RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 PTPDC1A2A3K4 754 aa5.54□□□□□ -1.52
ATPAF1-203ENST00000460928 CCDC66A2RUB6 948 aa5.54□□□□□ -1.52
ATPAF1-203ENST00000460928 ERC2O15083 957 aa5.54□□□□□ -1.52
ATPAF1-203ENST00000460928 MAFGO15525 162 aa5.54□□□□□ -1.52
ATPAF1-203ENST00000460928 GPAA1O43292 621 aa5.54□□□□□ -1.52
ATPAF1-203ENST00000460928 LAMTOR5O43504 91 aa5.54□□□□□ -1.52
ATPAF1-203ENST00000460928 B4GALT3O60512 393 aa5.54□□□□□ -1.52
ATPAF1-203ENST00000460928 TADA3O75528 432 aa5.54□□□□□ -1.52
ATPAF1-203ENST00000460928 FBXO21O94952 628 aa5.54□□□□□ -1.52
ATPAF1-203ENST00000460928 LDHCP07864 332 aa5.54□□□□□ -1.52
ATPAF1-203ENST00000460928 ATP2A2P16615 1042 aaKnown RBP5.54□□□□□ -1.52
ATPAF1-203ENST00000460928 KPNA1P52294 538 aaPredicted RBP5.54□□□□□ -1.52
ATPAF1-203ENST00000460928 ZXDAP98168 799 aa5.54□□□□□ -1.52
ATPAF1-203ENST00000460928 FAPQ12884 760 aa5.54□□□□□ -1.52
ATPAF1-203ENST00000460928 LSAMPQ13449 338 aa5.54□□□□□ -1.52
ATPAF1-203ENST00000460928 PIN1Q13526 163 aaPredicted RBP5.54□□□□□ -1.52
ATPAF1-203ENST00000460928 CYP4F22Q6NT55 531 aa5.54□□□□□ -1.52
ATPAF1-203ENST00000460928 GLB1LQ6UWU2 654 aa5.54□□□□□ -1.52
ATPAF1-203ENST00000460928 CWC27Q6UX04 472 aaKnown RBP5.54□□□□□ -1.52
ATPAF1-203ENST00000460928 C16orf59Q7L2K0 433 aa5.54□□□□□ -1.52
ATPAF1-203ENST00000460928 PLEKHH3Q7Z736 793 aa5.54□□□□□ -1.52
ATPAF1-203ENST00000460928 C14orf80Q86SX3 495 aa5.54□□□□□ -1.52
ATPAF1-203ENST00000460928 C11orf74Q86VG3 221 aa5.54□□□□□ -1.52
ATPAF1-203ENST00000460928 ZGPATQ8N5A5 531 aaKnown RBP5.54□□□□□ -1.52
ATPAF1-203ENST00000460928 C2orf69Q8N8R5 385 aa5.54□□□□□ -1.52
ATPAF1-203ENST00000460928 CHST14Q8NCH0 376 aa5.54□□□□□ -1.52
ATPAF1-203ENST00000460928 DVL3Q92997 716 aaPredicted RBP5.54□□□□□ -1.52
ATPAF1-203ENST00000460928 EVI5LQ96CN4 794 aa5.54□□□□□ -1.52
ATPAF1-203ENST00000460928 MBD6Q96DN6 1003 aa5.54□□□□□ -1.52
ATPAF1-203ENST00000460928 TOE1Q96GM8 510 aaKnown RBP5.54□□□□□ -1.52
ATPAF1-203ENST00000460928 CHAMP1Q96JM3 812 aa5.54□□□□□ -1.52
ATPAF1-203ENST00000460928 STRBPQ96SI9 672 aaKnown RBP5.54□□□□□ -1.52
ATPAF1-203ENST00000460928 MENTQ9BUN1 341 aa5.54□□□□□ -1.52
ATPAF1-203ENST00000460928 CDH19Q9H159 772 aa5.54□□□□□ -1.52
ATPAF1-203ENST00000460928 EMC7Q9NPA0 242 aa5.54□□□□□ -1.52
ATPAF1-203ENST00000460928 HSPBP1Q9NZL4 362 aa5.54□□□□□ -1.52
ATPAF1-203ENST00000460928 FBXL7Q9UJT9 491 aa5.54□□□□□ -1.52
ATPAF1-203ENST00000460928 SLC4A4Q9Y6R1 1079 aa5.54□□□□□ -1.52
ATPAF1-203ENST00000460928 TRPM7Q96QT4 1865 aa5.54□□□□□ -1.52
ATPAF1-203ENST00000460928 RANBP2P49792 3224 aaKnown RBP5.53□□□□□ -1.52
ATPAF1-203ENST00000460928 FLT1P17948 1338 aa5.53□□□□□ -1.52
ATPAF1-203ENST00000460928 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.53□□□□□ -1.52
ATPAF1-203ENST00000460928 TCRBV5S2A0A599 114 aa5.53□□□□□ -1.52
ATPAF1-203ENST00000460928 PEX14O75381 377 aa5.53□□□□□ -1.52
ATPAF1-203ENST00000460928 ULK1O75385 1050 aa5.53□□□□□ -1.52
ATPAF1-203ENST00000460928 CYP7B1O75881 506 aa5.53□□□□□ -1.52
ATPAF1-203ENST00000460928 GRK2P25098 689 aa5.53□□□□□ -1.52
ATPAF1-203ENST00000460928 CHMLP26374 656 aa5.53□□□□□ -1.52
ATPAF1-203ENST00000460928 GRK3P35626 688 aa5.53□□□□□ -1.52
ATPAF1-203ENST00000460928 PLCD1P51178 756 aa5.53□□□□□ -1.52
ATPAF1-203ENST00000460928 GSTO1P78417 241 aa5.53□□□□□ -1.52
ATPAF1-203ENST00000460928 PTH1RQ03431 593 aa5.53□□□□□ -1.52
ATPAF1-203ENST00000460928 UBE3CQ15386 1083 aa5.53□□□□□ -1.52
ATPAF1-203ENST00000460928 CRY1Q16526 586 aa5.53□□□□□ -1.52
ATPAF1-203ENST00000460928 ARHGAP44Q17R89 818 aa5.53□□□□□ -1.52
ATPAF1-203ENST00000460928 CERS3Q8IU89 383 aa5.53□□□□□ -1.52
ATPAF1-203ENST00000460928 APOBEC3FQ8IUX4 373 aaKnown RBP5.53□□□□□ -1.52
ATPAF1-203ENST00000460928 FAM151AQ8WW52 585 aa5.53□□□□□ -1.52
ATPAF1-203ENST00000460928 ZKSCAN4Q969J2 545 aaPredicted RBP5.53□□□□□ -1.52
ATPAF1-203ENST00000460928 WRNIP1Q96S55 665 aa5.53□□□□□ -1.52
ATPAF1-203ENST00000460928 CCDC94Q9BW85 323 aaPredicted RBP5.53□□□□□ -1.52
ATPAF1-203ENST00000460928 MRIQ9BWK5 157 aa5.53□□□□□ -1.52
ATPAF1-203ENST00000460928 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.53□□□□□ -1.52
ATPAF1-203ENST00000460928 OSBPL5Q9H0X9 879 aaPredicted RBP5.53□□□□□ -1.52
ATPAF1-203ENST00000460928 DNAJC18Q9H819 358 aa5.53□□□□□ -1.52
ATPAF1-203ENST00000460928 CATSPERZQ9NTU4 200 aa5.53□□□□□ -1.52
ATPAF1-203ENST00000460928 PPARGC1AQ9UBK2 798 aaKnown RBP5.53□□□□□ -1.52
ATPAF1-203ENST00000460928 KCNG1Q9UIX4 513 aa5.53□□□□□ -1.52
ATPAF1-203ENST00000460928 ZNF180Q9UJW8 692 aa5.53□□□□□ -1.52
ATPAF1-203ENST00000460928 NAV1Q8NEY1 1877 aa5.53□□□□□ -1.52
ATPAF1-203ENST00000460928 ATRNL1Q5VV63 1379 aa5.53□□□□□ -1.52
ATPAF1-203ENST00000460928 FOCADQ5VW36 1801 aa5.53□□□□□ -1.52
ATPAF1-203ENST00000460928 OTOFQ9HC10 1997 aa5.53□□□□□ -1.52
ATPAF1-203ENST00000460928 BRCA2P51587 3418 aa5.52□□□□□ -1.53
ATPAF1-203ENST00000460928 ZNF536O15090 1300 aa5.52□□□□□ -1.53
ATPAF1-203ENST00000460928 TTC36A6NLP5 189 aa5.52□□□□□ -1.53
ATPAF1-203ENST00000460928 K7ESF4 209 aa5.52□□□□□ -1.53
ATPAF1-203ENST00000460928 DYNC1I1O14576 645 aa5.52□□□□□ -1.53
ATPAF1-203ENST00000460928 PRDM1O75626 825 aa5.52□□□□□ -1.53
ATPAF1-203ENST00000460928 BAG3O95817 575 aa5.52□□□□□ -1.53
ATPAF1-203ENST00000460928 ZSCAN20P17040 1043 aaPredicted RBP5.52□□□□□ -1.53
ATPAF1-203ENST00000460928 MAP2K2P36507 400 aa5.52□□□□□ -1.53
ATPAF1-203ENST00000460928 GNALP38405 381 aa5.52□□□□□ -1.53
ATPAF1-203ENST00000460928 HUNKP57058 714 aa5.52□□□□□ -1.53
ATPAF1-203ENST00000460928 HAND2P61296 217 aa5.52□□□□□ -1.53
ATPAF1-203ENST00000460928 PTPN21Q16825 1174 aa5.52□□□□□ -1.53
ATPAF1-203ENST00000460928 STEAP3Q658P3 488 aa5.52□□□□□ -1.53
ATPAF1-203ENST00000460928 TEPPQ6URK8 271 aa5.52□□□□□ -1.53
ATPAF1-203ENST00000460928 CISD2Q8N5K1 135 aaKnown RBP5.52□□□□□ -1.53
ATPAF1-203ENST00000460928 ARRDC4Q8NCT1 418 aa5.52□□□□□ -1.53
ATPAF1-203ENST00000460928 CHST13Q8NET6 341 aa5.52□□□□□ -1.53
ATPAF1-203ENST00000460928 PHOSPHO1Q8TCT1 267 aa5.52□□□□□ -1.53
ATPAF1-203ENST00000460928 AHCYL2Q96HN2 611 aaKnown RBP5.52□□□□□ -1.53
ATPAF1-203ENST00000460928 CLIC6Q96NY7 704 aa5.52□□□□□ -1.53
ATPAF1-203ENST00000460928 TMEM209Q96SK2 561 aa5.52□□□□□ -1.53
ATPAF1-203ENST00000460928 KCNJ15Q99712 375 aa5.52□□□□□ -1.53
ATPAF1-203ENST00000460928 NOL10Q9BSC4 688 aaKnown RBP5.52□□□□□ -1.53
ATPAF1-203ENST00000460928 IDI2Q9BXS1 227 aa5.52□□□□□ -1.53
ATPAF1-203ENST00000460928 CDIP1Q9H305 208 aa5.52□□□□□ -1.53
ATPAF1-203ENST00000460928 EPB41L1Q9H4G0 881 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms