RNA–Protein interactions for RNA: ENST00000461553.1

USP4-206, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 544 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-206ENST00000461553 PRSS36Q5K4E3 855 aa15.09■□□□□ 0.01
USP4-206ENST00000461553 BRSK2Q8IWQ3 736 aa15.09■□□□□ 0.01
USP4-206ENST00000461553 EFCAB13Q8IY85 973 aa15.09■□□□□ 0.01
USP4-206ENST00000461553 SAAL1Q96ER3 474 aa15.09■□□□□ 0.01
USP4-206ENST00000461553 MCRS1Q96EZ8 462 aa15.09■□□□□ 0.01
USP4-206ENST00000461553 ZNF512Q96ME7 567 aaPredicted RBP15.09■□□□□ 0.01
USP4-206ENST00000461553 FAM213AQ9BRX8 229 aa15.09■□□□□ 0.01
USP4-206ENST00000461553 RPP25Q9BUL9 199 aaKnown RBP15.09■□□□□ 0.01
USP4-206ENST00000461553 TMEM206Q9H813 350 aa15.09■□□□□ 0.01
USP4-206ENST00000461553 DPP3Q9NY33 737 aa15.09■□□□□ 0.01
USP4-206ENST00000461553 DSEQ9UL01 958 aa15.09■□□□□ 0.01
USP4-206ENST00000461553 COL4A3Q01955 1670 aa15.09■□□□□ 0.01
USP4-206ENST00000461553 CUTAO60888 179 aa15.08■□□□□ 0
USP4-206ENST00000461553 ECI2O75521 394 aa15.08■□□□□ 0
USP4-206ENST00000461553 LDHAP00338 332 aaKnown RBP15.08■□□□□ 0
USP4-206ENST00000461553 F13A1P00488 732 aa15.08■□□□□ 0
USP4-206ENST00000461553 ZSCAN22P10073 491 aaPredicted RBP15.08■□□□□ 0
USP4-206ENST00000461553 GARTP22102 1010 aa15.08■□□□□ 0
USP4-206ENST00000461553 GPC5P78333 572 aa15.08■□□□□ 0
USP4-206ENST00000461553 AMPD3Q01432 767 aa15.08■□□□□ 0
USP4-206ENST00000461553 GPR17Q13304 367 aa15.08■□□□□ 0
USP4-206ENST00000461553 SV2CQ496J9 727 aa15.08■□□□□ 0
USP4-206ENST00000461553 PHLDB3Q6NSJ2 640 aa15.08■□□□□ 0
USP4-206ENST00000461553 ARMCX5Q6P1M9 558 aa15.08■□□□□ 0
USP4-206ENST00000461553 CRELD2Q6UXH1 353 aaPredicted RBP15.08■□□□□ 0
USP4-206ENST00000461553 METTL23Q86XA0 190 aa15.08■□□□□ 0
USP4-206ENST00000461553 KCNG4Q8TDN1 519 aa15.08■□□□□ 0
USP4-206ENST00000461553 NOC3LQ8WTT2 800 aaKnown RBP15.08■□□□□ 0
USP4-206ENST00000461553 DHX58Q96C10 678 aa15.08■□□□□ 0
USP4-206ENST00000461553 SHDQ96IW2 340 aa15.08■□□□□ 0
USP4-206ENST00000461553 PYM1Q9BRP8 204 aaKnown RBP15.08■□□□□ 0
USP4-206ENST00000461553 RBAKQ9NYW8 714 aaPredicted RBP15.08■□□□□ 0
USP4-206ENST00000461553 TFIP11Q9UBB9 837 aaKnown RBP15.08■□□□□ 0
USP4-206ENST00000461553 FAM186AA6NE01 2351 aa15.08■□□□□ 0
USP4-206ENST00000461553 CACNA1IQ9P0X4 2223 aa15.08■□□□□ 0
USP4-206ENST00000461553 F5P12259 2224 aa15.07■□□□□ 0
USP4-206ENST00000461553 MTMR11A4FU01 709 aa15.07■□□□□ 0
USP4-206ENST00000461553 SPTLC1O15269 473 aa15.07■□□□□ 0
USP4-206ENST00000461553 PI15O43692 258 aa15.07■□□□□ 0
USP4-206ENST00000461553 MICAL2O94851 1124 aa15.07■□□□□ 0
USP4-206ENST00000461553 CYP11A1P05108 521 aa15.07■□□□□ 0
USP4-206ENST00000461553 MYL4P12829 197 aa15.07■□□□□ 0
USP4-206ENST00000461553 PNPLA4P41247 253 aa15.07■□□□□ 0
USP4-206ENST00000461553 EPHB3P54753 998 aa15.07■□□□□ 0
USP4-206ENST00000461553 ASIC1P78348 528 aa15.07■□□□□ 0
USP4-206ENST00000461553 TFAMQ00059 246 aaKnown RBP15.07■□□□□ 0
USP4-206ENST00000461553 MLF2Q15773 248 aaPredicted RBP15.07■□□□□ 0
USP4-206ENST00000461553 E2F4Q16254 413 aa15.07■□□□□ 0
USP4-206ENST00000461553 FOXD4L6Q3SYB3 417 aaPredicted RBP15.07■□□□□ 0
USP4-206ENST00000461553 FOXD4L3Q6VB84 417 aaPredicted RBP15.07■□□□□ 0
USP4-206ENST00000461553 IQUBQ8NA54 791 aa15.07■□□□□ 0
USP4-206ENST00000461553 DTWD2Q8NBA8 298 aa15.07■□□□□ 0
USP4-206ENST00000461553 TCEAL4Q96EI5 215 aa15.07■□□□□ 0
USP4-206ENST00000461553 FGFBP2Q9BYJ0 223 aa15.07■□□□□ 0
USP4-206ENST00000461553 MAGEF1Q9HAY2 307 aa15.07■□□□□ 0
USP4-206ENST00000461553 CEP72Q9P209 647 aa15.07■□□□□ 0
USP4-206ENST00000461553 RIF1Q5UIP0 2472 aaKnown RBP15.07■□□□□ 0
USP4-206ENST00000461553 ZFHX2Q9C0A1 2572 aaPredicted RBP15.07■□□□□ 0
USP4-206ENST00000461553 CYB561D2O14569 222 aa15.06■□□□□ 0
USP4-206ENST00000461553 KIAA0391O15091 583 aaKnown RBP15.06■□□□□ 0
USP4-206ENST00000461553 EXTL3O43909 919 aa15.06■□□□□ 0
USP4-206ENST00000461553 PRPF6O94906 941 aaKnown RBP15.06■□□□□ 0
USP4-206ENST00000461553 VNN2O95498 520 aa15.06■□□□□ 0
USP4-206ENST00000461553 CCR2P41597 374 aa15.06■□□□□ 0
USP4-206ENST00000461553 ALDH1A3P47895 512 aa15.06■□□□□ 0
USP4-206ENST00000461553 EPHA5P54756 1037 aa15.06■□□□□ 0
USP4-206ENST00000461553 PRKCQQ04759 706 aa15.06■□□□□ 0
USP4-206ENST00000461553 DUSP4Q13115 394 aa15.06■□□□□ 0
USP4-206ENST00000461553 HS6ST3Q8IZP7 471 aa15.06■□□□□ 0
USP4-206ENST00000461553 THEM5Q8N1Q8 247 aa15.06■□□□□ 0
USP4-206ENST00000461553 PJA1Q8NG27 643 aa15.06■□□□□ 0
USP4-206ENST00000461553 OR10T2Q8NGX3 314 aa15.06■□□□□ 0
USP4-206ENST00000461553 CACTINQ8WUQ7 758 aaKnown RBP15.06■□□□□ 0
USP4-206ENST00000461553 ELSPBP1Q96BH3 223 aa15.06■□□□□ 0
USP4-206ENST00000461553 CBWD1Q9BRT8 395 aa15.06■□□□□ 0
USP4-206ENST00000461553 TRIM9Q9C026 710 aa15.06■□□□□ 0
USP4-206ENST00000461553 SLITRK6Q9H5Y7 841 aa15.06■□□□□ 0
USP4-206ENST00000461553 ZFP14Q9HCL3 533 aa15.06■□□□□ 0
USP4-206ENST00000461553 KBTBD4Q9NVX7 518 aa15.06■□□□□ 0
USP4-206ENST00000461553 FAM13BQ9NYF5 915 aa15.06■□□□□ 0
USP4-206ENST00000461553 PTPRDP23468 1912 aa15.05■□□□□ 0
USP4-206ENST00000461553 GOLGA8IPA6NC78 632 aa15.05■□□□□ -0
USP4-206ENST00000461553 GOLGA8JA6NMD2 632 aa15.05■□□□□ -0
USP4-206ENST00000461553 EIF3DO15371 548 aaKnown RBP eCLIP15.05■□□□□ -0
USP4-206ENST00000461553 GFRA3O60609 400 aa15.05■□□□□ -0
USP4-206ENST00000461553 ITGB3P05106 788 aa15.05■□□□□ -0
USP4-206ENST00000461553 POLR2BP30876 1174 aaKnown RBP15.05■□□□□ -0
USP4-206ENST00000461553 ME1P48163 572 aa15.05■□□□□ -0
USP4-206ENST00000461553 STARD6P59095 220 aa15.05■□□□□ -0
USP4-206ENST00000461553 SNW1Q13573 536 aaKnown RBP15.05■□□□□ -0
USP4-206ENST00000461553 VEPH1Q14D04 833 aa15.05■□□□□ -0
USP4-206ENST00000461553 ANGPT1Q15389 498 aa15.05■□□□□ -0
USP4-206ENST00000461553 SLC39A12Q504Y0 691 aa15.05■□□□□ -0
USP4-206ENST00000461553 CENPPQ6IPU0 288 aa15.05■□□□□ -0
USP4-206ENST00000461553 SHC4Q6S5L8 630 aa15.05■□□□□ -0
USP4-206ENST00000461553 ITIH5Q86UX2 942 aa15.05■□□□□ -0
USP4-206ENST00000461553 GPD1LQ8N335 351 aa15.05■□□□□ -0
USP4-206ENST00000461553 ATAD1Q8NBU5 361 aa15.05■□□□□ -0
USP4-206ENST00000461553 ASB16Q96NS5 453 aa15.05■□□□□ -0
USP4-206ENST00000461553 TMEM209Q96SK2 561 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms