RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 CWF19L1Q69YN2 538 aaKnown RBP7.88□□□□□ -1.15
PTPRF-210ENST00000463041 CENPPQ6IPU0 288 aa7.88□□□□□ -1.15
PTPRF-210ENST00000463041 CNNM4Q6P4Q7 775 aa7.88□□□□□ -1.15
PTPRF-210ENST00000463041 STXBP4Q6ZWJ1 553 aa7.88□□□□□ -1.15
PTPRF-210ENST00000463041 PDZD4Q76G19 769 aaPredicted RBP7.88□□□□□ -1.15
PTPRF-210ENST00000463041 METTL23Q86XA0 190 aa7.88□□□□□ -1.15
PTPRF-210ENST00000463041 THEM5Q8N1Q8 247 aa7.88□□□□□ -1.15
PTPRF-210ENST00000463041 PDILTQ8N807 584 aa7.88□□□□□ -1.15
PTPRF-210ENST00000463041 KCNG4Q8TDN1 519 aa7.88□□□□□ -1.15
PTPRF-210ENST00000463041 GPR152Q8TDT2 470 aa7.88□□□□□ -1.15
PTPRF-210ENST00000463041 ELSPBP1Q96BH3 223 aa7.88□□□□□ -1.15
PTPRF-210ENST00000463041 MCRS1Q96EZ8 462 aa7.88□□□□□ -1.15
PTPRF-210ENST00000463041 FAM213AQ9BRX8 229 aa7.88□□□□□ -1.15
PTPRF-210ENST00000463041 HSFX1Q9UBD0 423 aa7.88□□□□□ -1.15
PTPRF-210ENST00000463041 CFAP45Q9UL16 551 aa7.88□□□□□ -1.15
PTPRF-210ENST00000463041 CA14Q9ULX7 337 aa7.88□□□□□ -1.15
PTPRF-210ENST00000463041 SIT1Q9Y3P8 196 aa7.88□□□□□ -1.15
PTPRF-210ENST00000463041 ASB3Q9Y575 518 aa7.88□□□□□ -1.15
PTPRF-210ENST00000463041 ZNF638Q14966 1978 aaKnown RBP7.88□□□□□ -1.15
PTPRF-210ENST00000463041 KPNA7A9QM74 516 aa7.87□□□□□ -1.15
PTPRF-210ENST00000463041 PROB1E7EW31 1015 aa7.87□□□□□ -1.15
PTPRF-210ENST00000463041 PPEF2O14830 753 aa7.87□□□□□ -1.15
PTPRF-210ENST00000463041 SPTLC1O15269 473 aa7.87□□□□□ -1.15
PTPRF-210ENST00000463041 EXTL3O43909 919 aa7.87□□□□□ -1.15
PTPRF-210ENST00000463041 PNPLA4P41247 253 aa7.87□□□□□ -1.15
PTPRF-210ENST00000463041 TUFMP49411 452 aaKnown RBP7.87□□□□□ -1.15
PTPRF-210ENST00000463041 CASP5P51878 434 aa7.87□□□□□ -1.15
PTPRF-210ENST00000463041 EPHB3P54753 998 aa7.87□□□□□ -1.15
PTPRF-210ENST00000463041 EPHA5P54756 1037 aa7.87□□□□□ -1.15
PTPRF-210ENST00000463041 PRKCQQ04759 706 aa7.87□□□□□ -1.15
PTPRF-210ENST00000463041 SURF1Q15526 300 aa7.87□□□□□ -1.15
PTPRF-210ENST00000463041 E2F4Q16254 413 aa7.87□□□□□ -1.15
PTPRF-210ENST00000463041 SLC5A9Q2M3M2 681 aa7.87□□□□□ -1.15
PTPRF-210ENST00000463041 SLC44A4Q53GD3 710 aa7.87□□□□□ -1.15
PTPRF-210ENST00000463041 TANGO2Q6ICL3 276 aa7.87□□□□□ -1.15
PTPRF-210ENST00000463041 CCDC105Q8IYK2 499 aa7.87□□□□□ -1.15
PTPRF-210ENST00000463041 TMEM130Q8N3G9 435 aa7.87□□□□□ -1.15
PTPRF-210ENST00000463041 DTWD2Q8NBA8 298 aa7.87□□□□□ -1.15
PTPRF-210ENST00000463041 ZNF507Q8TCN5 953 aa7.87□□□□□ -1.15
PTPRF-210ENST00000463041 E2F7Q96AV8 911 aa7.87□□□□□ -1.15
PTPRF-210ENST00000463041 BORCS6Q96GS4 357 aa7.87□□□□□ -1.15
PTPRF-210ENST00000463041 NELL2Q99435 816 aa7.87□□□□□ -1.15
PTPRF-210ENST00000463041 C7orf25Q9BPX7 421 aa7.87□□□□□ -1.15
PTPRF-210ENST00000463041 PYM1Q9BRP8 204 aaKnown RBP7.87□□□□□ -1.15
PTPRF-210ENST00000463041 OSBPL6Q9BZF3 934 aa7.87□□□□□ -1.15
PTPRF-210ENST00000463041 TRIM9Q9C026 710 aa7.87□□□□□ -1.15
PTPRF-210ENST00000463041 IKZF4Q9H2S9 585 aa7.87□□□□□ -1.15
PTPRF-210ENST00000463041 TBC1D17Q9HA65 648 aa7.87□□□□□ -1.15
PTPRF-210ENST00000463041 MAGEF1Q9HAY2 307 aa7.87□□□□□ -1.15
PTPRF-210ENST00000463041 KIAA1586Q9HCI6 787 aa7.87□□□□□ -1.15
PTPRF-210ENST00000463041 ZFP14Q9HCL3 533 aa7.87□□□□□ -1.15
PTPRF-210ENST00000463041 ASAH2Q9NR71 780 aa7.87□□□□□ -1.15
PTPRF-210ENST00000463041 ARHGEF3Q9NR81 526 aa7.87□□□□□ -1.15
PTPRF-210ENST00000463041 FAM13BQ9NYF5 915 aa7.87□□□□□ -1.15
PTPRF-210ENST00000463041 CEP72Q9P209 647 aa7.87□□□□□ -1.15
PTPRF-210ENST00000463041 RCOR1Q9UKL0 485 aa7.87□□□□□ -1.15
PTPRF-210ENST00000463041 MIA3Q5JRA6 1907 aa7.87□□□□□ -1.15
PTPRF-210ENST00000463041 DENND4CQ5VZ89 1909 aa7.86□□□□□ -1.15
PTPRF-210ENST00000463041 ZNF233A6NK53 670 aa7.86□□□□□ -1.15
PTPRF-210ENST00000463041 EIF3DO15371 548 aaKnown RBP eCLIP7.86□□□□□ -1.15
PTPRF-210ENST00000463041 POLR2DO15514 142 aaKnown RBP7.86□□□□□ -1.15
PTPRF-210ENST00000463041 MOSPD3O75425 235 aa7.86□□□□□ -1.15
PTPRF-210ENST00000463041 PRPF6O94906 941 aaKnown RBP7.86□□□□□ -1.15
PTPRF-210ENST00000463041 VNN2O95498 520 aa7.86□□□□□ -1.15
PTPRF-210ENST00000463041 FGF19O95750 216 aa7.86□□□□□ -1.15
PTPRF-210ENST00000463041 F13A1P00488 732 aa7.86□□□□□ -1.15
PTPRF-210ENST00000463041 OR4Q2P0C623 313 aa7.86□□□□□ -1.15
PTPRF-210ENST00000463041 MYL4P12829 197 aa7.86□□□□□ -1.15
PTPRF-210ENST00000463041 CEBPBP17676 345 aa7.86□□□□□ -1.15
PTPRF-210ENST00000463041 CCR2P41597 374 aa7.86□□□□□ -1.15
PTPRF-210ENST00000463041 SNRPFP62306 86 aaKnown RBP7.86□□□□□ -1.15
PTPRF-210ENST00000463041 RBP5P82980 135 aa7.86□□□□□ -1.15
PTPRF-210ENST00000463041 TFAMQ00059 246 aaKnown RBP7.86□□□□□ -1.15
PTPRF-210ENST00000463041 SV2CQ496J9 727 aa7.86□□□□□ -1.15
PTPRF-210ENST00000463041 FOXD4L5Q5VV16 416 aaPredicted RBP7.86□□□□□ -1.15
PTPRF-210ENST00000463041 POTEHQ6S545 545 aa7.86□□□□□ -1.15
PTPRF-210ENST00000463041 SHC4Q6S5L8 630 aa7.86□□□□□ -1.15
PTPRF-210ENST00000463041 DNAJB7Q7Z6W7 309 aaPredicted RBP7.86□□□□□ -1.15
PTPRF-210ENST00000463041 ITIH5Q86UX2 942 aa7.86□□□□□ -1.15
PTPRF-210ENST00000463041 BRSK2Q8IWQ3 736 aa7.86□□□□□ -1.15
PTPRF-210ENST00000463041 EFCAB13Q8IY85 973 aa7.86□□□□□ -1.15
PTPRF-210ENST00000463041 DCP1BQ8IZD4 617 aaKnown RBP7.86□□□□□ -1.15
PTPRF-210ENST00000463041 HS6ST3Q8IZP7 471 aa7.86□□□□□ -1.15
PTPRF-210ENST00000463041 GPD1LQ8N335 351 aa7.86□□□□□ -1.15
PTPRF-210ENST00000463041 CSGALNACT2Q8N6G5 542 aa7.86□□□□□ -1.15
PTPRF-210ENST00000463041 ATAD1Q8NBU5 361 aa7.86□□□□□ -1.15
PTPRF-210ENST00000463041 ST13P5Q8NFI4 369 aaPredicted RBP7.86□□□□□ -1.15
PTPRF-210ENST00000463041 C2orf15Q8WU43 125 aaKnown RBP7.86□□□□□ -1.15
PTPRF-210ENST00000463041 FOXD4L4Q8WXT5 416 aaPredicted RBP7.86□□□□□ -1.15
PTPRF-210ENST00000463041 ING5Q8WYH8 240 aa7.86□□□□□ -1.15
PTPRF-210ENST00000463041 SMARCD2Q92925 531 aa7.86□□□□□ -1.15
PTPRF-210ENST00000463041 DHX58Q96C10 678 aa7.86□□□□□ -1.15
PTPRF-210ENST00000463041 TCEAL4Q96EI5 215 aa7.86□□□□□ -1.15
PTPRF-210ENST00000463041 ZNF560Q96MR9 790 aa7.86□□□□□ -1.15
PTPRF-210ENST00000463041 ASB16Q96NS5 453 aa7.86□□□□□ -1.15
PTPRF-210ENST00000463041 PGLYRP2Q96PD5 576 aa7.86□□□□□ -1.15
PTPRF-210ENST00000463041 PHOX2BQ99453 314 aa7.86□□□□□ -1.15
PTPRF-210ENST00000463041 KXD1Q9BQD3 176 aa7.86□□□□□ -1.15
PTPRF-210ENST00000463041 DDX23Q9BUQ8 820 aaKnown RBP7.86□□□□□ -1.15
PTPRF-210ENST00000463041 PLA2G2FQ9BZM2 168 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms