RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 KLHL11Q9NVR0 708 aa5.17□□□□□ -1.58
USH2A-203ENST00000463147 DMTF1Q9Y222 760 aa5.17□□□□□ -1.58
USH2A-203ENST00000463147 MAP3K2Q9Y2U5 619 aa5.17□□□□□ -1.58
USH2A-203ENST00000463147 NUMBLQ9Y6R0 609 aa5.17□□□□□ -1.58
USH2A-203ENST00000463147 ARHGEF17Q96PE2 2063 aaPredicted RBP5.16□□□□□ -1.58
USH2A-203ENST00000463147 ZBED1O96006 694 aa5.16□□□□□ -1.58
USH2A-203ENST00000463147 HOXB6P17509 224 aaKnown RBP5.16□□□□□ -1.58
USH2A-203ENST00000463147 UBE3CQ15386 1083 aa5.16□□□□□ -1.58
USH2A-203ENST00000463147 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.16□□□□□ -1.58
USH2A-203ENST00000463147 MUM1Q2TAK8 710 aa5.16□□□□□ -1.58
USH2A-203ENST00000463147 GRAMD1BQ3KR37 738 aa5.16□□□□□ -1.58
USH2A-203ENST00000463147 USP45Q70EL2 814 aa5.16□□□□□ -1.58
USH2A-203ENST00000463147 ZNF366Q8N895 744 aa5.16□□□□□ -1.58
USH2A-203ENST00000463147 VPS37AQ8NEZ2 397 aa5.16□□□□□ -1.58
USH2A-203ENST00000463147 RIN2Q8WYP3 895 aaPredicted RBP5.16□□□□□ -1.58
USH2A-203ENST00000463147 MVB12AQ96EY5 273 aa5.16□□□□□ -1.58
USH2A-203ENST00000463147 BOD1Q96IK1 185 aa5.16□□□□□ -1.58
USH2A-203ENST00000463147 FDXACB1Q9BRP7 624 aaPredicted RBP5.16□□□□□ -1.58
USH2A-203ENST00000463147 ALOXE3Q9BYJ1 711 aa5.16□□□□□ -1.58
USH2A-203ENST00000463147 BHMT2Q9H2M3 363 aa5.16□□□□□ -1.58
USH2A-203ENST00000463147 TMEM74BQ9NUR3 256 aa5.16□□□□□ -1.58
USH2A-203ENST00000463147 LIMCH1Q9UPQ0 1083 aa5.16□□□□□ -1.58
USH2A-203ENST00000463147 PCDHGB6Q9Y5F9 930 aa5.16□□□□□ -1.58
USH2A-203ENST00000463147 ORC4O43929 436 aa5.15□□□□□ -1.59
USH2A-203ENST00000463147 FGAP02671 866 aa5.15□□□□□ -1.59
USH2A-203ENST00000463147 HRGP04196 525 aa5.15□□□□□ -1.59
USH2A-203ENST00000463147 ALDH2P05091 517 aa5.15□□□□□ -1.59
USH2A-203ENST00000463147 TRAPPC10P48553 1259 aa5.15□□□□□ -1.59
USH2A-203ENST00000463147 MRPS9P82933 396 aaKnown RBP5.15□□□□□ -1.59
USH2A-203ENST00000463147 SRSF4Q08170 494 aaKnown RBP5.15□□□□□ -1.59
USH2A-203ENST00000463147 METRNLQ641Q3 311 aa5.15□□□□□ -1.59
USH2A-203ENST00000463147 SWSAP1Q6NVH7 229 aa5.15□□□□□ -1.59
USH2A-203ENST00000463147 GPR149Q86SP6 731 aa5.15□□□□□ -1.59
USH2A-203ENST00000463147 SRLQ86TD4 932 aa5.15□□□□□ -1.59
USH2A-203ENST00000463147 MAPKAPK5Q8IW41 473 aa5.15□□□□□ -1.59
USH2A-203ENST00000463147 KIAA0319LQ8IZA0 1049 aa5.15□□□□□ -1.59
USH2A-203ENST00000463147 FAM9AQ8IZU1 332 aaPredicted RBP5.15□□□□□ -1.59
USH2A-203ENST00000463147 MIER2Q8N344 545 aa5.15□□□□□ -1.59
USH2A-203ENST00000463147 TMEM132CQ8N3T6 1108 aa5.15□□□□□ -1.59
USH2A-203ENST00000463147 PDLIM2Q96JY6 352 aa5.15□□□□□ -1.59
USH2A-203ENST00000463147 KCTD10Q9H3F6 313 aa5.15□□□□□ -1.59
USH2A-203ENST00000463147 DPP7Q9UHL4 492 aa5.15□□□□□ -1.59
USH2A-203ENST00000463147 KCNG1Q9UIX4 513 aa5.15□□□□□ -1.59
USH2A-203ENST00000463147 DRGXA6NNA5 263 aa5.14□□□□□ -1.59
USH2A-203ENST00000463147 PRAMEF4O60810 478 aa5.14□□□□□ -1.59
USH2A-203ENST00000463147 C1QL1O75973 258 aa5.14□□□□□ -1.59
USH2A-203ENST00000463147 UBXN7O94888 489 aa5.14□□□□□ -1.59
USH2A-203ENST00000463147 CRHR1P34998 444 aa5.14□□□□□ -1.59
USH2A-203ENST00000463147 FLT3LGP49771 235 aa5.14□□□□□ -1.59
USH2A-203ENST00000463147 LGALS4P56470 323 aa5.14□□□□□ -1.59
USH2A-203ENST00000463147 CCT2P78371 535 aaKnown RBP5.14□□□□□ -1.59
USH2A-203ENST00000463147 SCAPQ12770 1279 aa5.14□□□□□ -1.59
USH2A-203ENST00000463147 SEMA5AQ13591 1074 aa5.14□□□□□ -1.59
USH2A-203ENST00000463147 UAP1L1Q3KQV9 507 aa5.14□□□□□ -1.59
USH2A-203ENST00000463147 C3orf36Q3SXR2 165 aa5.14□□□□□ -1.59
USH2A-203ENST00000463147 ATXN7L2Q5T6C5 722 aaPredicted RBP5.14□□□□□ -1.59
USH2A-203ENST00000463147 ANKS6Q68DC2 871 aa5.14□□□□□ -1.59
USH2A-203ENST00000463147 SRGAP1Q7Z6B7 1085 aa5.14□□□□□ -1.59
USH2A-203ENST00000463147 OR56A1Q8NGH5 318 aa5.14□□□□□ -1.59
USH2A-203ENST00000463147 SNX33Q8WV41 574 aa5.14□□□□□ -1.59
USH2A-203ENST00000463147 SSH1Q8WYL5 1049 aa5.14□□□□□ -1.59
USH2A-203ENST00000463147 APOL5Q9BWW9 433 aa5.14□□□□□ -1.59
USH2A-203ENST00000463147 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.14□□□□□ -1.59
USH2A-203ENST00000463147 MAF1Q9H063 256 aa5.14□□□□□ -1.59
USH2A-203ENST00000463147 GALNT9Q9HCQ5 603 aa5.14□□□□□ -1.59
USH2A-203ENST00000463147 PLCB1Q9NQ66 1216 aa5.14□□□□□ -1.59
USH2A-203ENST00000463147 CASS4Q9NQ75 786 aa5.14□□□□□ -1.59
USH2A-203ENST00000463147 FOXJ2Q9P0K8 574 aa5.14□□□□□ -1.59
USH2A-203ENST00000463147 POLHQ9Y253 713 aa5.14□□□□□ -1.59
USH2A-203ENST00000463147 IPPQ9Y573 584 aa5.14□□□□□ -1.59
USH2A-203ENST00000463147 ZMYM3Q14202 1370 aa5.14□□□□□ -1.59
USH2A-203ENST00000463147 CCDC154A6NI56 674 aa5.13□□□□□ -1.59
USH2A-203ENST00000463147 H3BML4 177 aa5.13□□□□□ -1.59
USH2A-203ENST00000463147 HTRA2O43464 458 aaPredicted RBP5.13□□□□□ -1.59
USH2A-203ENST00000463147 PIP5K1CO60331 668 aa5.13□□□□□ -1.59
USH2A-203ENST00000463147 ITGA10O75578 1167 aa5.13□□□□□ -1.59
USH2A-203ENST00000463147 TCEA3O75764 348 aa5.13□□□□□ -1.59
USH2A-203ENST00000463147 SNRPA1P09661 255 aaKnown RBP5.13□□□□□ -1.59
USH2A-203ENST00000463147 TM4SF4P48230 202 aa5.13□□□□□ -1.59
USH2A-203ENST00000463147 CLRN1P58418 232 aa5.13□□□□□ -1.59
USH2A-203ENST00000463147 CDK17Q00537 523 aa5.13□□□□□ -1.59
USH2A-203ENST00000463147 LONRF1Q17RB8 773 aa5.13□□□□□ -1.59
USH2A-203ENST00000463147 GJC2Q5T442 439 aaPredicted RBP5.13□□□□□ -1.59
USH2A-203ENST00000463147 NPNTQ6UXI9 565 aa5.13□□□□□ -1.59
USH2A-203ENST00000463147 GRASPQ7Z6J2 395 aaPredicted RBP5.13□□□□□ -1.59
USH2A-203ENST00000463147 RNF169Q8NCN4 708 aa5.13□□□□□ -1.59
USH2A-203ENST00000463147 ACTRT2Q8TDY3 377 aa5.13□□□□□ -1.59
USH2A-203ENST00000463147 AUTS2Q8WXX7 1259 aa5.13□□□□□ -1.59
USH2A-203ENST00000463147 C1GALT1C1Q96EU7 318 aa5.13□□□□□ -1.59
USH2A-203ENST00000463147 TBCBQ99426 244 aa5.13□□□□□ -1.59
USH2A-203ENST00000463147 MAP3K14Q99558 947 aa5.13□□□□□ -1.59
USH2A-203ENST00000463147 B3GNT5Q9BYG0 378 aa5.13□□□□□ -1.59
USH2A-203ENST00000463147 TMEM60Q9H2L4 133 aa5.13□□□□□ -1.59
USH2A-203ENST00000463147 RNPEPQ9H4A4 650 aa5.13□□□□□ -1.59
USH2A-203ENST00000463147 IFT122Q9HBG6 1241 aa5.13□□□□□ -1.59
USH2A-203ENST00000463147 GPRC5DQ9NZD1 345 aa5.13□□□□□ -1.59
USH2A-203ENST00000463147 L1RE1Q9UN81 338 aa5.13□□□□□ -1.59
USH2A-203ENST00000463147 ABHD14A-ACY1A0A1B0GW23 586 aa5.12□□□□□ -1.59
USH2A-203ENST00000463147 LRRC3CA6NJW4 275 aa5.12□□□□□ -1.59
USH2A-203ENST00000463147 PQBP1O60828 265 aaKnown RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms