RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 HOXA2O43364 376 aa9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 LSM8O95777 96 aaKnown RBP9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 THP07101 528 aa9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 FAM228BP0C875 321 aa9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 HSPA1AP0DMV8 641 aaKnown RBP9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 HSPA1BP0DMV9 641 aaKnown RBP9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 TNNT1P13805 278 aa9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 AKAP5P24588 427 aa9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 LBX1P52954 281 aa9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 FAM189BP81408 668 aa9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 GFPT1Q06210 699 aaPredicted RBP9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 GRIK3Q13003 919 aa9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 TUBB2AQ13885 445 aa9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 STILQ15468 1287 aa9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 WDR72Q3MJ13 1102 aa9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 SV2CQ496J9 727 aa9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 DNTTIP2Q5QJE6 756 aaKnown RBP9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 CCDC122Q5T0U0 273 aa9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 C9orf57Q5W0N0 161 aa9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 TMEM270Q6UE05 265 aa9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 DPH6Q7L8W6 267 aa9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 ECHDC2Q86YB7 292 aa9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 C17orf53Q8N3J3 647 aaPredicted RBP9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 RBBP8NLQ8NC74 664 aaPredicted RBP9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 TRIM58Q8NG06 486 aa9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 KIF18AQ8NI77 898 aa9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 SPATA18Q8TC71 538 aa9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 KAT5Q92993 513 aa9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 TRIM11Q96F44 468 aa9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 DDX27Q96GQ7 796 aaKnown RBP9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 ZMAT2Q96NC0 199 aaKnown RBP9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 ALS2CR12Q96Q35 445 aa9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 ARID3AQ99856 593 aa9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 ADAM2Q99965 735 aa9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 TUBB2BQ9BVA1 445 aa9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 APOL6Q9BWW8 343 aa9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 HIPK3Q9H422 1215 aa9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 RSAD1Q9HA92 442 aa9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 RRAGDQ9NQL2 400 aaPredicted RBP9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 PRDM10Q9NQV6 1147 aa9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 CISHQ9NSE2 258 aa9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 GDAP2Q9NXN4 497 aa9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 KANSL3Q9P2N6 904 aa9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 KIAA1257Q9ULG3 409 aa9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 HES2Q9Y543 173 aa9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 PAXBP1Q9Y5B6 917 aa9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 PCDHB4Q9Y5E5 795 aa9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 TANC1Q9C0D5 1861 aa9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 CEP350Q5VT06 3117 aa9.52□□□□□ -0.89
CDC42EP3-204ENST00000457889 ARL5CA6NH57 179 aa9.52□□□□□ -0.89
CDC42EP3-204ENST00000457889 C9IYK1 514 aa9.52□□□□□ -0.89
CDC42EP3-204ENST00000457889 PIRO00625 290 aa9.52□□□□□ -0.89
CDC42EP3-204ENST00000457889 PTGESO14684 152 aa9.52□□□□□ -0.89
CDC42EP3-204ENST00000457889 ZNF263O14978 683 aa9.52□□□□□ -0.89
CDC42EP3-204ENST00000457889 MED7O43513 233 aa9.52□□□□□ -0.89
CDC42EP3-204ENST00000457889 PQBP1O60828 265 aaKnown RBP9.52□□□□□ -0.89
CDC42EP3-204ENST00000457889 CXCL10P02778 98 aa9.52□□□□□ -0.89
CDC42EP3-204ENST00000457889 H2AFZP0C0S5 128 aa9.52□□□□□ -0.89
CDC42EP3-204ENST00000457889 MYBL1P10243 752 aa9.52□□□□□ -0.89
CDC42EP3-204ENST00000457889 ARHGAP25P42331 645 aa9.52□□□□□ -0.89
CDC42EP3-204ENST00000457889 TAF6P49848 677 aa9.52□□□□□ -0.89
CDC42EP3-204ENST00000457889 CYP27A1Q02318 531 aa9.52□□□□□ -0.89
CDC42EP3-204ENST00000457889 MBTPS1Q14703 1052 aa9.52□□□□□ -0.89
CDC42EP3-204ENST00000457889 TCEAL1Q15170 157 aa9.52□□□□□ -0.89
CDC42EP3-204ENST00000457889 PLEKHG4Q58EX7 1191 aa9.52□□□□□ -0.89
CDC42EP3-204ENST00000457889 PPP1R15BQ5SWA1 713 aa9.52□□□□□ -0.89
CDC42EP3-204ENST00000457889 SPOPLQ6IQ16 392 aa9.52□□□□□ -0.89
CDC42EP3-204ENST00000457889 GLB1LQ6UWU2 654 aa9.52□□□□□ -0.89
CDC42EP3-204ENST00000457889 H2AFVQ71UI9 128 aa9.52□□□□□ -0.89
CDC42EP3-204ENST00000457889 NOP9Q86U38 636 aaKnown RBP9.52□□□□□ -0.89
CDC42EP3-204ENST00000457889 ZNF598Q86UK7 904 aaKnown RBP9.52□□□□□ -0.89
CDC42EP3-204ENST00000457889 UNC93AQ86WB7 457 aa9.52□□□□□ -0.89
CDC42EP3-204ENST00000457889 GLYCTKQ8IVS8 523 aa9.52□□□□□ -0.89
CDC42EP3-204ENST00000457889 CTNNBL1Q8WYA6 563 aaPredicted RBP9.52□□□□□ -0.89
CDC42EP3-204ENST00000457889 DDX1Q92499 740 aaKnown RBP9.52□□□□□ -0.89
CDC42EP3-204ENST00000457889 SECISBP2LQ93073 1101 aaKnown RBP9.52□□□□□ -0.89
CDC42EP3-204ENST00000457889 NOX5Q96PH1 765 aa9.52□□□□□ -0.89
CDC42EP3-204ENST00000457889 ZNF518BQ9C0D4 1074 aa9.52□□□□□ -0.89
CDC42EP3-204ENST00000457889 ISCUQ9H1K1 167 aa9.52□□□□□ -0.89
CDC42EP3-204ENST00000457889 C11orf49Q9H6J7 331 aa9.52□□□□□ -0.89
CDC42EP3-204ENST00000457889 LZTFL1Q9NQ48 299 aa9.52□□□□□ -0.89
CDC42EP3-204ENST00000457889 TMEM161AQ9NX61 479 aa9.52□□□□□ -0.89
CDC42EP3-204ENST00000457889 TBX21Q9UL17 535 aa9.52□□□□□ -0.89
CDC42EP3-204ENST00000457889 BARX2Q9UMQ3 279 aaPredicted RBP9.52□□□□□ -0.89
CDC42EP3-204ENST00000457889 CEP83Q9Y592 693 aa9.52□□□□□ -0.89
CDC42EP3-204ENST00000457889 CARNS1A5YM72 827 aa9.51□□□□□ -0.89
CDC42EP3-204ENST00000457889 ANKRD62A6NC57 917 aa9.51□□□□□ -0.89
CDC42EP3-204ENST00000457889 MGEA5O60502 916 aa9.51□□□□□ -0.89
CDC42EP3-204ENST00000457889 EFCAB14O75071 495 aa9.51□□□□□ -0.89
CDC42EP3-204ENST00000457889 RTN2O75298 545 aa9.51□□□□□ -0.89
CDC42EP3-204ENST00000457889 CILPO75339 1184 aa9.51□□□□□ -0.89
CDC42EP3-204ENST00000457889 TACC1O75410 805 aa9.51□□□□□ -0.89
CDC42EP3-204ENST00000457889 TMEM253P0C7T8 217 aa9.51□□□□□ -0.89
CDC42EP3-204ENST00000457889 PNMA6AP0CW24 399 aaPredicted RBP9.51□□□□□ -0.89
CDC42EP3-204ENST00000457889 GNA15P30679 374 aa9.51□□□□□ -0.89
CDC42EP3-204ENST00000457889 MLH1P40692 756 aa9.51□□□□□ -0.89
CDC42EP3-204ENST00000457889 GNG11P61952 73 aa9.51□□□□□ -0.89
CDC42EP3-204ENST00000457889 TLE2Q04725 743 aa9.51□□□□□ -0.89
CDC42EP3-204ENST00000457889 FAAP100Q0VG06 881 aa9.51□□□□□ -0.89
CDC42EP3-204ENST00000457889 AGMOQ6ZNB7 445 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms