RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 GOLGA8IPA6NC78 632 aa19.17■□□□□ 0.66
COL7A1-205ENST00000465238 GOLGA8JA6NMD2 632 aa19.17■□□□□ 0.66
COL7A1-205ENST00000465238 LACTBL1A8MY62 500 aa19.17■□□□□ 0.66
COL7A1-205ENST00000465238 PDXKO00764 312 aa19.17■□□□□ 0.66
COL7A1-205ENST00000465238 PI15O43692 258 aa19.17■□□□□ 0.66
COL7A1-205ENST00000465238 NBL1P41271 181 aa19.17■□□□□ 0.66
COL7A1-205ENST00000465238 ISM2Q6H9L7 571 aa19.17■□□□□ 0.66
COL7A1-205ENST00000465238 CRELD2Q6UXH1 353 aaPredicted RBP19.17■□□□□ 0.66
COL7A1-205ENST00000465238 ANKS3Q6ZW76 656 aa19.17■□□□□ 0.66
COL7A1-205ENST00000465238 CCDC105Q8IYK2 499 aa19.17■□□□□ 0.66
COL7A1-205ENST00000465238 SLC7A14Q8TBB6 771 aa19.17■□□□□ 0.66
COL7A1-205ENST00000465238 TSPAN18Q96SJ8 248 aa19.17■□□□□ 0.66
COL7A1-205ENST00000465238 CLSTN2Q9H4D0 955 aa19.17■□□□□ 0.66
COL7A1-205ENST00000465238 GOLGA2P5Q9HBQ8 144 aa19.17■□□□□ 0.66
COL7A1-205ENST00000465238 KIAA1586Q9HCI6 787 aa19.17■□□□□ 0.66
COL7A1-205ENST00000465238 MAN1B1Q9UKM7 699 aa19.17■□□□□ 0.66
COL7A1-205ENST00000465238 CDH7Q9ULB5 785 aa19.17■□□□□ 0.66
COL7A1-205ENST00000465238 PDCD11Q14690 1871 aaKnown RBP19.17■□□□□ 0.66
COL7A1-205ENST00000465238 KRBA1A5PL33 1030 aa19.16■□□□□ 0.66
COL7A1-205ENST00000465238 STK25O00506 426 aa19.16■□□□□ 0.66
COL7A1-205ENST00000465238 CCL16O15467 120 aa19.16■□□□□ 0.66
COL7A1-205ENST00000465238 MEFVO15553 781 aaPredicted RBP19.16■□□□□ 0.66
COL7A1-205ENST00000465238 CALUO43852 315 aaPredicted RBP19.16■□□□□ 0.66
COL7A1-205ENST00000465238 IGFBP6P24592 240 aaPredicted RBP19.16■□□□□ 0.66
COL7A1-205ENST00000465238 TKTP29401 623 aaKnown RBP19.16■□□□□ 0.66
COL7A1-205ENST00000465238 CYP2J2P51589 502 aa19.16■□□□□ 0.66
COL7A1-205ENST00000465238 SPAG1Q07617 926 aa19.16■□□□□ 0.66
COL7A1-205ENST00000465238 CD300LGQ6UXG3 332 aa19.16■□□□□ 0.66
COL7A1-205ENST00000465238 C12orf56Q8IXR9 622 aa19.16■□□□□ 0.66
COL7A1-205ENST00000465238 SMYD4Q8IYR2 804 aaPredicted RBP19.16■□□□□ 0.66
COL7A1-205ENST00000465238 XXYLT1Q8NBI6 393 aa19.16■□□□□ 0.66
COL7A1-205ENST00000465238 C3orf58Q8NDZ4 430 aa19.16■□□□□ 0.66
COL7A1-205ENST00000465238 KIF12Q96FN5 646 aa19.16■□□□□ 0.66
COL7A1-205ENST00000465238 ZMAT2Q96NC0 199 aaKnown RBP19.16■□□□□ 0.66
COL7A1-205ENST00000465238 NUP62CLQ9H1M0 184 aa19.16■□□□□ 0.66
COL7A1-205ENST00000465238 KCTD10Q9H3F6 313 aa19.16■□□□□ 0.66
COL7A1-205ENST00000465238 ASB7Q9H672 318 aa19.16■□□□□ 0.66
COL7A1-205ENST00000465238 SLC2A4RGQ9NR83 387 aa19.16■□□□□ 0.66
COL7A1-205ENST00000465238 KIAA1468Q9P260 1216 aa19.16■□□□□ 0.66
COL7A1-205ENST00000465238 POLIQ9UNA4 740 aa19.16■□□□□ 0.66
COL7A1-205ENST00000465238 CDY1Q9Y6F8 540 aa19.16■□□□□ 0.66
COL7A1-205ENST00000465238 NUMBLQ9Y6R0 609 aa19.16■□□□□ 0.66
COL7A1-205ENST00000465238 FAM186AA6NE01 2351 aa19.15■□□□□ 0.66
COL7A1-205ENST00000465238 ZNF233A6NK53 670 aa19.15■□□□□ 0.66
COL7A1-205ENST00000465238 BIN1O00499 593 aa19.15■□□□□ 0.66
COL7A1-205ENST00000465238 XPOTO43592 962 aaKnown RBP19.15■□□□□ 0.66
COL7A1-205ENST00000465238 IL18RAPO95256 599 aa19.15■□□□□ 0.66
COL7A1-205ENST00000465238 ADRB2P07550 413 aa19.15■□□□□ 0.66
COL7A1-205ENST00000465238 RFX1P22670 979 aa19.15■□□□□ 0.66
COL7A1-205ENST00000465238 NTHL1P78549 312 aa19.15■□□□□ 0.66
COL7A1-205ENST00000465238 SOX4Q06945 474 aaPredicted RBP19.15■□□□□ 0.66
COL7A1-205ENST00000465238 STIM1Q13586 685 aa19.15■□□□□ 0.66
COL7A1-205ENST00000465238 DTWD2Q8NBA8 298 aa19.15■□□□□ 0.66
COL7A1-205ENST00000465238 ZSWIM2Q8NEG5 633 aa19.15■□□□□ 0.66
COL7A1-205ENST00000465238 GPT2Q8TD30 523 aa19.15■□□□□ 0.66
COL7A1-205ENST00000465238 GPR152Q8TDT2 470 aa19.15■□□□□ 0.66
COL7A1-205ENST00000465238 RBAKQ9NYW8 714 aaPredicted RBP19.15■□□□□ 0.66
COL7A1-205ENST00000465238 CA14Q9ULX7 337 aa19.15■□□□□ 0.66
COL7A1-205ENST00000465238 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.15■□□□□ 0.66
COL7A1-205ENST00000465238 ANK1P16157 1881 aa19.15■□□□□ 0.66
COL7A1-205ENST00000465238 WDR87Q6ZQQ6 2873 aa19.14■□□□□ 0.65
COL7A1-205ENST00000465238 I3L4J1 428 aa19.14■□□□□ 0.65
COL7A1-205ENST00000465238 PODXLO00592 558 aa19.14■□□□□ 0.65
COL7A1-205ENST00000465238 EXOC3O60645 756 aa19.14■□□□□ 0.65
COL7A1-205ENST00000465238 MBD3O95983 291 aa19.14■□□□□ 0.65
COL7A1-205ENST00000465238 MCM4P33991 863 aa19.14■□□□□ 0.65
COL7A1-205ENST00000465238 PRCPP42785 496 aa19.14■□□□□ 0.65
COL7A1-205ENST00000465238 BRCC3P46736 316 aa19.14■□□□□ 0.65
COL7A1-205ENST00000465238 COBLL1Q53SF7 1204 aa19.14■□□□□ 0.65
COL7A1-205ENST00000465238 PHLDB3Q6NSJ2 640 aa19.14■□□□□ 0.65
COL7A1-205ENST00000465238 RSPO2Q6UXX9 243 aaPredicted RBP19.14■□□□□ 0.65
COL7A1-205ENST00000465238 MTSS1LQ765P7 747 aa19.14■□□□□ 0.65
COL7A1-205ENST00000465238 BRSK2Q8IWQ3 736 aa19.14■□□□□ 0.65
COL7A1-205ENST00000465238 RDH13Q8NBN7 331 aa19.14■□□□□ 0.65
COL7A1-205ENST00000465238 FGF13Q92913 245 aa19.14■□□□□ 0.65
COL7A1-205ENST00000465238 C18orf25Q96B23 403 aaPredicted RBP19.14■□□□□ 0.65
COL7A1-205ENST00000465238 TBC1D17Q9HA65 648 aa19.14■□□□□ 0.65
COL7A1-205ENST00000465238 ARHGEF3Q9NR81 526 aa19.14■□□□□ 0.65
COL7A1-205ENST00000465238 UBQLN1Q9UMX0 589 aaKnown RBP19.14■□□□□ 0.65
COL7A1-205ENST00000465238 TRAF3IP3Q9Y228 551 aa19.14■□□□□ 0.65
COL7A1-205ENST00000465238 DERAQ9Y315 318 aa19.14■□□□□ 0.65
COL7A1-205ENST00000465238 DMDP11532 3685 aa19.14■□□□□ 0.65
COL7A1-205ENST00000465238 SYN3O14994 580 aa19.13■□□□□ 0.65
COL7A1-205ENST00000465238 NR3C1P04150 777 aa19.13■□□□□ 0.65
COL7A1-205ENST00000465238 RPL9P32969 192 aaKnown RBP19.13■□□□□ 0.65
COL7A1-205ENST00000465238 PPP1R2P41236 205 aa19.13■□□□□ 0.65
COL7A1-205ENST00000465238 MORC3Q14149 939 aa19.13■□□□□ 0.65
COL7A1-205ENST00000465238 TMEM132DQ14C87 1099 aa19.13■□□□□ 0.65
COL7A1-205ENST00000465238 ANGPT1Q15389 498 aa19.13■□□□□ 0.65
COL7A1-205ENST00000465238 JADE1Q6IE81 842 aa19.13■□□□□ 0.65
COL7A1-205ENST00000465238 SLC8B1Q6J4K2 584 aa19.13■□□□□ 0.65
COL7A1-205ENST00000465238 CBWD2Q8IUF1 395 aa19.13■□□□□ 0.65
COL7A1-205ENST00000465238 TRIML1Q8N9V2 468 aa19.13■□□□□ 0.65
COL7A1-205ENST00000465238 ZNF461Q8TAF7 563 aa19.13■□□□□ 0.65
COL7A1-205ENST00000465238 FGF14Q92915 247 aa19.13■□□□□ 0.65
COL7A1-205ENST00000465238 NOTCH4Q99466 2003 aa19.13■□□□□ 0.65
COL7A1-205ENST00000465238 CYP3A5P20815 502 aa19.12■□□□□ 0.65
COL7A1-205ENST00000465238 RPL13P26373 211 aaKnown RBP19.12■□□□□ 0.65
COL7A1-205ENST00000465238 MYBPC2Q14324 1141 aa19.12■□□□□ 0.65
COL7A1-205ENST00000465238 SURF1Q15526 300 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms