RNA–Protein interactions for RNA: ENST00000460739.5

SOX2-OT-201, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 609 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-201ENST00000460739 DPP3Q9NY33 737 aa12.78□□□□□ -0.36
SOX2-OT-201ENST00000460739 TFIP11Q9UBB9 837 aaKnown RBP12.78□□□□□ -0.36
SOX2-OT-201ENST00000460739 YIPF1Q9Y548 306 aa12.78□□□□□ -0.36
SOX2-OT-201ENST00000460739 COL4A2P08572 1712 aa12.78□□□□□ -0.36
SOX2-OT-201ENST00000460739 PATJQ8NI35 1801 aa12.77□□□□□ -0.37
SOX2-OT-201ENST00000460739 NUP210Q8TEM1 1887 aaPredicted RBP12.77□□□□□ -0.37
SOX2-OT-201ENST00000460739 MOSPD3O75425 235 aa12.77□□□□□ -0.37
SOX2-OT-201ENST00000460739 YEATS4O95619 227 aa12.77□□□□□ -0.37
SOX2-OT-201ENST00000460739 LDHAP00338 332 aaKnown RBP12.77□□□□□ -0.37
SOX2-OT-201ENST00000460739 GARTP22102 1010 aa12.77□□□□□ -0.37
SOX2-OT-201ENST00000460739 FCARP24071 287 aa12.77□□□□□ -0.37
SOX2-OT-201ENST00000460739 TAF6P49848 677 aa12.77□□□□□ -0.37
SOX2-OT-201ENST00000460739 PFKPQ01813 784 aa12.77□□□□□ -0.37
SOX2-OT-201ENST00000460739 PRKCQQ04759 706 aa12.77□□□□□ -0.37
SOX2-OT-201ENST00000460739 DUSP4Q13115 394 aa12.77□□□□□ -0.37
SOX2-OT-201ENST00000460739 PLD1Q13393 1074 aa12.77□□□□□ -0.37
SOX2-OT-201ENST00000460739 TANGO2Q6ICL3 276 aa12.77□□□□□ -0.37
SOX2-OT-201ENST00000460739 CENPPQ6IPU0 288 aa12.77□□□□□ -0.37
SOX2-OT-201ENST00000460739 CCDC65Q8IXS2 484 aa12.77□□□□□ -0.37
SOX2-OT-201ENST00000460739 HS6ST3Q8IZP7 471 aa12.77□□□□□ -0.37
SOX2-OT-201ENST00000460739 ELSPBP1Q96BH3 223 aa12.77□□□□□ -0.37
SOX2-OT-201ENST00000460739 PGLYRP2Q96PD5 576 aa12.77□□□□□ -0.37
SOX2-OT-201ENST00000460739 FAM213AQ9BRX8 229 aa12.77□□□□□ -0.37
SOX2-OT-201ENST00000460739 DDX23Q9BUQ8 820 aaKnown RBP12.77□□□□□ -0.37
SOX2-OT-201ENST00000460739 FGFBP2Q9BYJ0 223 aa12.77□□□□□ -0.37
SOX2-OT-201ENST00000460739 PLA2G2FQ9BZM2 168 aa12.77□□□□□ -0.37
SOX2-OT-201ENST00000460739 LRRC27Q9C0I9 530 aa12.77□□□□□ -0.37
SOX2-OT-201ENST00000460739 CRISPLD1Q9H336 500 aa12.77□□□□□ -0.37
SOX2-OT-201ENST00000460739 CUEDC2Q9H467 287 aa12.77□□□□□ -0.37
SOX2-OT-201ENST00000460739 TMEM206Q9H813 350 aa12.77□□□□□ -0.37
SOX2-OT-201ENST00000460739 ASAH2Q9NR71 780 aa12.77□□□□□ -0.37
SOX2-OT-201ENST00000460739 KBTBD4Q9NVX7 518 aa12.77□□□□□ -0.37
SOX2-OT-201ENST00000460739 DLGAP2Q9P1A6 1054 aa12.77□□□□□ -0.37
SOX2-OT-201ENST00000460739 HSFX1Q9UBD0 423 aa12.77□□□□□ -0.37
SOX2-OT-201ENST00000460739 DSEQ9UL01 958 aa12.77□□□□□ -0.37
SOX2-OT-201ENST00000460739 SIT1Q9Y3P8 196 aa12.77□□□□□ -0.37
SOX2-OT-201ENST00000460739 ZFHX2Q9C0A1 2572 aaPredicted RBP12.77□□□□□ -0.37
SOX2-OT-201ENST00000460739 VPS13AQ96RL7 3174 aa12.77□□□□□ -0.37
SOX2-OT-201ENST00000460739 MTMR11A4FU01 709 aa12.76□□□□□ -0.37
SOX2-OT-201ENST00000460739 NRG2O14511 850 aaPredicted RBP12.76□□□□□ -0.37
SOX2-OT-201ENST00000460739 CYB561D2O14569 222 aa12.76□□□□□ -0.37
SOX2-OT-201ENST00000460739 CUTAO60888 179 aa12.76□□□□□ -0.37
SOX2-OT-201ENST00000460739 SNW1Q13573 536 aaKnown RBP12.76□□□□□ -0.37
SOX2-OT-201ENST00000460739 ANGPT1Q15389 498 aa12.76□□□□□ -0.37
SOX2-OT-201ENST00000460739 MLF2Q15773 248 aaPredicted RBP12.76□□□□□ -0.37
SOX2-OT-201ENST00000460739 SLC44A4Q53GD3 710 aa12.76□□□□□ -0.37
SOX2-OT-201ENST00000460739 FAM78AQ5JUQ0 283 aa12.76□□□□□ -0.37
SOX2-OT-201ENST00000460739 ARMCX5Q6P1M9 558 aa12.76□□□□□ -0.37
SOX2-OT-201ENST00000460739 HSCBQ8IWL3 235 aa12.76□□□□□ -0.37
SOX2-OT-201ENST00000460739 BRSK2Q8IWQ3 736 aa12.76□□□□□ -0.37
SOX2-OT-201ENST00000460739 SYCP3Q8IZU3 236 aa12.76□□□□□ -0.37
SOX2-OT-201ENST00000460739 ZSWIM2Q8NEG5 633 aa12.76□□□□□ -0.37
SOX2-OT-201ENST00000460739 PJA1Q8NG27 643 aa12.76□□□□□ -0.37
SOX2-OT-201ENST00000460739 OR10T2Q8NGX3 314 aa12.76□□□□□ -0.37
SOX2-OT-201ENST00000460739 SAAL1Q96ER3 474 aa12.76□□□□□ -0.37
SOX2-OT-201ENST00000460739 BORCS6Q96GS4 357 aa12.76□□□□□ -0.37
SOX2-OT-201ENST00000460739 ASB16Q96NS5 453 aa12.76□□□□□ -0.37
SOX2-OT-201ENST00000460739 TMEM209Q96SK2 561 aa12.76□□□□□ -0.37
SOX2-OT-201ENST00000460739 LRRC3Q9BY71 257 aa12.76□□□□□ -0.37
SOX2-OT-201ENST00000460739 DNAJC25Q9H1X3 360 aa12.76□□□□□ -0.37
SOX2-OT-201ENST00000460739 TICRRQ7Z2Z1 1910 aa12.76□□□□□ -0.37
SOX2-OT-201ENST00000460739 KANSL1LA0AUZ9 987 aa12.75□□□□□ -0.37
SOX2-OT-201ENST00000460739 KPNA7A9QM74 516 aa12.75□□□□□ -0.37
SOX2-OT-201ENST00000460739 EXTL3O43909 919 aa12.75□□□□□ -0.37
SOX2-OT-201ENST00000460739 GFRA3O60609 400 aa12.75□□□□□ -0.37
SOX2-OT-201ENST00000460739 DCNP07585 359 aaKnown RBP12.75□□□□□ -0.37
SOX2-OT-201ENST00000460739 ZSCAN22P10073 491 aaPredicted RBP12.75□□□□□ -0.37
SOX2-OT-201ENST00000460739 MYL4P12829 197 aa12.75□□□□□ -0.37
SOX2-OT-201ENST00000460739 ALDH1A3P47895 512 aa12.75□□□□□ -0.37
SOX2-OT-201ENST00000460739 EPHB3P54753 998 aa12.75□□□□□ -0.37
SOX2-OT-201ENST00000460739 WNT7BP56706 349 aa12.75□□□□□ -0.37
SOX2-OT-201ENST00000460739 SV2CQ496J9 727 aa12.75□□□□□ -0.37
SOX2-OT-201ENST00000460739 DENND4CQ5VZ89 1909 aa12.75□□□□□ -0.37
SOX2-OT-201ENST00000460739 CNNM4Q6P4Q7 775 aa12.75□□□□□ -0.37
SOX2-OT-201ENST00000460739 SHC4Q6S5L8 630 aa12.75□□□□□ -0.37
SOX2-OT-201ENST00000460739 METTL23Q86XA0 190 aa12.75□□□□□ -0.37
SOX2-OT-201ENST00000460739 TMC8Q8IU68 726 aa12.75□□□□□ -0.37
SOX2-OT-201ENST00000460739 ATAD1Q8NBU5 361 aa12.75□□□□□ -0.37
SOX2-OT-201ENST00000460739 SMARCD2Q92925 531 aa12.75□□□□□ -0.37
SOX2-OT-201ENST00000460739 ZSWIM3Q96MP5 696 aa12.75□□□□□ -0.37
SOX2-OT-201ENST00000460739 ZNF560Q96MR9 790 aa12.75□□□□□ -0.37
SOX2-OT-201ENST00000460739 PYM1Q9BRP8 204 aaKnown RBP12.75□□□□□ -0.37
SOX2-OT-201ENST00000460739 CBWD1Q9BRT8 395 aa12.75□□□□□ -0.37
SOX2-OT-201ENST00000460739 OSBPL6Q9BZF3 934 aa12.75□□□□□ -0.37
SOX2-OT-201ENST00000460739 FOXQ1Q9C009 403 aa12.75□□□□□ -0.37
SOX2-OT-201ENST00000460739 TRIM9Q9C026 710 aa12.75□□□□□ -0.37
SOX2-OT-201ENST00000460739 GPR88Q9GZN0 384 aa12.75□□□□□ -0.37
SOX2-OT-201ENST00000460739 ZCWPW1Q9H0M4 648 aa12.75□□□□□ -0.37
SOX2-OT-201ENST00000460739 TRPV4Q9HBA0 871 aa12.75□□□□□ -0.37
SOX2-OT-201ENST00000460739 ZFP14Q9HCL3 533 aa12.75□□□□□ -0.37
SOX2-OT-201ENST00000460739 RBAKQ9NYW8 714 aaPredicted RBP12.75□□□□□ -0.37
SOX2-OT-201ENST00000460739 SLC27A5Q9Y2P5 690 aa12.75□□□□□ -0.37
SOX2-OT-201ENST00000460739 ASB3Q9Y575 518 aa12.75□□□□□ -0.37
SOX2-OT-201ENST00000460739 FANCMQ8IYD8 2048 aa12.74□□□□□ -0.37
SOX2-OT-201ENST00000460739 WDR87Q6ZQQ6 2873 aa12.74□□□□□ -0.37
SOX2-OT-201ENST00000460739 KIAA0391O15091 583 aaKnown RBP12.74□□□□□ -0.37
SOX2-OT-201ENST00000460739 PRPF6O94906 941 aaKnown RBP12.74□□□□□ -0.37
SOX2-OT-201ENST00000460739 F13A1P00488 732 aa12.74□□□□□ -0.37
SOX2-OT-201ENST00000460739 HSP90AA1P07900 732 aaKnown RBP12.74□□□□□ -0.37
SOX2-OT-201ENST00000460739 GLULP15104 373 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms