RNA–Protein interactions for RNA: ENST00000466854.5

CCDC58-203, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-203ENST00000466854 ALDH1L1O75891 902 aa4.57□□□□□ -1.68
CCDC58-203ENST00000466854 PDGFRBP09619 1106 aa4.57□□□□□ -1.68
CCDC58-203ENST00000466854 EDNRBP24530 442 aa4.57□□□□□ -1.68
CCDC58-203ENST00000466854 SMARCA1P28370 1054 aa4.57□□□□□ -1.68
CCDC58-203ENST00000466854 ZNF280AP59817 542 aaPredicted RBP4.57□□□□□ -1.68
CCDC58-203ENST00000466854 CTXN1P60606 82 aa4.57□□□□□ -1.68
CCDC58-203ENST00000466854 KRT85P78386 507 aa4.57□□□□□ -1.68
CCDC58-203ENST00000466854 SETQ01105 290 aaPredicted RBP4.57□□□□□ -1.68
CCDC58-203ENST00000466854 TARDBPQ13148 414 aaKnown RBP eCLIP4.57□□□□□ -1.68
CCDC58-203ENST00000466854 CCDC157Q569K6 752 aa4.57□□□□□ -1.68
CCDC58-203ENST00000466854 PAPD7Q5XG87 772 aaKnown RBP4.57□□□□□ -1.68
CCDC58-203ENST00000466854 FOXR2Q6PJQ5 311 aa4.57□□□□□ -1.68
CCDC58-203ENST00000466854 FITM2Q8N6M3 262 aa4.57□□□□□ -1.68
CCDC58-203ENST00000466854 ZNF384Q8TF68 577 aa4.57□□□□□ -1.68
CCDC58-203ENST00000466854 NUP133Q8WUM0 1156 aa4.57□□□□□ -1.68
CCDC58-203ENST00000466854 HOOK2Q96ED9 719 aa4.57□□□□□ -1.68
CCDC58-203ENST00000466854 HSPBAP1Q96EW2 488 aa4.57□□□□□ -1.68
CCDC58-203ENST00000466854 VRK1Q99986 396 aaPredicted RBP4.57□□□□□ -1.68
CCDC58-203ENST00000466854 LAMC3Q9Y6N6 1575 aa4.57□□□□□ -1.68
CCDC58-203ENST00000466854 COL3A1P02461 1466 aaPredicted RBP4.56□□□□□ -1.68
CCDC58-203ENST00000466854 GRM6O15303 877 aa4.56□□□□□ -1.68
CCDC58-203ENST00000466854 PF4V1P10720 104 aa4.56□□□□□ -1.68
CCDC58-203ENST00000466854 MTHFD1P11586 935 aaKnown RBP4.56□□□□□ -1.68
CCDC58-203ENST00000466854 CDK4P11802 303 aa4.56□□□□□ -1.68
CCDC58-203ENST00000466854 FCER1AP12319 257 aa4.56□□□□□ -1.68
CCDC58-203ENST00000466854 PDCP20941 246 aa4.56□□□□□ -1.68
CCDC58-203ENST00000466854 SLC6A4P31645 630 aa4.56□□□□□ -1.68
CCDC58-203ENST00000466854 PROK1P58294 105 aa4.56□□□□□ -1.68
CCDC58-203ENST00000466854 KHDC1Q4VXA5 237 aaKnown RBP4.56□□□□□ -1.68
CCDC58-203ENST00000466854 HSP90AB4PQ58FF6 505 aa4.56□□□□□ -1.68
CCDC58-203ENST00000466854 DACT2Q5SW24 774 aa4.56□□□□□ -1.68
CCDC58-203ENST00000466854 TTC7BQ86TV6 843 aa4.56□□□□□ -1.68
CCDC58-203ENST00000466854 SRRM1Q8IYB3 904 aaKnown RBP4.56□□□□□ -1.68
CCDC58-203ENST00000466854 CPA6Q8N4T0 437 aa4.56□□□□□ -1.68
CCDC58-203ENST00000466854 DCBLD1Q8N8Z6 715 aa4.56□□□□□ -1.68
CCDC58-203ENST00000466854 NLGN4YQ8NFZ3 816 aaPredicted RBP4.56□□□□□ -1.68
CCDC58-203ENST00000466854 PNKPQ96T60 521 aa4.56□□□□□ -1.68
CCDC58-203ENST00000466854 MAN1C1Q9NR34 630 aa4.56□□□□□ -1.68
CCDC58-203ENST00000466854 VSX1Q9NZR4 365 aaPredicted RBP4.56□□□□□ -1.68
CCDC58-203ENST00000466854 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.56□□□□□ -1.68
CCDC58-203ENST00000466854 PCDHB1Q9Y5F3 818 aa4.56□□□□□ -1.68
CCDC58-203ENST00000466854 CGB1A6NKQ9 187 aa4.55□□□□□ -1.68
CCDC58-203ENST00000466854 SGTAO43765 313 aa4.55□□□□□ -1.68
CCDC58-203ENST00000466854 DTNBO60941 627 aa4.55□□□□□ -1.68
CCDC58-203ENST00000466854 ZRANB2O95218 330 aaKnown RBP eCLIP4.55□□□□□ -1.68
CCDC58-203ENST00000466854 CD1AP06126 327 aa4.55□□□□□ -1.68
CCDC58-203ENST00000466854 RAB39AQ14964 217 aa4.55□□□□□ -1.68
CCDC58-203ENST00000466854 TTF1Q15361 905 aaPredicted RBP4.55□□□□□ -1.68
CCDC58-203ENST00000466854 SF3B3Q15393 1217 aaKnown RBP4.55□□□□□ -1.68
CCDC58-203ENST00000466854 UTP14CQ5TAP6 766 aaKnown RBP4.55□□□□□ -1.68
CCDC58-203ENST00000466854 KIAA0895LQ68EN5 471 aa4.55□□□□□ -1.68
CCDC58-203ENST00000466854 CATIPQ7Z7H3 387 aa4.55□□□□□ -1.68
CCDC58-203ENST00000466854 COLGALT2Q8IYK4 626 aa4.55□□□□□ -1.68
CCDC58-203ENST00000466854 IFI44Q8TCB0 444 aa4.55□□□□□ -1.68
CCDC58-203ENST00000466854 STAG1Q8WVM7 1258 aa4.55□□□□□ -1.68
CCDC58-203ENST00000466854 ANKS1AQ92625 1134 aa4.55□□□□□ -1.68
CCDC58-203ENST00000466854 MED15Q96RN5 788 aa4.55□□□□□ -1.68
CCDC58-203ENST00000466854 PACSIN1Q9BY11 444 aa4.55□□□□□ -1.68
CCDC58-203ENST00000466854 MYH16Q9H6N6 1097 aa4.55□□□□□ -1.68
CCDC58-203ENST00000466854 SLAMF7Q9NQ25 335 aa4.55□□□□□ -1.68
CCDC58-203ENST00000466854 IL17RBQ9NRM6 502 aa4.55□□□□□ -1.68
CCDC58-203ENST00000466854 ASB6Q9NWX5 421 aa4.55□□□□□ -1.68
CCDC58-203ENST00000466854 SLC17A6Q9P2U8 582 aa4.55□□□□□ -1.68
CCDC58-203ENST00000466854 ARPP21Q9UBL0 812 aaPredicted RBP4.55□□□□□ -1.68
CCDC58-203ENST00000466854 DMTF1Q9Y222 760 aa4.55□□□□□ -1.68
CCDC58-203ENST00000466854 PCDHA3Q9Y5H8 950 aa4.55□□□□□ -1.68
CCDC58-203ENST00000466854 CFAP20Q9Y6A4 193 aaKnown RBP4.55□□□□□ -1.68
CCDC58-203ENST00000466854 WDR62O43379 1518 aa4.55□□□□□ -1.68
CCDC58-203ENST00000466854 TRGV11A0A075B6L2 103 aa4.54□□□□□ -1.68
CCDC58-203ENST00000466854 LRRC14BA6NHZ5 514 aa4.54□□□□□ -1.68
CCDC58-203ENST00000466854 PROP1O75360 226 aa4.54□□□□□ -1.68
CCDC58-203ENST00000466854 AGFG2O95081 481 aa4.54□□□□□ -1.68
CCDC58-203ENST00000466854 SBK3P0C264 359 aa4.54□□□□□ -1.68
CCDC58-203ENST00000466854 PABPC1LQ4VXU2 614 aaKnown RBP4.54□□□□□ -1.68
CCDC58-203ENST00000466854 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.54□□□□□ -1.68
CCDC58-203ENST00000466854 SH2D3CQ8N5H7 860 aa4.54□□□□□ -1.68
CCDC58-203ENST00000466854 AOPEPQ8N6M6 819 aa4.54□□□□□ -1.68
CCDC58-203ENST00000466854 EVI5LQ96CN4 794 aa4.54□□□□□ -1.68
CCDC58-203ENST00000466854 TLR10Q9BXR5 811 aa4.54□□□□□ -1.68
CCDC58-203ENST00000466854 TYW1Q9NV66 732 aaKnown RBP4.54□□□□□ -1.68
CCDC58-203ENST00000466854 ANKRD6Q9Y2G4 727 aa4.54□□□□□ -1.68
CCDC58-203ENST00000466854 HMGXB3Q12766 1538 aa4.53□□□□□ -1.68
CCDC58-203ENST00000466854 A0A1W2PS29 197 aa4.53□□□□□ -1.68
CCDC58-203ENST00000466854 PEX1O43933 1283 aa4.53□□□□□ -1.68
CCDC58-203ENST00000466854 HAUS5O94927 633 aa4.53□□□□□ -1.68
CCDC58-203ENST00000466854 MAP4K4O95819 1239 aaPredicted RBP4.53□□□□□ -1.68
CCDC58-203ENST00000466854 FTLP02792 175 aaPredicted RBP4.53□□□□□ -1.68
CCDC58-203ENST00000466854 CENPBP07199 599 aaPredicted RBP4.53□□□□□ -1.68
CCDC58-203ENST00000466854 VCAM1P19320 739 aa4.53□□□□□ -1.68
CCDC58-203ENST00000466854 MALP21145 153 aa4.53□□□□□ -1.68
CCDC58-203ENST00000466854 FOLR3P41439 243 aa4.53□□□□□ -1.68
CCDC58-203ENST00000466854 MAPK10P53779 464 aa4.53□□□□□ -1.68
CCDC58-203ENST00000466854 TLE1Q04724 770 aa4.53□□□□□ -1.68
CCDC58-203ENST00000466854 VWA1Q6PCB0 445 aa4.53□□□□□ -1.68
CCDC58-203ENST00000466854 USP45Q70EL2 814 aa4.53□□□□□ -1.68
CCDC58-203ENST00000466854 GRAMD1CQ8IYS0 662 aa4.53□□□□□ -1.68
CCDC58-203ENST00000466854 NME8Q8N427 588 aa4.53□□□□□ -1.68
CCDC58-203ENST00000466854 C3orf20Q8ND61 904 aa4.53□□□□□ -1.68
CCDC58-203ENST00000466854 SLC17A8Q8NDX2 589 aa4.53□□□□□ -1.68
CCDC58-203ENST00000466854 MRGPRX4Q96LA9 322 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms