RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 RAB44Q7Z6P3 723 aaPredicted RBP10.42□□□□□ -0.74
APP-213ENST00000464867 TTC8Q8TAM2 541 aa10.42□□□□□ -0.74
APP-213ENST00000464867 IGDCC4Q8TDY8 1250 aa10.42□□□□□ -0.74
APP-213ENST00000464867 PSPC1Q8WXF1 523 aaKnown RBP10.42□□□□□ -0.74
APP-213ENST00000464867 SLC7A3Q8WY07 619 aa10.42□□□□□ -0.74
APP-213ENST00000464867 ZSWIM3Q96MP5 696 aa10.42□□□□□ -0.74
APP-213ENST00000464867 EIF2AQ9BY44 585 aaKnown RBP10.42□□□□□ -0.74
APP-213ENST00000464867 PARP2Q9UGN5 583 aa10.42□□□□□ -0.74
APP-213ENST00000464867 PI4KAP42356 2102 aa10.42□□□□□ -0.74
APP-213ENST00000464867 CCDC194A0A1B0GVG4 234 aa10.41□□□□□ -0.74
APP-213ENST00000464867 UPK3BL1B0FP48 263 aa10.41□□□□□ -0.74
APP-213ENST00000464867 PATE3B3GLJ2 98 aa10.41□□□□□ -0.74
APP-213ENST00000464867 UPK3BL2E5RIL1 263 aa10.41□□□□□ -0.74
APP-213ENST00000464867 J3QKU1 62 aa10.41□□□□□ -0.74
APP-213ENST00000464867 DCLK1O15075 740 aa10.41□□□□□ -0.74
APP-213ENST00000464867 GAS7O60861 476 aa10.41□□□□□ -0.74
APP-213ENST00000464867 MYL4P12829 197 aa10.41□□□□□ -0.74
APP-213ENST00000464867 AKAP5P24588 427 aa10.41□□□□□ -0.74
APP-213ENST00000464867 FCHO2Q0JRZ9 810 aa10.41□□□□□ -0.74
APP-213ENST00000464867 UGCGQ16739 394 aa10.41□□□□□ -0.74
APP-213ENST00000464867 RNFT1Q5M7Z0 435 aa10.41□□□□□ -0.74
APP-213ENST00000464867 JAKMIP3Q5VZ66 844 aa10.41□□□□□ -0.74
APP-213ENST00000464867 WWC2Q6AWC2 1192 aa10.41□□□□□ -0.74
APP-213ENST00000464867 ANKS3Q6ZW76 656 aa10.41□□□□□ -0.74
APP-213ENST00000464867 ZNF461Q8TAF7 563 aa10.41□□□□□ -0.74
APP-213ENST00000464867 PRPF31Q8WWY3 499 aaKnown RBP10.41□□□□□ -0.74
APP-213ENST00000464867 PIGKQ92643 395 aa10.41□□□□□ -0.74
APP-213ENST00000464867 HHIPQ96QV1 700 aa10.41□□□□□ -0.74
APP-213ENST00000464867 TMEM209Q96SK2 561 aa10.41□□□□□ -0.74
APP-213ENST00000464867 SH2D3AQ9BRG2 576 aa10.41□□□□□ -0.74
APP-213ENST00000464867 CSRNP2Q9H175 543 aa10.41□□□□□ -0.74
APP-213ENST00000464867 ASAH2Q9NR71 780 aa10.41□□□□□ -0.74
APP-213ENST00000464867 GTSE1Q9NYZ3 720 aa10.41□□□□□ -0.74
APP-213ENST00000464867 KLK14Q9P0G3 267 aa10.41□□□□□ -0.74
APP-213ENST00000464867 MTRRQ9UBK8 725 aa10.41□□□□□ -0.74
APP-213ENST00000464867 EVLQ9UI08 416 aaPredicted RBP10.41□□□□□ -0.74
APP-213ENST00000464867 ZMYM2Q9UBW7 1377 aa10.4□□□□□ -0.74
APP-213ENST00000464867 USP9XQ93008 2570 aaPredicted RBP10.4□□□□□ -0.74
APP-213ENST00000464867 CAPN8A6NHC0 703 aa10.4□□□□□ -0.74
APP-213ENST00000464867 CASTOR2A6NHX0 329 aa10.4□□□□□ -0.74
APP-213ENST00000464867 hCG_1984214I3L0E3 225 aa10.4□□□□□ -0.74
APP-213ENST00000464867 CAPN9O14815 690 aa10.4□□□□□ -0.74
APP-213ENST00000464867 ASAP2O43150 1006 aa10.4□□□□□ -0.74
APP-213ENST00000464867 TRAPPC3O43617 180 aa10.4□□□□□ -0.74
APP-213ENST00000464867 KIF4AO95239 1232 aa10.4□□□□□ -0.74
APP-213ENST00000464867 APBB3O95704 486 aa10.4□□□□□ -0.74
APP-213ENST00000464867 SCTRP47872 440 aa10.4□□□□□ -0.74
APP-213ENST00000464867 DHPSP49366 369 aaPredicted RBP10.4□□□□□ -0.74
APP-213ENST00000464867 AMPD2Q01433 879 aa10.4□□□□□ -0.74
APP-213ENST00000464867 LAMTOR4Q0VGL1 99 aa10.4□□□□□ -0.74
APP-213ENST00000464867 SEMA3BQ13214 749 aa10.4□□□□□ -0.74
APP-213ENST00000464867 TRIM61Q5EBN2 209 aa10.4□□□□□ -0.74
APP-213ENST00000464867 WDR44Q5JSH3 913 aa10.4□□□□□ -0.74
APP-213ENST00000464867 PMS2CLQ68D20 193 aa10.4□□□□□ -0.74
APP-213ENST00000464867 MIER3Q7Z3K6 550 aa10.4□□□□□ -0.74
APP-213ENST00000464867 PIP4P1Q86T03 277 aa10.4□□□□□ -0.74
APP-213ENST00000464867 ZNF713Q8N859 430 aaPredicted RBP10.4□□□□□ -0.74
APP-213ENST00000464867 GSTCDQ8NEC7 633 aa10.4□□□□□ -0.74
APP-213ENST00000464867 RDM1Q8NG50 284 aa10.4□□□□□ -0.74
APP-213ENST00000464867 MDM1Q8TC05 714 aa10.4□□□□□ -0.74
APP-213ENST00000464867 EXOC4Q96A65 974 aa10.4□□□□□ -0.74
APP-213ENST00000464867 CPB2Q96IY4 423 aa10.4□□□□□ -0.74
APP-213ENST00000464867 RIT2Q99578 217 aa10.4□□□□□ -0.74
APP-213ENST00000464867 TEKT3Q9BXF9 490 aa10.4□□□□□ -0.74
APP-213ENST00000464867 NXF3Q9H4D5 531 aaKnown RBP10.4□□□□□ -0.74
APP-213ENST00000464867 MINDY3Q9H8M7 445 aa10.4□□□□□ -0.74
APP-213ENST00000464867 CYP4F11Q9HBI6 524 aa10.4□□□□□ -0.74
APP-213ENST00000464867 BACE2Q9Y5Z0 518 aa10.4□□□□□ -0.74
APP-213ENST00000464867 CELSR3Q9NYQ7 3312 aa10.4□□□□□ -0.74
APP-213ENST00000464867 KIF26AQ9ULI4 1882 aaPredicted RBP10.4□□□□□ -0.75
APP-213ENST00000464867 CFAP46Q8IYW2 2715 aa10.4□□□□□ -0.75
APP-213ENST00000464867 PIEZO2Q9H5I5 2752 aa10.39□□□□□ -0.75
APP-213ENST00000464867 TMEM150BA6NC51 233 aa10.39□□□□□ -0.75
APP-213ENST00000464867 E7EWF7 191 aa10.39□□□□□ -0.75
APP-213ENST00000464867 ATXN7O15265 892 aaPredicted RBP10.39□□□□□ -0.75
APP-213ENST00000464867 ARHGAP6O43182 974 aa10.39□□□□□ -0.75
APP-213ENST00000464867 CYP21A2P08686 494 aa10.39□□□□□ -0.75
APP-213ENST00000464867 RXRAP19793 462 aa10.39□□□□□ -0.75
APP-213ENST00000464867 FGFR3P22607 806 aa10.39□□□□□ -0.75
APP-213ENST00000464867 CCR2P41597 374 aa10.39□□□□□ -0.75
APP-213ENST00000464867 DPP6P42658 865 aa10.39□□□□□ -0.75
APP-213ENST00000464867 DGKEP52429 567 aa10.39□□□□□ -0.75
APP-213ENST00000464867 ITPRIPL2Q3MIP1 535 aa10.39□□□□□ -0.75
APP-213ENST00000464867 C20orf194Q5TEA3 1177 aa10.39□□□□□ -0.75
APP-213ENST00000464867 LRCH2Q5VUJ6 765 aa10.39□□□□□ -0.75
APP-213ENST00000464867 PKN3Q6P5Z2 889 aa10.39□□□□□ -0.75
APP-213ENST00000464867 CCNI2Q6ZMN8 369 aaPredicted RBP10.39□□□□□ -0.75
APP-213ENST00000464867 TMTC3Q6ZXV5 915 aa10.39□□□□□ -0.75
APP-213ENST00000464867 VWA5B2Q8N398 1253 aa10.39□□□□□ -0.75
APP-213ENST00000464867 FANCBQ8NB91 859 aa10.39□□□□□ -0.75
APP-213ENST00000464867 RNF149Q8NC42 400 aa10.39□□□□□ -0.75
APP-213ENST00000464867 LSM14AQ8ND56 463 aaKnown RBP10.39□□□□□ -0.75
APP-213ENST00000464867 TCP11Q8WWU5 503 aa10.39□□□□□ -0.75
APP-213ENST00000464867 CEP89Q96ST8 783 aa10.39□□□□□ -0.75
APP-213ENST00000464867 PAAF1Q9BRP4 392 aa10.39□□□□□ -0.75
APP-213ENST00000464867 THG1LQ9NWX6 298 aaKnown RBP10.39□□□□□ -0.75
APP-213ENST00000464867 CACNG4Q9UBN1 327 aa10.39□□□□□ -0.75
APP-213ENST00000464867 EBF1Q9UH73 591 aa10.39□□□□□ -0.75
APP-213ENST00000464867 SLC12A7Q9Y666 1083 aa10.39□□□□□ -0.75
APP-213ENST00000464867 INO80B-WBP1J3KQ70 363 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms