RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 NLRP5P59047 1200 aa16.14■□□□□ 0.17
HMGXB4-206ENST00000466438 ANAPC15P60006 121 aa16.14■□□□□ 0.17
HMGXB4-206ENST00000466438 FAM193AP78312 1265 aa16.14■□□□□ 0.17
HMGXB4-206ENST00000466438 AMPD2Q01433 879 aa16.14■□□□□ 0.17
HMGXB4-206ENST00000466438 CTTNQ14247 550 aaKnown RBP16.14■□□□□ 0.17
HMGXB4-206ENST00000466438 TMEM132AQ24JP5 1023 aa16.14■□□□□ 0.17
HMGXB4-206ENST00000466438 CDCA2Q69YH5 1023 aaPredicted RBP16.14■□□□□ 0.17
HMGXB4-206ENST00000466438 RNF19BQ6ZMZ0 732 aa16.14■□□□□ 0.17
HMGXB4-206ENST00000466438 DHX32Q7L7V1 743 aaKnown RBP16.14■□□□□ 0.17
HMGXB4-206ENST00000466438 DYDC2Q96IM9 177 aa16.14■□□□□ 0.17
HMGXB4-206ENST00000466438 DNAJC25Q9H1X3 360 aa16.14■□□□□ 0.17
HMGXB4-206ENST00000466438 KCNMB3Q9NPA1 279 aa16.14■□□□□ 0.17
HMGXB4-206ENST00000466438 FGF19O95750 216 aa16.13■□□□□ 0.17
HMGXB4-206ENST00000466438 CPB1P15086 417 aa16.13■□□□□ 0.17
HMGXB4-206ENST00000466438 EPHB3P54753 998 aa16.13■□□□□ 0.17
HMGXB4-206ENST00000466438 CYP4A11Q02928 519 aa16.13■□□□□ 0.17
HMGXB4-206ENST00000466438 PRPF4BQ13523 1007 aaKnown RBP16.13■□□□□ 0.17
HMGXB4-206ENST00000466438 RUNX3Q13761 415 aa16.13■□□□□ 0.17
HMGXB4-206ENST00000466438 HNRNPDQ14103 355 aaKnown RBP16.13■□□□□ 0.17
HMGXB4-206ENST00000466438 ARHGAP15Q53QZ3 475 aa16.13■□□□□ 0.17
HMGXB4-206ENST00000466438 GPR158Q5T848 1215 aa16.13■□□□□ 0.17
HMGXB4-206ENST00000466438 RNF20Q5VTR2 975 aa16.13■□□□□ 0.17
HMGXB4-206ENST00000466438 PPP4R3AQ6IN85 833 aa16.13■□□□□ 0.17
HMGXB4-206ENST00000466438 CCNI2Q6ZMN8 369 aaPredicted RBP16.13■□□□□ 0.17
HMGXB4-206ENST00000466438 GAREM2Q75VX8 874 aa16.13■□□□□ 0.17
HMGXB4-206ENST00000466438 ZBTB8OSQ8IWT0 167 aa16.13■□□□□ 0.17
HMGXB4-206ENST00000466438 HDDC3Q8N4P3 179 aa16.13■□□□□ 0.17
HMGXB4-206ENST00000466438 BEST2Q8NFU1 509 aa16.13■□□□□ 0.17
HMGXB4-206ENST00000466438 TSTD1Q8NFU3 115 aa16.13■□□□□ 0.17
HMGXB4-206ENST00000466438 UBL7Q96S82 380 aaPredicted RBP16.13■□□□□ 0.17
HMGXB4-206ENST00000466438 FAM83CQ9BQN1 747 aa16.13■□□□□ 0.17
HMGXB4-206ENST00000466438 RNF26Q9BY78 433 aaPredicted RBP16.13■□□□□ 0.17
HMGXB4-206ENST00000466438 TPSD1Q9BZJ3 242 aa16.13■□□□□ 0.17
HMGXB4-206ENST00000466438 ATXN3LQ9H3M9 355 aa16.13■□□□□ 0.17
HMGXB4-206ENST00000466438 FBRSL1Q9HCM7 1045 aaKnown RBP16.13■□□□□ 0.17
HMGXB4-206ENST00000466438 HPS4Q9NQG7 708 aa16.13■□□□□ 0.17
HMGXB4-206ENST00000466438 SH3GLB2Q9NR46 395 aa16.13■□□□□ 0.17
HMGXB4-206ENST00000466438 GKN1Q9NS71 199 aa16.13■□□□□ 0.17
HMGXB4-206ENST00000466438 PODXLO00592 558 aa16.12■□□□□ 0.17
HMGXB4-206ENST00000466438 PRB1P04280 392 aa16.12■□□□□ 0.17
HMGXB4-206ENST00000466438 PLA2G2AP14555 144 aa16.12■□□□□ 0.17
HMGXB4-206ENST00000466438 SOX4Q06945 474 aaPredicted RBP16.12■□□□□ 0.17
HMGXB4-206ENST00000466438 BECN1Q14457 450 aa16.12■□□□□ 0.17
HMGXB4-206ENST00000466438 DCAF4L1Q3SXM0 396 aa16.12■□□□□ 0.17
HMGXB4-206ENST00000466438 MDM1Q8TC05 714 aa16.12■□□□□ 0.17
HMGXB4-206ENST00000466438 ADAMTS14Q8WXS8 1223 aa16.12■□□□□ 0.17
HMGXB4-206ENST00000466438 EXOC4Q96A65 974 aa16.12■□□□□ 0.17
HMGXB4-206ENST00000466438 DAXXQ9UER7 740 aaPredicted RBP16.12■□□□□ 0.17
HMGXB4-206ENST00000466438 PCDHA4Q9UN74 947 aa16.12■□□□□ 0.17
HMGXB4-206ENST00000466438 NID2Q14112 1375 aa16.12■□□□□ 0.17
HMGXB4-206ENST00000466438 SMIM28A0A1B0GU29 152 aa16.11■□□□□ 0.17
HMGXB4-206ENST00000466438 OTOL1A6NHN0 477 aaPredicted RBP16.11■□□□□ 0.17
HMGXB4-206ENST00000466438 TK2O00142 265 aa16.11■□□□□ 0.17
HMGXB4-206ENST00000466438 TNFRSF10BO14763 440 aa16.11■□□□□ 0.17
HMGXB4-206ENST00000466438 C1QL1O75973 258 aa16.11■□□□□ 0.17
HMGXB4-206ENST00000466438 HSPA4P34932 840 aa16.11■□□□□ 0.17
HMGXB4-206ENST00000466438 RABEP1Q15276 862 aa16.11■□□□□ 0.17
HMGXB4-206ENST00000466438 NCAPH2Q6IBW4 605 aa16.11■□□□□ 0.17
HMGXB4-206ENST00000466438 SLC23A3Q6PIS1 610 aa16.11■□□□□ 0.17
HMGXB4-206ENST00000466438 RASSF3Q86WH2 238 aa16.11■□□□□ 0.17
HMGXB4-206ENST00000466438 SYT12Q8IV01 421 aa16.11■□□□□ 0.17
HMGXB4-206ENST00000466438 TPH2Q8IWU9 490 aa16.11■□□□□ 0.17
HMGXB4-206ENST00000466438 SUSD3Q96L08 255 aa16.11■□□□□ 0.17
HMGXB4-206ENST00000466438 CCDC43Q96MW1 224 aaKnown RBP16.11■□□□□ 0.17
HMGXB4-206ENST00000466438 P2RY13Q9BPV8 354 aa16.11■□□□□ 0.17
HMGXB4-206ENST00000466438 POLR3CQ9BUI4 534 aaPredicted RBP16.11■□□□□ 0.17
HMGXB4-206ENST00000466438 TASP1Q9H6P5 420 aa16.11■□□□□ 0.17
HMGXB4-206ENST00000466438 ANKEF1Q9NU02 776 aa16.11■□□□□ 0.17
HMGXB4-206ENST00000466438 SLC38A7Q9NVC3 462 aa16.11■□□□□ 0.17
HMGXB4-206ENST00000466438 ASB3Q9Y575 518 aa16.11■□□□□ 0.17
HMGXB4-206ENST00000466438 NUB1Q9Y5A7 615 aa16.11■□□□□ 0.17
HMGXB4-206ENST00000466438 ASXL3Q9C0F0 2248 aa16.11■□□□□ 0.17
HMGXB4-206ENST00000466438 M0R2N6 131 aa16.1■□□□□ 0.17
HMGXB4-206ENST00000466438 SLITRK3O94933 977 aa16.1■□□□□ 0.17
HMGXB4-206ENST00000466438 LYPLA2O95372 231 aa16.1■□□□□ 0.17
HMGXB4-206ENST00000466438 VNN2O95498 520 aa16.1■□□□□ 0.17
HMGXB4-206ENST00000466438 GABRR2P28476 465 aa16.1■□□□□ 0.17
HMGXB4-206ENST00000466438 DPP6P42658 865 aa16.1■□□□□ 0.17
HMGXB4-206ENST00000466438 ALDH1A3P47895 512 aa16.1■□□□□ 0.17
HMGXB4-206ENST00000466438 GALK1P51570 392 aa16.1■□□□□ 0.17
HMGXB4-206ENST00000466438 ATXN3P54252 364 aaPredicted RBP16.1■□□□□ 0.17
HMGXB4-206ENST00000466438 MAPK6Q16659 721 aa16.1■□□□□ 0.17
HMGXB4-206ENST00000466438 EEF1DP3Q658K8 133 aa16.1■□□□□ 0.17
HMGXB4-206ENST00000466438 LPCAT2Q7L5N7 544 aa16.1■□□□□ 0.17
HMGXB4-206ENST00000466438 DAGLBQ8NCG7 672 aa16.1■□□□□ 0.17
HMGXB4-206ENST00000466438 APPL2Q8NEU8 664 aa16.1■□□□□ 0.17
HMGXB4-206ENST00000466438 PSMG2Q969U7 264 aa16.1■□□□□ 0.17
HMGXB4-206ENST00000466438 CNOT6LQ96LI5 555 aaKnown RBP16.1■□□□□ 0.17
HMGXB4-206ENST00000466438 C2orf40Q9H1Z8 148 aa16.1■□□□□ 0.17
HMGXB4-206ENST00000466438 EBF3Q9H4W6 596 aa16.1■□□□□ 0.17
HMGXB4-206ENST00000466438 DKK4Q9UBT3 224 aa16.1■□□□□ 0.17
HMGXB4-206ENST00000466438 MBD1Q9UIS9 605 aaPredicted RBP16.1■□□□□ 0.17
HMGXB4-206ENST00000466438 KIAA1549LQ6ZVL6 1849 aa16.1■□□□□ 0.17
HMGXB4-206ENST00000466438 TNRC6BQ9UPQ9 1833 aaKnown RBP16.1■□□□□ 0.17
HMGXB4-206ENST00000466438 TRIP11Q15643 1979 aa16.09■□□□□ 0.17
HMGXB4-206ENST00000466438 ACKR2O00590 384 aa16.09■□□□□ 0.17
HMGXB4-206ENST00000466438 OPHN1O60890 802 aa16.09■□□□□ 0.17
HMGXB4-206ENST00000466438 RARRES1P49788 294 aa16.09■□□□□ 0.17
HMGXB4-206ENST00000466438 INF2Q27J81 1249 aa16.09■□□□□ 0.17
HMGXB4-206ENST00000466438 TRIM68Q6AZZ1 485 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms