RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 BRCC3P46736 316 aa14.3□□□□□ -0.12
RAB11FIP3-207ENST00000461009 NHLH1Q02575 133 aa14.3□□□□□ -0.12
RAB11FIP3-207ENST00000461009 VARS2Q5ST30 1063 aaKnown RBP14.3□□□□□ -0.12
RAB11FIP3-207ENST00000461009 GRASPQ7Z6J2 395 aaPredicted RBP14.3□□□□□ -0.12
RAB11FIP3-207ENST00000461009 SLC9A9Q8IVB4 645 aa14.3□□□□□ -0.12
RAB11FIP3-207ENST00000461009 ZNF461Q8TAF7 563 aa14.3□□□□□ -0.12
RAB11FIP3-207ENST00000461009 SLC7A14Q8TBB6 771 aa14.3□□□□□ -0.12
RAB11FIP3-207ENST00000461009 TMEM174Q8WUU8 243 aa14.3□□□□□ -0.12
RAB11FIP3-207ENST00000461009 FNBP1Q96RU3 617 aa14.3□□□□□ -0.12
RAB11FIP3-207ENST00000461009 OXCT2Q9BYC2 517 aaPredicted RBP14.3□□□□□ -0.12
RAB11FIP3-207ENST00000461009 DPP3Q9NY33 737 aa14.3□□□□□ -0.12
RAB11FIP3-207ENST00000461009 MAPK8IP1Q9UQF2 711 aa14.3□□□□□ -0.12
RAB11FIP3-207ENST00000461009 TRAF3IP3Q9Y228 551 aa14.3□□□□□ -0.12
RAB11FIP3-207ENST00000461009 FRMD4BQ9Y2L6 1034 aa14.3□□□□□ -0.12
RAB11FIP3-207ENST00000461009 DENND4AQ7Z401 1863 aa14.29□□□□□ -0.12
RAB11FIP3-207ENST00000461009 C2orf16Q68DN1 1984 aa14.29□□□□□ -0.12
RAB11FIP3-207ENST00000461009 ARHGEF37A1IGU5 675 aa14.29□□□□□ -0.12
RAB11FIP3-207ENST00000461009 I3L4J1 428 aa14.29□□□□□ -0.12
RAB11FIP3-207ENST00000461009 STK25O00506 426 aa14.29□□□□□ -0.12
RAB11FIP3-207ENST00000461009 PRRG1O14668 218 aa14.29□□□□□ -0.12
RAB11FIP3-207ENST00000461009 CCL16O15467 120 aa14.29□□□□□ -0.12
RAB11FIP3-207ENST00000461009 LRG1P02750 347 aa14.29□□□□□ -0.12
RAB11FIP3-207ENST00000461009 NR3C1P04150 777 aa14.29□□□□□ -0.12
RAB11FIP3-207ENST00000461009 NFICP08651 508 aa14.29□□□□□ -0.12
RAB11FIP3-207ENST00000461009 POU2F2P09086 479 aa14.29□□□□□ -0.12
RAB11FIP3-207ENST00000461009 CLCN5P51795 746 aa14.29□□□□□ -0.12
RAB11FIP3-207ENST00000461009 TFAMQ00059 246 aaKnown RBP14.29□□□□□ -0.12
RAB11FIP3-207ENST00000461009 SNRNP35Q16560 246 aaKnown RBP14.29□□□□□ -0.12
RAB11FIP3-207ENST00000461009 DUOXA2Q1HG44 320 aa14.29□□□□□ -0.12
RAB11FIP3-207ENST00000461009 COBLL1Q53SF7 1204 aa14.29□□□□□ -0.12
RAB11FIP3-207ENST00000461009 IER5LQ5T953 404 aa14.29□□□□□ -0.12
RAB11FIP3-207ENST00000461009 ASTLQ6HA08 431 aaPredicted RBP14.29□□□□□ -0.12
RAB11FIP3-207ENST00000461009 MTSS1LQ765P7 747 aa14.29□□□□□ -0.12
RAB11FIP3-207ENST00000461009 ZSWIM2Q8NEG5 633 aa14.29□□□□□ -0.12
RAB11FIP3-207ENST00000461009 ERCC4Q92889 916 aaPredicted RBP14.29□□□□□ -0.12
RAB11FIP3-207ENST00000461009 ANKRD36BP1Q96IX9 119 aa14.29□□□□□ -0.12
RAB11FIP3-207ENST00000461009 MYADMQ96S97 322 aa14.29□□□□□ -0.12
RAB11FIP3-207ENST00000461009 PDE11AQ9HCR9 933 aa14.29□□□□□ -0.12
RAB11FIP3-207ENST00000461009 LMBRD1Q9NUN5 540 aa14.29□□□□□ -0.12
RAB11FIP3-207ENST00000461009 TUBGCP4Q9UGJ1 667 aa14.29□□□□□ -0.12
RAB11FIP3-207ENST00000461009 MAFFQ9ULX9 164 aa14.29□□□□□ -0.12
RAB11FIP3-207ENST00000461009 ADAM12O43184 909 aa14.28□□□□□ -0.12
RAB11FIP3-207ENST00000461009 TNNC2P02585 160 aa14.28□□□□□ -0.12
RAB11FIP3-207ENST00000461009 TMEM191BP0C7N4 346 aa14.28□□□□□ -0.12
RAB11FIP3-207ENST00000461009 PRCPP42785 496 aa14.28□□□□□ -0.12
RAB11FIP3-207ENST00000461009 VCPP55072 806 aaKnown RBP14.28□□□□□ -0.12
RAB11FIP3-207ENST00000461009 ARPP19P56211 112 aa14.28□□□□□ -0.12
RAB11FIP3-207ENST00000461009 CYP24A1Q07973 514 aa14.28□□□□□ -0.12
RAB11FIP3-207ENST00000461009 NFIL3Q16649 462 aa14.28□□□□□ -0.12
RAB11FIP3-207ENST00000461009 CTXN3Q4LDR2 81 aa14.28□□□□□ -0.12
RAB11FIP3-207ENST00000461009 C9orf57Q5W0N0 161 aa14.28□□□□□ -0.12
RAB11FIP3-207ENST00000461009 TPGS2Q68CL5 300 aa14.28□□□□□ -0.12
RAB11FIP3-207ENST00000461009 SLC8B1Q6J4K2 584 aa14.28□□□□□ -0.12
RAB11FIP3-207ENST00000461009 ZNF280DQ6N043 979 aa14.28□□□□□ -0.12
RAB11FIP3-207ENST00000461009 CD300LGQ6UXG3 332 aa14.28□□□□□ -0.12
RAB11FIP3-207ENST00000461009 USP37Q86T82 979 aa14.28□□□□□ -0.12
RAB11FIP3-207ENST00000461009 ALYREFQ86V81 257 aaKnown RBP14.28□□□□□ -0.12
RAB11FIP3-207ENST00000461009 CBWD2Q8IUF1 395 aa14.28□□□□□ -0.12
RAB11FIP3-207ENST00000461009 ELMOD1Q8N336 334 aa14.28□□□□□ -0.12
RAB11FIP3-207ENST00000461009 SLC44A3Q8N4M1 653 aa14.28□□□□□ -0.12
RAB11FIP3-207ENST00000461009 C3orf58Q8NDZ4 430 aa14.28□□□□□ -0.12
RAB11FIP3-207ENST00000461009 FLCNQ8NFG4 579 aa14.28□□□□□ -0.12
RAB11FIP3-207ENST00000461009 FEZF2Q8TBJ5 459 aa14.28□□□□□ -0.12
RAB11FIP3-207ENST00000461009 SUSD3Q96L08 255 aa14.28□□□□□ -0.12
RAB11FIP3-207ENST00000461009 TSG101Q99816 390 aa14.28□□□□□ -0.12
RAB11FIP3-207ENST00000461009 SMOC2Q9H3U7 446 aa14.28□□□□□ -0.12
RAB11FIP3-207ENST00000461009 DMAC2Q9NW81 257 aa14.28□□□□□ -0.12
RAB11FIP3-207ENST00000461009 KIAA1468Q9P260 1216 aa14.28□□□□□ -0.12
RAB11FIP3-207ENST00000461009 WNT16Q9UBV4 365 aa14.28□□□□□ -0.12
RAB11FIP3-207ENST00000461009 MAN1B1Q9UKM7 699 aa14.28□□□□□ -0.12
RAB11FIP3-207ENST00000461009 CDH7Q9ULB5 785 aa14.28□□□□□ -0.12
RAB11FIP3-207ENST00000461009 PIRO00625 290 aa14.27□□□□□ -0.13
RAB11FIP3-207ENST00000461009 N4BP1O75113 896 aaKnown RBP14.27□□□□□ -0.13
RAB11FIP3-207ENST00000461009 PDGFBP01127 241 aaPredicted RBP14.27□□□□□ -0.13
RAB11FIP3-207ENST00000461009 SRFP11831 508 aa14.27□□□□□ -0.13
RAB11FIP3-207ENST00000461009 PTPN2P17706 415 aa14.27□□□□□ -0.13
RAB11FIP3-207ENST00000461009 TNNI1P19237 187 aa14.27□□□□□ -0.13
RAB11FIP3-207ENST00000461009 PNPLA4P41247 253 aa14.27□□□□□ -0.13
RAB11FIP3-207ENST00000461009 GUCY2FP51841 1108 aa14.27□□□□□ -0.13
RAB11FIP3-207ENST00000461009 ADAM9Q13443 819 aa14.27□□□□□ -0.13
RAB11FIP3-207ENST00000461009 PSMD6Q15008 389 aa14.27□□□□□ -0.13
RAB11FIP3-207ENST00000461009 CAMK4Q16566 473 aa14.27□□□□□ -0.13
RAB11FIP3-207ENST00000461009 EDRF1Q3B7T1 1238 aa14.27□□□□□ -0.13
RAB11FIP3-207ENST00000461009 PABPC1LQ4VXU2 614 aaKnown RBP14.27□□□□□ -0.13
RAB11FIP3-207ENST00000461009 ISM2Q6H9L7 571 aa14.27□□□□□ -0.13
RAB11FIP3-207ENST00000461009 DSTYKQ6XUX3 929 aa14.27□□□□□ -0.13
RAB11FIP3-207ENST00000461009 EFCAB13Q8IY85 973 aa14.27□□□□□ -0.13
RAB11FIP3-207ENST00000461009 SMYD4Q8IYR2 804 aaPredicted RBP14.27□□□□□ -0.13
RAB11FIP3-207ENST00000461009 SIX5Q8N196 739 aa14.27□□□□□ -0.13
RAB11FIP3-207ENST00000461009 TRIML1Q8N9V2 468 aa14.27□□□□□ -0.13
RAB11FIP3-207ENST00000461009 PRSS33Q8NF86 280 aa14.27□□□□□ -0.13
RAB11FIP3-207ENST00000461009 ATOH1Q92858 354 aaPredicted RBP14.27□□□□□ -0.13
RAB11FIP3-207ENST00000461009 DHTKD1Q96HY7 919 aaPredicted RBP14.27□□□□□ -0.13
RAB11FIP3-207ENST00000461009 RTP3Q9BQQ7 232 aa14.27□□□□□ -0.13
RAB11FIP3-207ENST00000461009 CYP4F11Q9HBI6 524 aa14.27□□□□□ -0.13
RAB11FIP3-207ENST00000461009 INTS13Q9NVM9 706 aa14.27□□□□□ -0.13
RAB11FIP3-207ENST00000461009 ITGA11Q9UKX5 1188 aa14.27□□□□□ -0.13
RAB11FIP3-207ENST00000461009 PCDHB8Q9UN66 801 aa14.27□□□□□ -0.13
RAB11FIP3-207ENST00000461009 ANO9A1A5B4 782 aa14.26□□□□□ -0.13
RAB11FIP3-207ENST00000461009 ZNF197O14709 1029 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms