RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 SYT12Q8IV01 421 aa4.26□□□□□ -1.73
RFC4-211ENST00000460408 SAMD3Q8N6K7 520 aa4.26□□□□□ -1.73
RFC4-211ENST00000460408 RNF169Q8NCN4 708 aa4.26□□□□□ -1.73
RFC4-211ENST00000460408 NLGN4YQ8NFZ3 816 aaPredicted RBP4.26□□□□□ -1.73
RFC4-211ENST00000460408 APIPQ96GX9 242 aa4.26□□□□□ -1.73
RFC4-211ENST00000460408 TRIM54Q9BYV2 358 aa4.26□□□□□ -1.73
RFC4-211ENST00000460408 BTBD1Q9H0C5 482 aa4.26□□□□□ -1.73
RFC4-211ENST00000460408 NRDE2Q9H7Z3 1164 aa4.26□□□□□ -1.73
RFC4-211ENST00000460408 GNL3LQ9NVN8 582 aaKnown RBP4.26□□□□□ -1.73
RFC4-211ENST00000460408 RLIMQ9NVW2 624 aa4.26□□□□□ -1.73
RFC4-211ENST00000460408 MED16Q9Y2X0 877 aa4.26□□□□□ -1.73
RFC4-211ENST00000460408 USP19O94966 1318 aa4.25□□□□□ -1.73
RFC4-211ENST00000460408 A0A1W2PPL8 197 aa4.25□□□□□ -1.73
RFC4-211ENST00000460408 CDHR4A6H8M9 788 aa4.25□□□□□ -1.73
RFC4-211ENST00000460408 DRGXA6NNA5 263 aa4.25□□□□□ -1.73
RFC4-211ENST00000460408 MFAP3LO75121 409 aa4.25□□□□□ -1.73
RFC4-211ENST00000460408 NBPF7P0C2Y1 421 aaPredicted RBP4.25□□□□□ -1.73
RFC4-211ENST00000460408 KITP10721 976 aa4.25□□□□□ -1.73
RFC4-211ENST00000460408 HDCP19113 662 aa4.25□□□□□ -1.73
RFC4-211ENST00000460408 HK1P19367 917 aa4.25□□□□□ -1.73
RFC4-211ENST00000460408 EN2P19622 333 aaPredicted RBP4.25□□□□□ -1.73
RFC4-211ENST00000460408 SLC6A2P23975 617 aa4.25□□□□□ -1.73
RFC4-211ENST00000460408 ALDH5A1P51649 535 aaPredicted RBP4.25□□□□□ -1.73
RFC4-211ENST00000460408 SOX8P57073 446 aa4.25□□□□□ -1.73
RFC4-211ENST00000460408 EXOSC9Q06265 439 aaKnown RBP4.25□□□□□ -1.73
RFC4-211ENST00000460408 HDAC1Q13547 482 aaPredicted RBP4.25□□□□□ -1.73
RFC4-211ENST00000460408 KHDC1LQ5JSQ8 128 aa4.25□□□□□ -1.73
RFC4-211ENST00000460408 PPP4R4Q6NUP7 873 aa4.25□□□□□ -1.73
RFC4-211ENST00000460408 RHOUQ7L0Q8 258 aa4.25□□□□□ -1.73
RFC4-211ENST00000460408 MB21D1Q8N884 522 aa4.25□□□□□ -1.73
RFC4-211ENST00000460408 OR10H5Q8NGA6 315 aa4.25□□□□□ -1.73
RFC4-211ENST00000460408 GPR150Q8NGU9 434 aa4.25□□□□□ -1.73
RFC4-211ENST00000460408 HAS1Q92839 578 aa4.25□□□□□ -1.73
RFC4-211ENST00000460408 TNPO1Q92973 898 aaKnown RBP4.25□□□□□ -1.73
RFC4-211ENST00000460408 LENG9Q96B70 501 aa4.25□□□□□ -1.73
RFC4-211ENST00000460408 ZNF764Q96H86 408 aaPredicted RBP4.25□□□□□ -1.73
RFC4-211ENST00000460408 STRBPQ96SI9 672 aaKnown RBP4.25□□□□□ -1.73
RFC4-211ENST00000460408 NEU1Q99519 415 aa4.25□□□□□ -1.73
RFC4-211ENST00000460408 APOL5Q9BWW9 433 aa4.25□□□□□ -1.73
RFC4-211ENST00000460408 PACSIN1Q9BY11 444 aa4.25□□□□□ -1.73
RFC4-211ENST00000460408 DPH1Q9BZG8 443 aa4.25□□□□□ -1.73
RFC4-211ENST00000460408 GSTO2Q9H4Y5 243 aa4.25□□□□□ -1.73
RFC4-211ENST00000460408 GPR35Q9HC97 309 aa4.25□□□□□ -1.73
RFC4-211ENST00000460408 SARS2Q9NP81 518 aaKnown RBP4.25□□□□□ -1.73
RFC4-211ENST00000460408 KLHL11Q9NVR0 708 aa4.25□□□□□ -1.73
RFC4-211ENST00000460408 PIH1D1Q9NWS0 290 aaKnown RBP4.25□□□□□ -1.73
RFC4-211ENST00000460408 STK32BQ9NY57 414 aa4.25□□□□□ -1.73
RFC4-211ENST00000460408 TPCN1Q9ULQ1 816 aa4.25□□□□□ -1.73
RFC4-211ENST00000460408 PHTF1Q9UMS5 762 aa4.25□□□□□ -1.73
RFC4-211ENST00000460408 SLC45A2Q9UMX9 530 aa4.25□□□□□ -1.73
RFC4-211ENST00000460408 CLCA2Q9UQC9 943 aa4.25□□□□□ -1.73
RFC4-211ENST00000460408 XDHP47989 1333 aa4.24□□□□□ -1.73
RFC4-211ENST00000460408 ISM1B1AKI9 464 aa4.24□□□□□ -1.73
RFC4-211ENST00000460408 MGEA5O60502 916 aa4.24□□□□□ -1.73
RFC4-211ENST00000460408 PQBP1O60828 265 aaKnown RBP4.24□□□□□ -1.73
RFC4-211ENST00000460408 PEX14O75381 377 aa4.24□□□□□ -1.73
RFC4-211ENST00000460408 PRSS23O95084 383 aa4.24□□□□□ -1.73
RFC4-211ENST00000460408 GJB1P08034 283 aa4.24□□□□□ -1.73
RFC4-211ENST00000460408 GNAI3P08754 354 aa4.24□□□□□ -1.73
RFC4-211ENST00000460408 MGAT1P26572 445 aa4.24□□□□□ -1.73
RFC4-211ENST00000460408 GNAI1P63096 354 aa4.24□□□□□ -1.73
RFC4-211ENST00000460408 MRPS21P82921 87 aaKnown RBP4.24□□□□□ -1.73
RFC4-211ENST00000460408 SLFN5Q08AF3 891 aa4.24□□□□□ -1.73
RFC4-211ENST00000460408 FAM102AQ5T9C2 384 aaPredicted RBP4.24□□□□□ -1.73
RFC4-211ENST00000460408 EFCAB12Q6NXP0 572 aa4.24□□□□□ -1.73
RFC4-211ENST00000460408 TMIEQ8NEW7 156 aa4.24□□□□□ -1.73
RFC4-211ENST00000460408 SLC25A43Q8WUT9 341 aaPredicted RBP4.24□□□□□ -1.73
RFC4-211ENST00000460408 KBTBD7Q8WVZ9 684 aa4.24□□□□□ -1.73
RFC4-211ENST00000460408 ATXN2LQ8WWM7 1075 aaKnown RBP4.24□□□□□ -1.73
RFC4-211ENST00000460408 MAML1Q92585 1016 aa4.24□□□□□ -1.73
RFC4-211ENST00000460408 PMM1Q92871 262 aa4.24□□□□□ -1.73
RFC4-211ENST00000460408 PHKBQ93100 1093 aa4.24□□□□□ -1.73
RFC4-211ENST00000460408 KLHL32Q96NJ5 620 aa4.24□□□□□ -1.73
RFC4-211ENST00000460408 P2RX7Q99572 595 aaKnown RBP4.24□□□□□ -1.73
RFC4-211ENST00000460408 LRRC27Q9C0I9 530 aa4.24□□□□□ -1.73
RFC4-211ENST00000460408 NUP62CLQ9H1M0 184 aa4.24□□□□□ -1.73
RFC4-211ENST00000460408 BRD9Q9H8M2 597 aa4.24□□□□□ -1.73
RFC4-211ENST00000460408 RSAD1Q9HA92 442 aa4.24□□□□□ -1.73
RFC4-211ENST00000460408 SPON1Q9HCB6 807 aa4.24□□□□□ -1.73
RFC4-211ENST00000460408 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.24□□□□□ -1.73
RFC4-211ENST00000460408 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.24□□□□□ -1.73
RFC4-211ENST00000460408 CFAP97Q9P2B7 532 aa4.24□□□□□ -1.73
RFC4-211ENST00000460408 CPA4Q9UI42 421 aa4.24□□□□□ -1.73
RFC4-211ENST00000460408 HDAC5Q9UQL6 1122 aa4.24□□□□□ -1.73
RFC4-211ENST00000460408 GRXCR1A8MXD5 290 aa4.23□□□□□ -1.73
RFC4-211ENST00000460408 E9PLN8 166 aa4.23□□□□□ -1.73
RFC4-211ENST00000460408 LEFTY2O00292 366 aa4.23□□□□□ -1.73
RFC4-211ENST00000460408 DNAJB5O75953 348 aa4.23□□□□□ -1.73
RFC4-211ENST00000460408 AGFG2O95081 481 aa4.23□□□□□ -1.73
RFC4-211ENST00000460408 ABHD16AO95870 558 aa4.23□□□□□ -1.73
RFC4-211ENST00000460408 NUDT3O95989 172 aa4.23□□□□□ -1.73
RFC4-211ENST00000460408 ANXA1P04083 346 aa4.23□□□□□ -1.73
RFC4-211ENST00000460408 ITGB1P05556 798 aa4.23□□□□□ -1.73
RFC4-211ENST00000460408 MYL3P08590 195 aa4.23□□□□□ -1.73
RFC4-211ENST00000460408 RARBP10826 455 aa4.23□□□□□ -1.73
RFC4-211ENST00000460408 RPL17P18621 184 aaKnown RBP4.23□□□□□ -1.73
RFC4-211ENST00000460408 GCSHP23434 173 aa4.23□□□□□ -1.73
RFC4-211ENST00000460408 SLC7A1P30825 629 aa4.23□□□□□ -1.73
RFC4-211ENST00000460408 PIK3CBP42338 1070 aa4.23□□□□□ -1.73
RFC4-211ENST00000460408 PHKA1P46020 1223 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms