RNA–Protein interactions for RNA: ENST00000466708.5

CCDC78-207, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-207ENST00000466708 ITGA11Q9UKX5 1188 aa21.8■■□□□ 1.08
CCDC78-207ENST00000466708 MTUS1Q9ULD2 1270 aa21.8■■□□□ 1.08
CCDC78-207ENST00000466708 UTP11Q9Y3A2 253 aaKnown RBP21.8■■□□□ 1.08
CCDC78-207ENST00000466708 NR2E1Q9Y466 385 aa21.8■■□□□ 1.08
CCDC78-207ENST00000466708 HAS3O00219 553 aa21.79■■□□□ 1.08
CCDC78-207ENST00000466708 MED7O43513 233 aa21.79■■□□□ 1.08
CCDC78-207ENST00000466708 GPR32O75388 356 aa21.79■■□□□ 1.08
CCDC78-207ENST00000466708 STAU1O95793 577 aaKnown RBP21.79■■□□□ 1.08
CCDC78-207ENST00000466708 BRD2P25440 801 aaKnown RBP21.79■■□□□ 1.08
CCDC78-207ENST00000466708 CHRNA3P32297 505 aa21.79■■□□□ 1.08
CCDC78-207ENST00000466708 CYP2C19P33261 490 aa21.79■■□□□ 1.08
CCDC78-207ENST00000466708 LACTBP83111 547 aaPredicted RBP21.79■■□□□ 1.08
CCDC78-207ENST00000466708 ZNF394Q53GI3 561 aa21.79■■□□□ 1.08
CCDC78-207ENST00000466708 ALS2CLQ60I27 953 aa21.79■■□□□ 1.08
CCDC78-207ENST00000466708 MREGQ8N565 214 aa21.79■■□□□ 1.08
CCDC78-207ENST00000466708 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.79■■□□□ 1.08
CCDC78-207ENST00000466708 RUNDC3BQ96NL0 473 aa21.79■■□□□ 1.08
CCDC78-207ENST00000466708 RAB17Q9H0T7 212 aa21.79■■□□□ 1.08
CCDC78-207ENST00000466708 PLEKHA4Q9H4M7 779 aa21.79■■□□□ 1.08
CCDC78-207ENST00000466708 PLEKHA5Q9HAU0 1116 aa21.79■■□□□ 1.08
CCDC78-207ENST00000466708 GJD2Q9UKL4 321 aa21.79■■□□□ 1.08
CCDC78-207ENST00000466708 FAM187AA6NFU0 413 aa21.78■■□□□ 1.08
CCDC78-207ENST00000466708 POLR3GO15318 223 aaPredicted RBP21.78■■□□□ 1.08
CCDC78-207ENST00000466708 PHF2O75151 1096 aa21.78■■□□□ 1.08
CCDC78-207ENST00000466708 CYP2C9P11712 490 aa21.78■■□□□ 1.08
CCDC78-207ENST00000466708 CYP2B6P20813 491 aa21.78■■□□□ 1.08
CCDC78-207ENST00000466708 PSEN2P49810 448 aa21.78■■□□□ 1.08
CCDC78-207ENST00000466708 TERF2Q15554 542 aa21.78■■□□□ 1.08
CCDC78-207ENST00000466708 SLC13A5Q86YT5 568 aaPredicted RBP21.78■■□□□ 1.08
CCDC78-207ENST00000466708 FAM49AQ9H0Q0 323 aaPredicted RBP21.78■■□□□ 1.08
CCDC78-207ENST00000466708 FAM114A2Q9NRY5 505 aa21.78■■□□□ 1.08
CCDC78-207ENST00000466708 POLIQ9UNA4 740 aa21.78■■□□□ 1.08
CCDC78-207ENST00000466708 DERAQ9Y315 318 aa21.78■■□□□ 1.08
CCDC78-207ENST00000466708 CITO14578 2027 aa21.78■■□□□ 1.08
CCDC78-207ENST00000466708 GOLGA6BA6NDN3 693 aa21.78■■□□□ 1.08
CCDC78-207ENST00000466708 TTI1O43156 1089 aa21.78■■□□□ 1.08
CCDC78-207ENST00000466708 IGHA2P01877 340 aa21.78■■□□□ 1.08
CCDC78-207ENST00000466708 MAN1A1P33908 653 aa21.78■■□□□ 1.08
CCDC78-207ENST00000466708 ADAM17P78536 824 aa21.78■■□□□ 1.08
CCDC78-207ENST00000466708 RBP5P82980 135 aa21.78■■□□□ 1.08
CCDC78-207ENST00000466708 CCL14Q16627 93 aa21.78■■□□□ 1.08
CCDC78-207ENST00000466708 C2CD6Q53TS8 623 aa21.78■■□□□ 1.08
CCDC78-207ENST00000466708 AADACL2Q6P093 401 aa21.78■■□□□ 1.08
CCDC78-207ENST00000466708 SLC27A1Q6PCB7 646 aa21.78■■□□□ 1.08
CCDC78-207ENST00000466708 CATSPER4Q7RTX7 472 aa21.78■■□□□ 1.08
CCDC78-207ENST00000466708 TTC39CQ8N584 583 aa21.78■■□□□ 1.08
CCDC78-207ENST00000466708 FEZF2Q8TBJ5 459 aa21.78■■□□□ 1.08
CCDC78-207ENST00000466708 KATNAL1Q9BW62 490 aa21.78■■□□□ 1.08
CCDC78-207ENST00000466708 LHX5Q9H2C1 402 aa21.78■■□□□ 1.08
CCDC78-207ENST00000466708 ECM2O94769 699 aaPredicted RBP21.77■■□□□ 1.08
CCDC78-207ENST00000466708 HOXA11P31270 313 aaPredicted RBP21.77■■□□□ 1.08
CCDC78-207ENST00000466708 SSTR3P32745 418 aaPredicted RBP21.77■■□□□ 1.08
CCDC78-207ENST00000466708 DR1Q01658 176 aa21.77■■□□□ 1.08
CCDC78-207ENST00000466708 TAP1Q03518 808 aa21.77■■□□□ 1.08
CCDC78-207ENST00000466708 SREBF2Q12772 1141 aa21.77■■□□□ 1.08
CCDC78-207ENST00000466708 HLTFQ14527 1009 aaKnown RBP eCLIP21.77■■□□□ 1.08
CCDC78-207ENST00000466708 CYP1B1Q16678 543 aa21.77■■□□□ 1.08
CCDC78-207ENST00000466708 CPNE8Q86YQ8 564 aa21.77■■□□□ 1.08
CCDC78-207ENST00000466708 MAIP1Q8WWC4 291 aa21.77■■□□□ 1.08
CCDC78-207ENST00000466708 TRIM7Q9C029 511 aa21.77■■□□□ 1.08
CCDC78-207ENST00000466708 ERVK-5Q9HDB9 667 aa21.77■■□□□ 1.08
CCDC78-207ENST00000466708 PCYOX1Q9UHG3 505 aa21.77■■□□□ 1.08
CCDC78-207ENST00000466708 RASAL2Q9UJF2 1139 aa21.77■■□□□ 1.08
CCDC78-207ENST00000466708 TNPO2O14787 897 aaKnown RBP21.76■■□□□ 1.07
CCDC78-207ENST00000466708 TLR3O15455 904 aaKnown RBP21.76■■□□□ 1.07
CCDC78-207ENST00000466708 PSTPIP1O43586 416 aa21.76■■□□□ 1.07
CCDC78-207ENST00000466708 DARSP14868 501 aaKnown RBP21.76■■□□□ 1.07
CCDC78-207ENST00000466708 AXLP30530 894 aa21.76■■□□□ 1.07
CCDC78-207ENST00000466708 NOTUMQ6P988 496 aa21.76■■□□□ 1.07
CCDC78-207ENST00000466708 ADAT2Q7Z6V5 191 aaKnown RBP21.76■■□□□ 1.07
CCDC78-207ENST00000466708 PHLDB2Q86SQ0 1253 aa21.76■■□□□ 1.07
CCDC78-207ENST00000466708 PRELID2Q8N945 189 aa21.76■■□□□ 1.07
CCDC78-207ENST00000466708 TFAP2BQ92481 460 aa21.76■■□□□ 1.07
CCDC78-207ENST00000466708 HPDLQ96IR7 371 aa21.76■■□□□ 1.07
CCDC78-207ENST00000466708 DPP3Q9NY33 737 aa21.76■■□□□ 1.07
CCDC78-207ENST00000466708 IP6K2Q9UHH9 426 aa21.76■■□□□ 1.07
CCDC78-207ENST00000466708 FSCN2O14926 492 aa21.76■■□□□ 1.07
CCDC78-207ENST00000466708 POLR2BP30876 1174 aaKnown RBP21.76■■□□□ 1.07
CCDC78-207ENST00000466708 LLGL2Q6P1M3 1020 aa21.76■■□□□ 1.07
CCDC78-207ENST00000466708 ERICH1Q86X53 443 aa21.76■■□□□ 1.07
CCDC78-207ENST00000466708 C1orf131Q8NDD1 294 aaKnown RBP21.76■■□□□ 1.07
CCDC78-207ENST00000466708 STRIP2Q9ULQ0 834 aa21.76■■□□□ 1.07
CCDC78-207ENST00000466708 AGAP1Q9UPQ3 857 aa21.76■■□□□ 1.07
CCDC78-207ENST00000466708 HSF2BPO75031 334 aa21.75■■□□□ 1.07
CCDC78-207ENST00000466708 CILPO75339 1184 aa21.75■■□□□ 1.07
CCDC78-207ENST00000466708 NPTXRO95502 500 aa21.75■■□□□ 1.07
CCDC78-207ENST00000466708 SYF2O95926 243 aaKnown RBP21.75■■□□□ 1.07
CCDC78-207ENST00000466708 FAM153BP0C7A2 387 aa21.75■■□□□ 1.07
CCDC78-207ENST00000466708 FGFR4P22455 802 aa21.75■■□□□ 1.07
CCDC78-207ENST00000466708 RAD23BP54727 409 aa21.75■■□□□ 1.07
CCDC78-207ENST00000466708 TRADDQ15628 312 aa21.75■■□□□ 1.07
CCDC78-207ENST00000466708 FAM153CQ494X1 144 aa21.75■■□□□ 1.07
CCDC78-207ENST00000466708 RHOT1Q8IXI2 618 aa21.75■■□□□ 1.07
CCDC78-207ENST00000466708 MAGOHBQ96A72 148 aaKnown RBP21.75■■□□□ 1.07
CCDC78-207ENST00000466708 KIF12Q96FN5 646 aa21.75■■□□□ 1.07
CCDC78-207ENST00000466708 ERP44Q9BS26 406 aa21.75■■□□□ 1.07
CCDC78-207ENST00000466708 CELF4Q9BZC1 486 aaKnown RBP21.75■■□□□ 1.07
CCDC78-207ENST00000466708 FAM153AQ9UHL3 310 aa21.75■■□□□ 1.07
CCDC78-207ENST00000466708 GINS2Q9Y248 185 aa21.75■■□□□ 1.07
CCDC78-207ENST00000466708 PODXLO00592 558 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms