RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 BTG3Q14201 252 aaPredicted RBP15.37■□□□□ 0.05
COL6A1-202ENST00000463060 WDR59Q6PJI9 974 aa15.37■□□□□ 0.05
COL6A1-202ENST00000463060 CACNA2D4Q7Z3S7 1137 aa15.37■□□□□ 0.05
COL6A1-202ENST00000463060 IRF2BP2Q7Z5L9 587 aa15.37■□□□□ 0.05
COL6A1-202ENST00000463060 CNGA4Q8IV77 575 aa15.37■□□□□ 0.05
COL6A1-202ENST00000463060 TOP6BLQ8N6T0 577 aa15.37■□□□□ 0.05
COL6A1-202ENST00000463060 OR8K1Q8NGG5 319 aa15.37■□□□□ 0.05
COL6A1-202ENST00000463060 WHAMMQ8TF30 809 aa15.37■□□□□ 0.05
COL6A1-202ENST00000463060 BCL7CQ8WUZ0 217 aaPredicted RBP15.37■□□□□ 0.05
COL6A1-202ENST00000463060 KBTBD7Q8WVZ9 684 aa15.37■□□□□ 0.05
COL6A1-202ENST00000463060 CLP1Q92989 425 aaKnown RBP15.37■□□□□ 0.05
COL6A1-202ENST00000463060 SUSD3Q96L08 255 aa15.37■□□□□ 0.05
COL6A1-202ENST00000463060 PANX2Q96RD6 677 aa15.37■□□□□ 0.05
COL6A1-202ENST00000463060 NUCKS1Q9H1E3 243 aaKnown RBP15.37■□□□□ 0.05
COL6A1-202ENST00000463060 SMYD3Q9H7B4 428 aa15.37■□□□□ 0.05
COL6A1-202ENST00000463060 CISHQ9NSE2 258 aa15.37■□□□□ 0.05
COL6A1-202ENST00000463060 MARCH5Q9NX47 278 aa15.37■□□□□ 0.05
COL6A1-202ENST00000463060 L1RE1Q9UN81 338 aa15.37■□□□□ 0.05
COL6A1-202ENST00000463060 FAN1Q9Y2M0 1017 aa15.37■□□□□ 0.05
COL6A1-202ENST00000463060 SNX9Q9Y5X1 595 aa15.37■□□□□ 0.05
COL6A1-202ENST00000463060 GABRDO14764 452 aa15.36■□□□□ 0.05
COL6A1-202ENST00000463060 TACC1O75410 805 aa15.36■□□□□ 0.05
COL6A1-202ENST00000463060 CYP11A1P05108 521 aa15.36■□□□□ 0.05
COL6A1-202ENST00000463060 PNMA6AP0CW24 399 aaPredicted RBP15.36■□□□□ 0.05
COL6A1-202ENST00000463060 P4HA1P13674 534 aa15.36■□□□□ 0.05
COL6A1-202ENST00000463060 CLCN1P35523 988 aa15.36■□□□□ 0.05
COL6A1-202ENST00000463060 SOX5P35711 763 aa15.36■□□□□ 0.05
COL6A1-202ENST00000463060 BRCC3P46736 316 aa15.36■□□□□ 0.05
COL6A1-202ENST00000463060 ZNF132P52740 706 aa15.36■□□□□ 0.05
COL6A1-202ENST00000463060 GSDMDP57764 484 aa15.36■□□□□ 0.05
COL6A1-202ENST00000463060 INCA1Q0VD86 236 aa15.36■□□□□ 0.05
COL6A1-202ENST00000463060 RAPGEF1Q13905 1077 aa15.36■□□□□ 0.05
COL6A1-202ENST00000463060 MEA1Q16626 185 aa15.36■□□□□ 0.05
COL6A1-202ENST00000463060 ARHGAP44Q17R89 818 aa15.36■□□□□ 0.05
COL6A1-202ENST00000463060 TMEM173Q86WV6 379 aaPredicted RBP15.36■□□□□ 0.05
COL6A1-202ENST00000463060 ZNF397Q8NF99 534 aaPredicted RBP15.36■□□□□ 0.05
COL6A1-202ENST00000463060 YME1L1Q96TA2 773 aa15.36■□□□□ 0.05
COL6A1-202ENST00000463060 COLEC11Q9BWP8 271 aa15.36■□□□□ 0.05
COL6A1-202ENST00000463060 ABHD10Q9NUJ1 306 aa15.36■□□□□ 0.05
COL6A1-202ENST00000463060 NME7Q9Y5B8 376 aa15.36■□□□□ 0.05
COL6A1-202ENST00000463060 CYB561D2O14569 222 aa15.35■□□□□ 0.05
COL6A1-202ENST00000463060 TPM1P09493 284 aa15.35■□□□□ 0.05
COL6A1-202ENST00000463060 PRKCIP41743 596 aa15.35■□□□□ 0.05
COL6A1-202ENST00000463060 STAT1P42224 750 aa15.35■□□□□ 0.05
COL6A1-202ENST00000463060 TNNC1P63316 161 aa15.35■□□□□ 0.05
COL6A1-202ENST00000463060 HGSNATQ68CP4 663 aa15.35■□□□□ 0.05
COL6A1-202ENST00000463060 FAM109BQ6ICB4 259 aaPredicted RBP15.35■□□□□ 0.05
COL6A1-202ENST00000463060 KCNT2Q6UVM3 1135 aa15.35■□□□□ 0.05
COL6A1-202ENST00000463060 TMEM139Q8IV31 216 aa15.35■□□□□ 0.05
COL6A1-202ENST00000463060 RNF168Q8IYW5 571 aaPredicted RBP15.35■□□□□ 0.05
COL6A1-202ENST00000463060 SLC39A11Q8N1S5 342 aa15.35■□□□□ 0.05
COL6A1-202ENST00000463060 SPAG5Q96R06 1193 aa15.35■□□□□ 0.05
COL6A1-202ENST00000463060 MMS19Q96T76 1030 aa15.35■□□□□ 0.05
COL6A1-202ENST00000463060 MRPL45Q9BRJ2 306 aaKnown RBP15.35■□□□□ 0.05
COL6A1-202ENST00000463060 ZBED2Q9BTP6 218 aa15.35■□□□□ 0.05
COL6A1-202ENST00000463060 UBE2OQ9C0C9 1292 aaKnown RBP15.35■□□□□ 0.05
COL6A1-202ENST00000463060 PRO3102Q9H379 93 aa15.35■□□□□ 0.05
COL6A1-202ENST00000463060 ADAM28Q9UKQ2 775 aa15.35■□□□□ 0.05
COL6A1-202ENST00000463060 PRG3Q9Y2Y8 225 aaPredicted RBP15.35■□□□□ 0.05
COL6A1-202ENST00000463060 LCHNA4D1U4 455 aa15.34■□□□□ 0.05
COL6A1-202ENST00000463060 CARNS1A5YM72 827 aa15.34■□□□□ 0.05
COL6A1-202ENST00000463060 NT5C1B-RDH14C9J2C7 533 aa15.34■□□□□ 0.05
COL6A1-202ENST00000463060 I3L4J1 428 aa15.34■□□□□ 0.05
COL6A1-202ENST00000463060 HUS1O60921 280 aa15.34■□□□□ 0.05
COL6A1-202ENST00000463060 CILPO75339 1184 aa15.34■□□□□ 0.05
COL6A1-202ENST00000463060 WARSP23381 471 aaKnown RBP15.34■□□□□ 0.05
COL6A1-202ENST00000463060 PBX3P40426 434 aa15.34■□□□□ 0.05
COL6A1-202ENST00000463060 RAP1GAPP47736 663 aa15.34■□□□□ 0.05
COL6A1-202ENST00000463060 ALDH7A1P49419 539 aaKnown RBP15.34■□□□□ 0.05
COL6A1-202ENST00000463060 CDK17Q00537 523 aa15.34■□□□□ 0.05
COL6A1-202ENST00000463060 SFMBT2Q5VUG0 894 aa15.34■□□□□ 0.05
COL6A1-202ENST00000463060 WSCD1Q658N2 575 aa15.34■□□□□ 0.05
COL6A1-202ENST00000463060 SCARA5Q6ZMJ2 495 aa15.34■□□□□ 0.05
COL6A1-202ENST00000463060 LRRC8AQ8IWT6 810 aa15.34■□□□□ 0.05
COL6A1-202ENST00000463060 TMEM86AQ8N2M4 240 aa15.34■□□□□ 0.05
COL6A1-202ENST00000463060 PDCL2Q8N4E4 241 aa15.34■□□□□ 0.05
COL6A1-202ENST00000463060 TTC39CQ8N584 583 aa15.34■□□□□ 0.05
COL6A1-202ENST00000463060 COLGALT1Q8NBJ5 622 aa15.34■□□□□ 0.05
COL6A1-202ENST00000463060 APPL2Q8NEU8 664 aa15.34■□□□□ 0.05
COL6A1-202ENST00000463060 OLIG1Q8TAK6 271 aa15.34■□□□□ 0.05
COL6A1-202ENST00000463060 SPATA18Q8TC71 538 aa15.34■□□□□ 0.05
COL6A1-202ENST00000463060 HASPINQ8TF76 798 aa15.34■□□□□ 0.05
COL6A1-202ENST00000463060 IGSF21Q96ID5 467 aa15.34■□□□□ 0.05
COL6A1-202ENST00000463060 RNPC3Q96LT9 517 aaKnown RBP15.34■□□□□ 0.05
COL6A1-202ENST00000463060 SYT11Q9BT88 431 aa15.34■□□□□ 0.05
COL6A1-202ENST00000463060 VN1R3Q9BXE9 311 aa15.34■□□□□ 0.05
COL6A1-202ENST00000463060 GPR62Q9BZJ7 368 aa15.34■□□□□ 0.05
COL6A1-202ENST00000463060 BARX2Q9UMQ3 279 aaPredicted RBP15.34■□□□□ 0.05
COL6A1-202ENST00000463060 PCDHB8Q9UN66 801 aa15.34■□□□□ 0.05
COL6A1-202ENST00000463060 GOLGA6L6A8MZA4 724 aa15.33■□□□□ 0.04
COL6A1-202ENST00000463060 CYP26A1O43174 497 aa15.33■□□□□ 0.04
COL6A1-202ENST00000463060 TLL1O43897 1013 aa15.33■□□□□ 0.04
COL6A1-202ENST00000463060 TADA2AO75478 443 aa15.33■□□□□ 0.04
COL6A1-202ENST00000463060 GFPT2O94808 682 aa15.33■□□□□ 0.04
COL6A1-202ENST00000463060 FERP16591 822 aa15.33■□□□□ 0.04
COL6A1-202ENST00000463060 LAG3P18627 525 aa15.33■□□□□ 0.04
COL6A1-202ENST00000463060 TYMPP19971 482 aa15.33■□□□□ 0.04
COL6A1-202ENST00000463060 RAD23BP54727 409 aa15.33■□□□□ 0.04
COL6A1-202ENST00000463060 YWHAEP62258 255 aaKnown RBP15.33■□□□□ 0.04
COL6A1-202ENST00000463060 MRPL58Q14197 206 aaKnown RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms