RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 SLC18A1P54219 525 aa19.5■□□□□ 0.71
HPS3-204ENST00000462030 SATB1Q01826 763 aa19.5■□□□□ 0.71
HPS3-204ENST00000462030 NFX1Q12986 1120 aaKnown RBP19.5■□□□□ 0.71
HPS3-204ENST00000462030 HHATQ5VTY9 493 aa19.5■□□□□ 0.71
HPS3-204ENST00000462030 NLRP9Q7RTR0 991 aa19.5■□□□□ 0.71
HPS3-204ENST00000462030 ENDOVQ8N8Q3 282 aaKnown RBP19.5■□□□□ 0.71
HPS3-204ENST00000462030 ZNF483Q8TF39 744 aaPredicted RBP19.5■□□□□ 0.71
HPS3-204ENST00000462030 TTC25Q96NG3 672 aa19.5■□□□□ 0.71
HPS3-204ENST00000462030 FAM213AQ9BRX8 229 aa19.5■□□□□ 0.71
HPS3-204ENST00000462030 NPHS2Q9NP85 383 aa19.5■□□□□ 0.71
HPS3-204ENST00000462030 KMT5AQ9NQR1 393 aa19.5■□□□□ 0.71
HPS3-204ENST00000462030 ATF7P17544 494 aaPredicted RBP19.49■□□□□ 0.71
HPS3-204ENST00000462030 DMP1Q13316 513 aaPredicted RBP19.49■□□□□ 0.71
HPS3-204ENST00000462030 MTMR1Q13613 665 aa19.49■□□□□ 0.71
HPS3-204ENST00000462030 PLEKHG4Q58EX7 1191 aa19.49■□□□□ 0.71
HPS3-204ENST00000462030 ZNF677Q86XU0 584 aa19.49■□□□□ 0.71
HPS3-204ENST00000462030 ASAP3Q8TDY4 903 aa19.49■□□□□ 0.71
HPS3-204ENST00000462030 ZNF75CPQ92670 426 aaPredicted RBP19.49■□□□□ 0.71
HPS3-204ENST00000462030 GLIS2Q9BZE0 524 aaPredicted RBP19.49■□□□□ 0.71
HPS3-204ENST00000462030 ZFP69BQ9UJL9 534 aa19.49■□□□□ 0.71
HPS3-204ENST00000462030 CCPG1Q9ULG6 757 aa19.49■□□□□ 0.71
HPS3-204ENST00000462030 EME2A4GXA9 379 aaPredicted RBP19.49■□□□□ 0.71
HPS3-204ENST00000462030 TCP10L2B9ZVM9 353 aa19.49■□□□□ 0.71
HPS3-204ENST00000462030 TLR3O15455 904 aaKnown RBP19.49■□□□□ 0.71
HPS3-204ENST00000462030 PTDSS1P48651 473 aaKnown RBP19.49■□□□□ 0.71
HPS3-204ENST00000462030 NOMO3P69849 1222 aa19.49■□□□□ 0.71
HPS3-204ENST00000462030 MAPK6Q16659 721 aa19.49■□□□□ 0.71
HPS3-204ENST00000462030 CCDC142Q17RM4 750 aa19.49■□□□□ 0.71
HPS3-204ENST00000462030 ZFYVE27Q5T4F4 411 aa19.49■□□□□ 0.71
HPS3-204ENST00000462030 LIN9Q5TKA1 542 aa19.49■□□□□ 0.71
HPS3-204ENST00000462030 CEP128Q6ZU80 1094 aa19.49■□□□□ 0.71
HPS3-204ENST00000462030 C4orf19Q8IY42 314 aa19.49■□□□□ 0.71
HPS3-204ENST00000462030 GPD1LQ8N335 351 aa19.49■□□□□ 0.71
HPS3-204ENST00000462030 LARGE2Q8N3Y3 721 aa19.49■□□□□ 0.71
HPS3-204ENST00000462030 HAUS1Q96CS2 278 aa19.49■□□□□ 0.71
HPS3-204ENST00000462030 TIPINQ9BVW5 301 aa19.49■□□□□ 0.71
HPS3-204ENST00000462030 UBIAD1Q9Y5Z9 338 aa19.49■□□□□ 0.71
HPS3-204ENST00000462030 ENO4A6NNW6 628 aa19.48■□□□□ 0.71
HPS3-204ENST00000462030 E7ENQ6 273 aa19.48■□□□□ 0.71
HPS3-204ENST00000462030 PIAS1O75925 651 aa19.48■□□□□ 0.71
HPS3-204ENST00000462030 PDHA1P08559 390 aa19.48■□□□□ 0.71
HPS3-204ENST00000462030 PCK1P35558 622 aa19.48■□□□□ 0.71
HPS3-204ENST00000462030 NOP14P78316 857 aaKnown RBP19.48■□□□□ 0.71
HPS3-204ENST00000462030 EFTUD2Q15029 972 aaKnown RBP eCLIP19.48■□□□□ 0.71
HPS3-204ENST00000462030 MFSD7Q6UXD7 560 aa19.48■□□□□ 0.71
HPS3-204ENST00000462030 MTDHQ86UE4 582 aaKnown RBP19.48■□□□□ 0.71
HPS3-204ENST00000462030 ANKMY2Q8IV38 441 aa19.48■□□□□ 0.71
HPS3-204ENST00000462030 ALLCQ8N6M5 410 aa19.48■□□□□ 0.71
HPS3-204ENST00000462030 MIPEPQ99797 713 aa19.48■□□□□ 0.71
HPS3-204ENST00000462030 TMX4Q9H1E5 349 aaPredicted RBP19.48■□□□□ 0.71
HPS3-204ENST00000462030 SENP1Q9P0U3 644 aa19.48■□□□□ 0.71
HPS3-204ENST00000462030 WDR91A4D1P6 747 aa19.48■□□□□ 0.71
HPS3-204ENST00000462030 ATP9AO75110 1047 aa19.48■□□□□ 0.71
HPS3-204ENST00000462030 ATP6V1C1P21283 382 aa19.48■□□□□ 0.71
HPS3-204ENST00000462030 ALDH1B1P30837 517 aa19.48■□□□□ 0.71
HPS3-204ENST00000462030 WNT7BP56706 349 aa19.48■□□□□ 0.71
HPS3-204ENST00000462030 FKBP1AP62942 108 aaKnown RBP19.48■□□□□ 0.71
HPS3-204ENST00000462030 EAPPQ56P03 285 aaPredicted RBP19.48■□□□□ 0.71
HPS3-204ENST00000462030 WASHC2DQ5SRD0 308 aa19.48■□□□□ 0.71
HPS3-204ENST00000462030 RFWD3Q6PCD5 774 aa19.48■□□□□ 0.71
HPS3-204ENST00000462030 C15orf39Q6ZRI6 1047 aa19.48■□□□□ 0.71
HPS3-204ENST00000462030 TEX9Q8N6V9 391 aa19.48■□□□□ 0.71
HPS3-204ENST00000462030 SLITRK1Q96PX8 696 aa19.48■□□□□ 0.71
HPS3-204ENST00000462030 C12orf65Q9H3J6 166 aaKnown RBP19.48■□□□□ 0.71
HPS3-204ENST00000462030 RGPD3A6NKT7 1758 aaPredicted RBP19.48■□□□□ 0.71
HPS3-204ENST00000462030 RGPD4Q7Z3J3 1758 aa19.48■□□□□ 0.71
HPS3-204ENST00000462030 LTBP4Q8N2S1 1624 aa19.47■□□□□ 0.71
HPS3-204ENST00000462030 DPPA5A6NC42 116 aa19.47■□□□□ 0.71
HPS3-204ENST00000462030 GOLGA8SH3BPF8 625 aa19.47■□□□□ 0.71
HPS3-204ENST00000462030 GOLGA8MH3BSY2 632 aa19.47■□□□□ 0.71
HPS3-204ENST00000462030 TRAFD1O14545 582 aaPredicted RBP19.47■□□□□ 0.71
HPS3-204ENST00000462030 HNRNPDLO14979 420 aaKnown RBP19.47■□□□□ 0.71
HPS3-204ENST00000462030 ZC3H11AO75152 810 aaKnown RBP eCLIP19.47■□□□□ 0.71
HPS3-204ENST00000462030 CCNE2O96020 404 aa19.47■□□□□ 0.71
HPS3-204ENST00000462030 KRT4P19013 534 aa19.47■□□□□ 0.71
HPS3-204ENST00000462030 ADRA1DP25100 572 aa19.47■□□□□ 0.71
HPS3-204ENST00000462030 PTPN4P29074 926 aa19.47■□□□□ 0.71
HPS3-204ENST00000462030 TUBP50607 506 aa19.47■□□□□ 0.71
HPS3-204ENST00000462030 RPL7AP62424 266 aaKnown RBP19.47■□□□□ 0.71
HPS3-204ENST00000462030 LMNB2Q03252 620 aa19.47■□□□□ 0.71
HPS3-204ENST00000462030 PDIA2Q13087 525 aaKnown RBP19.47■□□□□ 0.71
HPS3-204ENST00000462030 CTC1Q2NKJ3 1217 aa19.47■□□□□ 0.71
HPS3-204ENST00000462030 USP37Q86T82 979 aa19.47■□□□□ 0.71
HPS3-204ENST00000462030 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.47■□□□□ 0.71
HPS3-204ENST00000462030 KANSL3Q9P2N6 904 aa19.47■□□□□ 0.71
HPS3-204ENST00000462030 PSMC3IPQ9P2W1 217 aaPredicted RBP19.47■□□□□ 0.71
HPS3-204ENST00000462030 HERC5Q9UII4 1024 aaKnown RBP19.47■□□□□ 0.71
HPS3-204ENST00000462030 DCTN4Q9UJW0 460 aa19.47■□□□□ 0.71
HPS3-204ENST00000462030 C2CD2LO14523 706 aa19.47■□□□□ 0.71
HPS3-204ENST00000462030 RASSF2P50749 326 aa19.47■□□□□ 0.71
HPS3-204ENST00000462030 PSMC5P62195 406 aa19.47■□□□□ 0.71
HPS3-204ENST00000462030 GAD2Q05329 585 aa19.47■□□□□ 0.71
HPS3-204ENST00000462030 OVGP1Q12889 678 aa19.47■□□□□ 0.71
HPS3-204ENST00000462030 AOC3Q16853 763 aa19.47■□□□□ 0.71
HPS3-204ENST00000462030 SLC45A4Q5BKX6 768 aa19.47■□□□□ 0.71
HPS3-204ENST00000462030 RNASEH2BQ5TBB1 312 aaKnown RBP19.47■□□□□ 0.71
HPS3-204ENST00000462030 CC2D2BQ6DHV5 1058 aa19.47■□□□□ 0.71
HPS3-204ENST00000462030 PLEKHA7Q6IQ23 1121 aa19.47■□□□□ 0.71
HPS3-204ENST00000462030 ANO5Q75V66 913 aa19.47■□□□□ 0.71
HPS3-204ENST00000462030 NIPA1Q7RTP0 329 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms