RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-223ENST00000463004 KRT14P02533 472 aa12.4□□□□□ -0.42
RBM39-223ENST00000463004 ADCYAP1R1P41586 468 aa12.4□□□□□ -0.42
RBM39-223ENST00000463004 PTENP60484 403 aa12.4□□□□□ -0.42
RBM39-223ENST00000463004 GNGT1P63211 74 aa12.4□□□□□ -0.42
RBM39-223ENST00000463004 PDE1BQ01064 536 aa12.4□□□□□ -0.42
RBM39-223ENST00000463004 DEFB115Q30KQ5 88 aa12.4□□□□□ -0.42
RBM39-223ENST00000463004 FAM43BQ6ZT52 329 aaPredicted RBP12.4□□□□□ -0.42
RBM39-223ENST00000463004 CACNA2D3Q8IZS8 1091 aa12.4□□□□□ -0.42
RBM39-223ENST00000463004 CPA5Q8WXQ8 436 aa12.4□□□□□ -0.42
RBM39-223ENST00000463004 GDAP1L1Q96MZ0 367 aa12.4□□□□□ -0.42
RBM39-223ENST00000463004 SETD4Q9NVD3 440 aa12.4□□□□□ -0.42
RBM39-223ENST00000463004 SENP1Q9P0U3 644 aa12.4□□□□□ -0.42
RBM39-223ENST00000463004 KLHL8Q9P2G9 620 aaPredicted RBP12.4□□□□□ -0.42
RBM39-223ENST00000463004 MROH7Q68CQ1 1323 aa12.4□□□□□ -0.42
RBM39-223ENST00000463004 CNTNAP1P78357 1384 aa12.4□□□□□ -0.42
RBM39-223ENST00000463004 BTNL10A8MVZ5 291 aa12.4□□□□□ -0.42
RBM39-223ENST00000463004 SPAG6O75602 509 aa12.4□□□□□ -0.42
RBM39-223ENST00000463004 ZNF135P52742 658 aaPredicted RBP12.4□□□□□ -0.42
RBM39-223ENST00000463004 SP3Q02447 781 aa12.4□□□□□ -0.42
RBM39-223ENST00000463004 CLEC16AQ2KHT3 1053 aa12.4□□□□□ -0.42
RBM39-223ENST00000463004 MAP7D1Q3KQU3 841 aa12.4□□□□□ -0.42
RBM39-223ENST00000463004 FBXO47Q5MNV8 452 aa12.4□□□□□ -0.42
RBM39-223ENST00000463004 CCDC62Q6P9F0 684 aa12.4□□□□□ -0.42
RBM39-223ENST00000463004 PHLDB2Q86SQ0 1253 aa12.4□□□□□ -0.42
RBM39-223ENST00000463004 UNC93AQ86WB7 457 aa12.4□□□□□ -0.42
RBM39-223ENST00000463004 C1orf131Q8NDD1 294 aaKnown RBP12.4□□□□□ -0.42
RBM39-223ENST00000463004 TMEM176AQ96HP8 235 aa12.4□□□□□ -0.42
RBM39-223ENST00000463004 TRAIPQ9BWF2 469 aa12.4□□□□□ -0.42
RBM39-223ENST00000463004 DHX35Q9H5Z1 703 aaKnown RBP12.4□□□□□ -0.42
RBM39-223ENST00000463004 SNX24Q9Y343 169 aa12.4□□□□□ -0.42
RBM39-223ENST00000463004 C2CD2Q9Y426 696 aa12.4□□□□□ -0.42
RBM39-223ENST00000463004 ASTN1O14525 1302 aa12.4□□□□□ -0.42
RBM39-223ENST00000463004 NCK2O43639 380 aa12.4□□□□□ -0.43
RBM39-223ENST00000463004 KRT38O76015 456 aa12.4□□□□□ -0.43
RBM39-223ENST00000463004 TOMM70O94826 608 aa12.4□□□□□ -0.43
RBM39-223ENST00000463004 MT-ND3P03897 115 aa12.4□□□□□ -0.43
RBM39-223ENST00000463004 COMTP21964 271 aa12.4□□□□□ -0.43
RBM39-223ENST00000463004 BMP6P22004 513 aa12.4□□□□□ -0.43
RBM39-223ENST00000463004 PTPN11Q06124 597 aaPredicted RBP12.4□□□□□ -0.43
RBM39-223ENST00000463004 POU5F1BQ06416 359 aa12.4□□□□□ -0.43
RBM39-223ENST00000463004 PDK2Q15119 407 aa12.4□□□□□ -0.43
RBM39-223ENST00000463004 P3H1Q32P28 736 aa12.4□□□□□ -0.43
RBM39-223ENST00000463004 ANKRD20A3Q5VUR7 823 aa12.4□□□□□ -0.43
RBM39-223ENST00000463004 TRMT10CQ7L0Y3 403 aaKnown RBP12.4□□□□□ -0.43
RBM39-223ENST00000463004 SRRM1Q8IYB3 904 aaKnown RBP12.4□□□□□ -0.43
RBM39-223ENST00000463004 ZSWIM1Q9BR11 485 aa12.4□□□□□ -0.43
RBM39-223ENST00000463004 MRPL9Q9BYD2 267 aaKnown RBP12.4□□□□□ -0.43
RBM39-223ENST00000463004 OSBPL8Q9BZF1 889 aa12.4□□□□□ -0.43
RBM39-223ENST00000463004 CISHQ9NSE2 258 aa12.4□□□□□ -0.43
RBM39-223ENST00000463004 A0A087WUV0 522 aaPredicted RBP12.39□□□□□ -0.43
RBM39-223ENST00000463004 TMEM88BA6NKF7 163 aa12.39□□□□□ -0.43
RBM39-223ENST00000463004 VTNP04004 478 aa12.39□□□□□ -0.43
RBM39-223ENST00000463004 PNMA6AP0CW24 399 aaPredicted RBP12.39□□□□□ -0.43
RBM39-223ENST00000463004 TAL1P17542 331 aaPredicted RBP12.39□□□□□ -0.43
RBM39-223ENST00000463004 THOC5Q13769 683 aaKnown RBP12.39□□□□□ -0.43
RBM39-223ENST00000463004 GOLGA7BQ2TAP0 167 aa12.39□□□□□ -0.43
RBM39-223ENST00000463004 BBS9Q3SYG4 887 aa12.39□□□□□ -0.43
RBM39-223ENST00000463004 KIAA1755Q5JYT7 1200 aa12.39□□□□□ -0.43
RBM39-223ENST00000463004 TMEM86AQ8N2M4 240 aa12.39□□□□□ -0.43
RBM39-223ENST00000463004 ATP11CQ8NB49 1132 aa12.39□□□□□ -0.43
RBM39-223ENST00000463004 CLMNQ96JQ2 1002 aa12.39□□□□□ -0.43
RBM39-223ENST00000463004 BTBD19C9JJ37 291 aa12.39□□□□□ -0.43
RBM39-223ENST00000463004 WEE2P0C1S8 567 aa12.39□□□□□ -0.43
RBM39-223ENST00000463004 ZNF268Q14587 947 aaPredicted RBP12.39□□□□□ -0.43
RBM39-223ENST00000463004 STKLD1Q8NE28 680 aa12.39□□□□□ -0.43
RBM39-223ENST00000463004 ACTRT1Q8TDG2 376 aa12.39□□□□□ -0.43
RBM39-223ENST00000463004 LRRC8CQ8TDW0 803 aa12.39□□□□□ -0.43
RBM39-223ENST00000463004 HNRNPLLQ8WVV9 542 aaKnown RBP12.39□□□□□ -0.43
RBM39-223ENST00000463004 UROC1Q96N76 676 aa12.39□□□□□ -0.43
RBM39-223ENST00000463004 DDX47Q9H0S4 455 aaKnown RBP12.39□□□□□ -0.43
RBM39-223ENST00000463004 PCSK1NQ9UHG2 260 aa12.39□□□□□ -0.43
RBM39-223ENST00000463004 BCAP29Q9UHQ4 241 aa12.39□□□□□ -0.43
RBM39-223ENST00000463004 SCN7AQ01118 1682 aa12.39□□□□□ -0.43
RBM39-223ENST00000463004 SMIM35A0A1B0GVV1 85 aa12.39□□□□□ -0.43
RBM39-223ENST00000463004 FRMD3A2A2Y4 597 aa12.39□□□□□ -0.43
RBM39-223ENST00000463004 ATP9AO75110 1047 aa12.39□□□□□ -0.43
RBM39-223ENST00000463004 TMEM62Q0P6H9 643 aa12.39□□□□□ -0.43
RBM39-223ENST00000463004 ANO4Q32M45 955 aa12.39□□□□□ -0.43
RBM39-223ENST00000463004 LRIG3Q6UXM1 1119 aa12.39□□□□□ -0.43
RBM39-223ENST00000463004 MRRFQ96E11 262 aaKnown RBP12.39□□□□□ -0.43
RBM39-223ENST00000463004 L3MBTL3Q96JM7 780 aaPredicted RBP12.39□□□□□ -0.43
RBM39-223ENST00000463004 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.39□□□□□ -0.43
RBM39-223ENST00000463004 BFARQ9NZS9 450 aa12.39□□□□□ -0.43
RBM39-223ENST00000463004 MAFBQ9Y5Q3 323 aaPredicted RBP12.39□□□□□ -0.43
RBM39-223ENST00000463004 PHF20L1A8MW92 1017 aa12.38□□□□□ -0.43
RBM39-223ENST00000463004 EGFRP00533 1210 aa12.38□□□□□ -0.43
RBM39-223ENST00000463004 ZNF286BP0CG31 522 aa12.38□□□□□ -0.43
RBM39-223ENST00000463004 EIF4BP23588 611 aaKnown RBP12.38□□□□□ -0.43
RBM39-223ENST00000463004 MAP3K10Q02779 954 aa12.38□□□□□ -0.43
RBM39-223ENST00000463004 RWDD4Q6NW29 188 aaKnown RBP12.38□□□□□ -0.43
RBM39-223ENST00000463004 CEP57Q86XR8 500 aa12.38□□□□□ -0.43
RBM39-223ENST00000463004 SLC30A5Q8TAD4 765 aa12.38□□□□□ -0.43
RBM39-223ENST00000463004 GPR20Q99678 358 aa12.38□□□□□ -0.43
RBM39-223ENST00000463004 CHST12Q9NRB3 414 aa12.38□□□□□ -0.43
RBM39-223ENST00000463004 IRS2Q9Y4H2 1338 aa12.38□□□□□ -0.43
RBM39-223ENST00000463004 XPAP23025 273 aaPredicted RBP12.38□□□□□ -0.43
RBM39-223ENST00000463004 GRIK1P39086 918 aa12.38□□□□□ -0.43
RBM39-223ENST00000463004 SULT1E1P49888 294 aa12.38□□□□□ -0.43
RBM39-223ENST00000463004 PMS2P54278 862 aa12.38□□□□□ -0.43
RBM39-223ENST00000463004 STAT4Q14765 748 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms