467733 OSBPL2Q9H1P3 480 aa5□□□□□ -1.61
SSR3-204ENST00000467733 HIPK3Q9H422 1215 aa5□□□□□ -1.61
SSR3-204ENST00000467733 ARHGEF4Q9NR80 690 aa5□□□□□ -1.61
SSR3-204ENST00000467733 PFDN2Q9UHV9 154 aa5□□□□□ -1.61
SSR3-204ENST00000467733 NCOR2Q9Y618 2525 aa5□□□□□ -1.61
SSR3-204ENST00000467733 PLXNA3P51805 1871 aa5□□□□□ -1.61
SSR3-204ENST00000467733 ACACBO00763 2458 aa5□□□□□ -1.61
SSR3-204ENST00000467733 MYO7AQ13402 2215 aa5□□□□□ -1.61
SSR3-204ENST00000467733 FRYLO94915 3013 aa4.99□□□□□ -1.61
SSR3-204ENST00000467733 ATG2AQ2TAZ0 1938 aa4.99□□□□□ -1.61
SSR3-204ENST00000467733 TRIP12Q14669 1992 aaPredicted RBP4.99□□□□□ -1.61
SSR3-204ENST00000467733 MYADML2A6NDP7 307 aa4.99□□□□□ -1.61
SSR3-204ENST00000467733 ARVCFO00192 962 aa4.99□□□□□ -1.61
SSR3-204ENST00000467733 ARNTLO00327 626 aa4.99□□□□□ -1.61
SSR3-204ENST00000467733 DCXO43602 365 aa4.99□□□□□ -1.61
SSR3-204ENST00000467733 DLX3O60479 287 aa4.99□□□□□ -1.61
SSR3-204ENST00000467733 DUSP11O75319 330 aaKnown RBP4.99□□□□□ -1.61
SSR3-204ENST00000467733 BAG3O95817 575 aa4.99□□□□□ -1.61
SSR3-204ENST00000467733 CD4P01730 458 aa4.99□□□□□ -1.61
SSR3-204ENST00000467733 APPP05067 770 aa4.99□□□□□ -1.61
SSR3-204ENST00000467733 CA3P07451 260 aa4.99□□□□□ -1.61
SSR3-204ENST00000467733 PABPC1P11940 636 aaKnown RBP4.99□□□□□ -1.61
SSR3-204ENST00000467733 FCER1AP12319 257 aa4.99□□□□□ -1.61
SSR3-204ENST00000467733 IL15P40933 162 aaPredicted RBP4.99□□□□□ -1.61
SSR3-204ENST00000467733 GRIA2P42262 883 aa4.99□□□□□ -1.61
SSR3-204ENST00000467733 INHBCP55103 352 aa4.99□□□□□ -1.61
SSR3-204ENST00000467733 USP10Q14694 798 aaKnown RBP4.99□□□□□ -1.61
SSR3-204ENST00000467733 COG2Q14746 738 aa4.99□□□□□ -1.61
SSR3-204ENST00000467733 ZC3H12BQ5HYM0 836 aaKnown RBP4.99□□□□□ -1.61
SSR3-204ENST00000467733 SLC35F1Q5T1Q4 408 aa4.99□□□□□ -1.61
SSR3-204ENST00000467733 RSPO2Q6UXX9 243 aaPredicted RBP4.99□□□□□ -1.61
SSR3-204ENST00000467733 USP53Q70EK8 1073 aa4.99□□□□□ -1.61
SSR3-204ENST00000467733 SPATC1Q76KD6 591 aa4.99□□□□□ -1.61
SSR3-204ENST00000467733 GPR155Q7Z3F1 870 aa4.99□□□□□ -1.61
SSR3-204ENST00000467733 TAX1BP1Q86VP1 789 aa4.99□□□□□ -1.61
SSR3-204ENST00000467733 PCSK9Q8NBP7 692 aaKnown RBP4.99□□□□□ -1.61
SSR3-204ENST00000467733 ACER1Q8TDN7 264 aa4.99□□□□□ -1.61
SSR3-204ENST00000467733 TGFBRAP1Q8WUH2 860 aa4.99□□□□□ -1.61
SSR3-204ENST00000467733 DCAF4Q8WV16 495 aa4.99□□□□□ -1.61
SSR3-204ENST00000467733 NEIL1Q96FI4 390 aaPredicted RBP4.99□□□□□ -1.61
SSR3-204ENST00000467733 TRIM8Q9BZR9 551 aa4.99□□□□□ -1.61
SSR3-204ENST00000467733 KATNBL1Q9H079 304 aa4.99□□□□□ -1.61
SSR3-204ENST00000467733 USP44Q9H0E7 712 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms