RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 POSTNQ15063 836 aa24.66■■□□□ 1.54
PTPN4-207ENST00000460162 FAM78AQ5JUQ0 283 aa24.66■■□□□ 1.54
PTPN4-207ENST00000460162 TANGO2Q6ICL3 276 aa24.66■■□□□ 1.54
PTPN4-207ENST00000460162 HS6ST3Q8IZP7 471 aa24.66■■□□□ 1.54
PTPN4-207ENST00000460162 POMGNT1Q8WZA1 660 aa24.66■■□□□ 1.54
PTPN4-207ENST00000460162 PLA2G2FQ9BZM2 168 aa24.66■■□□□ 1.54
PTPN4-207ENST00000460162 DSEQ9UL01 958 aa24.66■■□□□ 1.54
PTPN4-207ENST00000460162 MTMR11A4FU01 709 aa24.65■■□□□ 1.54
PTPN4-207ENST00000460162 SPTLC1O15269 473 aa24.65■■□□□ 1.54
PTPN4-207ENST00000460162 MOSPD3O75425 235 aa24.65■■□□□ 1.54
PTPN4-207ENST00000460162 MYL4P12829 197 aa24.65■■□□□ 1.54
PTPN4-207ENST00000460162 GLULP15104 373 aa24.65■■□□□ 1.54
PTPN4-207ENST00000460162 STAT6P42226 847 aa24.65■■□□□ 1.54
PTPN4-207ENST00000460162 MAGEA9P43362 315 aa24.65■■□□□ 1.54
PTPN4-207ENST00000460162 ALCAMQ13740 583 aa24.65■■□□□ 1.54
PTPN4-207ENST00000460162 L1TD1Q5T7N2 865 aaKnown RBP24.65■■□□□ 1.54
PTPN4-207ENST00000460162 NT5DC4Q86YG4 428 aa24.65■■□□□ 1.54
PTPN4-207ENST00000460162 C1orf210Q8IVY1 113 aa24.65■■□□□ 1.54
PTPN4-207ENST00000460162 SMARCD2Q92925 531 aa24.65■■□□□ 1.54
PTPN4-207ENST00000460162 CRISPLD1Q9H336 500 aa24.65■■□□□ 1.54
PTPN4-207ENST00000460162 LTB4R2Q9NPC1 389 aa24.65■■□□□ 1.54
PTPN4-207ENST00000460162 HSFX1Q9UBD0 423 aa24.65■■□□□ 1.54
PTPN4-207ENST00000460162 STX6O43752 255 aa24.64■■□□□ 1.54
PTPN4-207ENST00000460162 IL18RAPO95256 599 aa24.64■■□□□ 1.54
PTPN4-207ENST00000460162 ADSSP30520 456 aa24.64■■□□□ 1.54
PTPN4-207ENST00000460162 NASPP49321 788 aaPredicted RBP24.64■■□□□ 1.54
PTPN4-207ENST00000460162 TAF6P49848 677 aa24.64■■□□□ 1.54
PTPN4-207ENST00000460162 EPHB3P54753 998 aa24.64■■□□□ 1.54
PTPN4-207ENST00000460162 DUSP4Q13115 394 aa24.64■■□□□ 1.54
PTPN4-207ENST00000460162 UBXN2BQ14CS0 331 aa24.64■■□□□ 1.54
PTPN4-207ENST00000460162 CENPPQ6IPU0 288 aa24.64■■□□□ 1.54
PTPN4-207ENST00000460162 ARMCX5Q6P1M9 558 aa24.64■■□□□ 1.54
PTPN4-207ENST00000460162 CRELD2Q6UXH1 353 aaPredicted RBP24.64■■□□□ 1.54
PTPN4-207ENST00000460162 TPRG1Q6ZUI0 275 aa24.64■■□□□ 1.54
PTPN4-207ENST00000460162 ACCSQ96QU6 501 aa24.64■■□□□ 1.54
PTPN4-207ENST00000460162 BCO2Q9BYV7 579 aa24.64■■□□□ 1.54
PTPN4-207ENST00000460162 DNAJC25Q9H1X3 360 aa24.64■■□□□ 1.54
PTPN4-207ENST00000460162 IKZF4Q9H2S9 585 aa24.64■■□□□ 1.54
PTPN4-207ENST00000460162 SEMA4AQ9H3S1 761 aa24.64■■□□□ 1.54
PTPN4-207ENST00000460162 NUP210Q8TEM1 1887 aaPredicted RBP24.64■■□□□ 1.53
PTPN4-207ENST00000460162 TICRRQ7Z2Z1 1910 aa24.63■■□□□ 1.53
PTPN4-207ENST00000460162 FRMD3A2A2Y4 597 aa24.63■■□□□ 1.53
PTPN4-207ENST00000460162 NRG2O14511 850 aaPredicted RBP24.63■■□□□ 1.53
PTPN4-207ENST00000460162 LRRN2O75325 713 aa24.63■■□□□ 1.53
PTPN4-207ENST00000460162 GCNT3O95395 438 aa24.63■■□□□ 1.53
PTPN4-207ENST00000460162 ALDH1A3P47895 512 aa24.63■■□□□ 1.53
PTPN4-207ENST00000460162 ZC3H14Q6PJT7 736 aaKnown RBP24.63■■□□□ 1.53
PTPN4-207ENST00000460162 TMC8Q8IU68 726 aa24.63■■□□□ 1.53
PTPN4-207ENST00000460162 EFCAB13Q8IY85 973 aa24.63■■□□□ 1.53
PTPN4-207ENST00000460162 OR10T2Q8NGX3 314 aa24.63■■□□□ 1.53
PTPN4-207ENST00000460162 DEPDC1BQ8WUY9 529 aa24.63■■□□□ 1.53
PTPN4-207ENST00000460162 GPR88Q9GZN0 384 aa24.63■■□□□ 1.53
PTPN4-207ENST00000460162 TRPV4Q9HBA0 871 aa24.63■■□□□ 1.53
PTPN4-207ENST00000460162 DPP3Q9NY33 737 aa24.63■■□□□ 1.53
PTPN4-207ENST00000460162 ASB3Q9Y575 518 aa24.63■■□□□ 1.53
PTPN4-207ENST00000460162 IDEP14735 1019 aa24.62■■□□□ 1.53
PTPN4-207ENST00000460162 KCNA1Q09470 495 aa24.62■■□□□ 1.53
PTPN4-207ENST00000460162 SHKBP1Q8TBC3 707 aa24.62■■□□□ 1.53
PTPN4-207ENST00000460162 ZSCAN18Q8TBC5 510 aaPredicted RBP24.62■■□□□ 1.53
PTPN4-207ENST00000460162 ZNF560Q96MR9 790 aa24.62■■□□□ 1.53
PTPN4-207ENST00000460162 NELL2Q99435 816 aa24.62■■□□□ 1.53
PTPN4-207ENST00000460162 TRMT61BQ9BVS5 477 aaKnown RBP24.62■■□□□ 1.53
PTPN4-207ENST00000460162 LRRC3Q9BY71 257 aa24.62■■□□□ 1.53
PTPN4-207ENST00000460162 BRD9Q9H8M2 597 aa24.62■■□□□ 1.53
PTPN4-207ENST00000460162 TBC1D7Q9P0N9 293 aa24.62■■□□□ 1.53
PTPN4-207ENST00000460162 PCDHB13Q9Y5F0 798 aa24.62■■□□□ 1.53
PTPN4-207ENST00000460162 GVINP1Q7Z2Y8 2422 aa24.62■■□□□ 1.53
PTPN4-207ENST00000460162 CACNA1IQ9P0X4 2223 aa24.61■■□□□ 1.53
PTPN4-207ENST00000460162 PTPRZ1P23471 2315 aaPredicted RBP24.61■■□□□ 1.53
PTPN4-207ENST00000460162 A0A087X0B3 334 aa24.61■■□□□ 1.53
PTPN4-207ENST00000460162 PSMC3P17980 439 aa24.61■■□□□ 1.53
PTPN4-207ENST00000460162 GRM2Q14416 872 aa24.61■■□□□ 1.53
PTPN4-207ENST00000460162 TEAD2Q15562 447 aa24.61■■□□□ 1.53
PTPN4-207ENST00000460162 SV2CQ496J9 727 aa24.61■■□□□ 1.53
PTPN4-207ENST00000460162 VITQ6UXI7 678 aa24.61■■□□□ 1.53
PTPN4-207ENST00000460162 METTL23Q86XA0 190 aa24.61■■□□□ 1.53
PTPN4-207ENST00000460162 BRSK2Q8IWQ3 736 aa24.61■■□□□ 1.53
PTPN4-207ENST00000460162 ATAD1Q8NBU5 361 aa24.61■■□□□ 1.53
PTPN4-207ENST00000460162 IRF7Q92985 503 aa24.61■■□□□ 1.53
PTPN4-207ENST00000460162 E2F7Q96AV8 911 aa24.61■■□□□ 1.53
PTPN4-207ENST00000460162 ZSWIM3Q96MP5 696 aa24.61■■□□□ 1.53
PTPN4-207ENST00000460162 TMEM209Q96SK2 561 aa24.61■■□□□ 1.53
PTPN4-207ENST00000460162 PYM1Q9BRP8 204 aaKnown RBP24.61■■□□□ 1.53
PTPN4-207ENST00000460162 SLITRK6Q9H5Y7 841 aa24.61■■□□□ 1.53
PTPN4-207ENST00000460162 TRPV5Q9NQA5 729 aa24.61■■□□□ 1.53
PTPN4-207ENST00000460162 HEBP1Q9NRV9 189 aa24.61■■□□□ 1.53
PTPN4-207ENST00000460162 FOXD4L1Q9NU39 408 aa24.61■■□□□ 1.53
PTPN4-207ENST00000460162 MRPS17Q9Y2R5 130 aaKnown RBP24.61■■□□□ 1.53
PTPN4-207ENST00000460162 FAM170BA6NMN3 283 aa24.6■■□□□ 1.53
PTPN4-207ENST00000460162 LDHAP00338 332 aaKnown RBP24.6■■□□□ 1.53
PTPN4-207ENST00000460162 SP9P0CG40 484 aa24.6■■□□□ 1.53
PTPN4-207ENST00000460162 GJA1P17302 382 aa24.6■■□□□ 1.53
PTPN4-207ENST00000460162 GARTP22102 1010 aa24.6■■□□□ 1.53
PTPN4-207ENST00000460162 PNPLA4P41247 253 aa24.6■■□□□ 1.53
PTPN4-207ENST00000460162 CASP5P51878 434 aa24.6■■□□□ 1.53
PTPN4-207ENST00000460162 STK38Q15208 465 aa24.6■■□□□ 1.53
PTPN4-207ENST00000460162 ZNF852Q6ZMS4 543 aa24.6■■□□□ 1.53
PTPN4-207ENST00000460162 ITIH5Q86UX2 942 aa24.6■■□□□ 1.53
PTPN4-207ENST00000460162 TTC9BQ8N6N2 239 aa24.6■■□□□ 1.53
PTPN4-207ENST00000460162 LINC00301Q8NCQ3 95 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms