RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 H3BUI4 141 aa5.16□□□□□ -1.58
CLK1-208ENST00000464454 PRSS23O95084 383 aa5.16□□□□□ -1.58
CLK1-208ENST00000464454 GNAI2P04899 355 aa5.16□□□□□ -1.58
CLK1-208ENST00000464454 FCER1AP12319 257 aa5.16□□□□□ -1.58
CLK1-208ENST00000464454 CACNB3P54284 484 aa5.16□□□□□ -1.58
CLK1-208ENST00000464454 CXADRP78310 365 aa5.16□□□□□ -1.58
CLK1-208ENST00000464454 FAM193AP78312 1265 aa5.16□□□□□ -1.58
CLK1-208ENST00000464454 NKX6-1P78426 367 aaPredicted RBP5.16□□□□□ -1.58
CLK1-208ENST00000464454 BLOC1S1P78537 153 aa5.16□□□□□ -1.58
CLK1-208ENST00000464454 HSD11B2P80365 405 aa5.16□□□□□ -1.58
CLK1-208ENST00000464454 GPSM2P81274 684 aa5.16□□□□□ -1.58
CLK1-208ENST00000464454 SLFN5Q08AF3 891 aa5.16□□□□□ -1.58
CLK1-208ENST00000464454 RESTQ13127 1097 aa5.16□□□□□ -1.58
CLK1-208ENST00000464454 KIAA0753Q2KHM9 967 aa5.16□□□□□ -1.58
CLK1-208ENST00000464454 C11orf96Q7Z7L8 435 aa5.16□□□□□ -1.58
CLK1-208ENST00000464454 AMER2Q8N7J2 671 aa5.16□□□□□ -1.58
CLK1-208ENST00000464454 FAM156AQ8NDB6 213 aa5.16□□□□□ -1.58
CLK1-208ENST00000464454 DDX17Q92841 729 aaKnown RBP5.16□□□□□ -1.58
CLK1-208ENST00000464454 SLC35A4Q96G79 324 aa5.16□□□□□ -1.58
CLK1-208ENST00000464454 BOD1Q96IK1 185 aa5.16□□□□□ -1.58
CLK1-208ENST00000464454 PRRX2Q99811 253 aa5.16□□□□□ -1.58
CLK1-208ENST00000464454 B3GNT5Q9BYG0 378 aa5.16□□□□□ -1.58
CLK1-208ENST00000464454 ALOXE3Q9BYJ1 711 aa5.16□□□□□ -1.58
CLK1-208ENST00000464454 ZNF700Q9H0M5 742 aa5.16□□□□□ -1.58
CLK1-208ENST00000464454 GALNT9Q9HCQ5 603 aa5.16□□□□□ -1.58
CLK1-208ENST00000464454 SARS2Q9NP81 518 aaKnown RBP5.16□□□□□ -1.58
CLK1-208ENST00000464454 CNNM1Q9NRU3 951 aa5.16□□□□□ -1.58
CLK1-208ENST00000464454 DKK2Q9UBU2 259 aa5.16□□□□□ -1.58
CLK1-208ENST00000464454 USP25Q9UHP3 1055 aa5.16□□□□□ -1.58
CLK1-208ENST00000464454 CDYLQ9Y232 598 aa5.16□□□□□ -1.58
CLK1-208ENST00000464454 HS3ST4Q9Y661 456 aa5.16□□□□□ -1.58
CLK1-208ENST00000464454 MYADML2A6NDP7 307 aa5.15□□□□□ -1.59
CLK1-208ENST00000464454 TMEM191CA6NGB0 347 aa5.15□□□□□ -1.59
CLK1-208ENST00000464454 GJB1P08034 283 aa5.15□□□□□ -1.59
CLK1-208ENST00000464454 ELANEP08246 267 aa5.15□□□□□ -1.59
CLK1-208ENST00000464454 RARBP10826 455 aa5.15□□□□□ -1.59
CLK1-208ENST00000464454 ZFP36P26651 326 aaKnown RBP5.15□□□□□ -1.59
CLK1-208ENST00000464454 ACVRL1P37023 503 aa5.15□□□□□ -1.59
CLK1-208ENST00000464454 PICALMQ13492 652 aa5.15□□□□□ -1.59
CLK1-208ENST00000464454 FGL2Q14314 439 aa5.15□□□□□ -1.59
CLK1-208ENST00000464454 PLS1Q14651 629 aa5.15□□□□□ -1.59
CLK1-208ENST00000464454 KIF22Q14807 665 aa5.15□□□□□ -1.59
CLK1-208ENST00000464454 RNF220Q5VTB9 566 aa5.15□□□□□ -1.59
CLK1-208ENST00000464454 B3GNTL1Q67FW5 361 aaPredicted RBP5.15□□□□□ -1.59
CLK1-208ENST00000464454 COLGALT2Q8IYK4 626 aa5.15□□□□□ -1.59
CLK1-208ENST00000464454 NEU4Q8WWR8 484 aaPredicted RBP5.15□□□□□ -1.59
CLK1-208ENST00000464454 TNPO1Q92973 898 aaKnown RBP5.15□□□□□ -1.59
CLK1-208ENST00000464454 RNF31Q96EP0 1072 aa5.15□□□□□ -1.59
CLK1-208ENST00000464454 KLHL32Q96NJ5 620 aa5.15□□□□□ -1.59
CLK1-208ENST00000464454 IMPG2Q9BZV3 1241 aa5.15□□□□□ -1.59
CLK1-208ENST00000464454 MRPL46Q9H2W6 279 aaKnown RBP5.15□□□□□ -1.59
CLK1-208ENST00000464454 GPR35Q9HC97 309 aa5.15□□□□□ -1.59
CLK1-208ENST00000464454 SLAMF7Q9NQ25 335 aa5.15□□□□□ -1.59
CLK1-208ENST00000464454 TMEM74BQ9NUR3 256 aa5.15□□□□□ -1.59
CLK1-208ENST00000464454 FAM50BQ9Y247 325 aa5.15□□□□□ -1.59
CLK1-208ENST00000464454 AATKQ6ZMQ8 1374 aa5.15□□□□□ -1.59
CLK1-208ENST00000464454 CENPVL1A0A0U1RR11 272 aa5.14□□□□□ -1.59
CLK1-208ENST00000464454 CCDC195A0A1B0GUA6 201 aa5.14□□□□□ -1.59
CLK1-208ENST00000464454 ZNF785A8K8V0 405 aa5.14□□□□□ -1.59
CLK1-208ENST00000464454 GOLIM4O00461 696 aa5.14□□□□□ -1.59
CLK1-208ENST00000464454 APAF1O14727 1248 aa5.14□□□□□ -1.59
CLK1-208ENST00000464454 FSHBP01225 129 aa5.14□□□□□ -1.59
CLK1-208ENST00000464454 AVPR1BP47901 424 aa5.14□□□□□ -1.59
CLK1-208ENST00000464454 RHBDL3P58872 404 aa5.14□□□□□ -1.59
CLK1-208ENST00000464454 POU6F2P78424 691 aaPredicted RBP5.14□□□□□ -1.59
CLK1-208ENST00000464454 TAP1Q03518 808 aa5.14□□□□□ -1.59
CLK1-208ENST00000464454 CNN3Q15417 329 aaKnown RBP5.14□□□□□ -1.59
CLK1-208ENST00000464454 SYCP2LQ5T4T6 812 aa5.14□□□□□ -1.59
CLK1-208ENST00000464454 EMC10Q5UCC4 262 aa5.14□□□□□ -1.59
CLK1-208ENST00000464454 ABHD17BQ5VST6 288 aa5.14□□□□□ -1.59
CLK1-208ENST00000464454 IGFL4Q6B9Z1 124 aa5.14□□□□□ -1.59
CLK1-208ENST00000464454 MAEAQ7L5Y9 396 aa5.14□□□□□ -1.59
CLK1-208ENST00000464454 CLNKQ7Z7G1 428 aa5.14□□□□□ -1.59
CLK1-208ENST00000464454 SH2D3CQ8N5H7 860 aa5.14□□□□□ -1.59
CLK1-208ENST00000464454 SLC17A8Q8NDX2 589 aa5.14□□□□□ -1.59
CLK1-208ENST00000464454 TMIEQ8NEW7 156 aa5.14□□□□□ -1.59
CLK1-208ENST00000464454 SVIPQ8NHG7 77 aa5.14□□□□□ -1.59
CLK1-208ENST00000464454 SMOQ99835 787 aa5.14□□□□□ -1.59
CLK1-208ENST00000464454 CNPPD1Q9BV87 410 aa5.14□□□□□ -1.59
CLK1-208ENST00000464454 C1orf43Q9BWL3 253 aa5.14□□□□□ -1.59
CLK1-208ENST00000464454 TLR10Q9BXR5 811 aa5.14□□□□□ -1.59
CLK1-208ENST00000464454 TMPRSS5Q9H3S3 457 aa5.14□□□□□ -1.59
CLK1-208ENST00000464454 ARMT1Q9H993 441 aa5.14□□□□□ -1.59
CLK1-208ENST00000464454 HSFX1Q9UBD0 423 aa5.14□□□□□ -1.59
CLK1-208ENST00000464454 MAP3K2Q9Y2U5 619 aa5.14□□□□□ -1.59
CLK1-208ENST00000464454 LPXNO60711 386 aa5.13□□□□□ -1.59
CLK1-208ENST00000464454 PEX14O75381 377 aa5.13□□□□□ -1.59
CLK1-208ENST00000464454 SPDEFO95238 335 aa5.13□□□□□ -1.59
CLK1-208ENST00000464454 MATN4O95460 622 aa5.13□□□□□ -1.59
CLK1-208ENST00000464454 KCNA2P16389 499 aa5.13□□□□□ -1.59
CLK1-208ENST00000464454 PSMC1P62191 440 aaKnown RBP5.13□□□□□ -1.59
CLK1-208ENST00000464454 RAB1AP62820 205 aa5.13□□□□□ -1.59
CLK1-208ENST00000464454 OS9Q13438 667 aaPredicted RBP5.13□□□□□ -1.59
CLK1-208ENST00000464454 BIRC2Q13490 618 aa5.13□□□□□ -1.59
CLK1-208ENST00000464454 SEMA5AQ13591 1074 aa5.13□□□□□ -1.59
CLK1-208ENST00000464454 BRD3Q15059 726 aa5.13□□□□□ -1.59
CLK1-208ENST00000464454 CYP2A13Q16696 494 aa5.13□□□□□ -1.59
CLK1-208ENST00000464454 IL31Q6EBC2 164 aa5.13□□□□□ -1.59
CLK1-208ENST00000464454 PPP1R3BQ86XI6 285 aa5.13□□□□□ -1.59
CLK1-208ENST00000464454 ULK2Q8IYT8 1036 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms