RNA–Protein interactions for RNA: ENST00000457356.8

MSC-AS1-201, MSC antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene MSC-AS1, Length 4,220 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-201ENST00000457356 GLI1P08151 1106 aa10.25□□□□□ -0.77
MSC-AS1-201ENST00000457356 NQO1P15559 274 aaKnown RBP10.25□□□□□ -0.77
MSC-AS1-201ENST00000457356 NMT1P30419 496 aaKnown RBP10.25□□□□□ -0.77
MSC-AS1-201ENST00000457356 VAMP7P51809 220 aa10.25□□□□□ -0.77
MSC-AS1-201ENST00000457356 RHBDL3P58872 404 aa10.25□□□□□ -0.77
MSC-AS1-201ENST00000457356 RCN1Q15293 331 aa10.25□□□□□ -0.77
MSC-AS1-201ENST00000457356 HIF1AQ16665 826 aa10.25□□□□□ -0.77
MSC-AS1-201ENST00000457356 CCDC92Q53HC0 331 aaPredicted RBP10.25□□□□□ -0.77
MSC-AS1-201ENST00000457356 RNF135Q8IUD6 432 aa10.25□□□□□ -0.77
MSC-AS1-201ENST00000457356 NAF1Q96HR8 494 aaKnown RBP10.25□□□□□ -0.77
MSC-AS1-201ENST00000457356 ZNF668Q96K58 619 aaPredicted RBP10.25□□□□□ -0.77
MSC-AS1-201ENST00000457356 RANBP17Q9H2T7 1088 aaKnown RBP10.25□□□□□ -0.77
MSC-AS1-201ENST00000457356 METTL5Q9NRN9 209 aaKnown RBP10.25□□□□□ -0.77
MSC-AS1-201ENST00000457356 SLC9A2Q9UBY0 812 aa10.25□□□□□ -0.77
MSC-AS1-201ENST00000457356 MYPNQ86TC9 1320 aa10.25□□□□□ -0.77
MSC-AS1-201ENST00000457356 PITPNM2Q9BZ72 1349 aa10.25□□□□□ -0.77
MSC-AS1-201ENST00000457356 NEMP1O14524 444 aa10.25□□□□□ -0.77
MSC-AS1-201ENST00000457356 ERVK-9P63128 1117 aa10.25□□□□□ -0.77
MSC-AS1-201ENST00000457356 SLC44A4Q53GD3 710 aa10.25□□□□□ -0.77
MSC-AS1-201ENST00000457356 TWF2Q6IBS0 349 aaKnown RBP10.25□□□□□ -0.77
MSC-AS1-201ENST00000457356 CATSPER3Q86XQ3 398 aa10.25□□□□□ -0.77
MSC-AS1-201ENST00000457356 FBXL13Q8NEE6 735 aa10.25□□□□□ -0.77
MSC-AS1-201ENST00000457356 SOCS4Q8WXH5 440 aa10.25□□□□□ -0.77
MSC-AS1-201ENST00000457356 EME1Q96AY2 570 aa10.25□□□□□ -0.77
MSC-AS1-201ENST00000457356 FAM213AQ9BRX8 229 aa10.25□□□□□ -0.77
MSC-AS1-201ENST00000457356 INTS2Q9H0H0 1204 aaKnown RBP10.25□□□□□ -0.77
MSC-AS1-201ENST00000457356 MID2Q9UJV3 735 aa10.25□□□□□ -0.77
MSC-AS1-201ENST00000457356 CHMP2BQ9UQN3 213 aa10.25□□□□□ -0.77
MSC-AS1-201ENST00000457356 VIRMAQ69YN4 1812 aaKnown RBP10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 OPLAHO14841 1288 aa10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 AIM2O14862 343 aa10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 JAK3P52333 1124 aa10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 ANTXR2P58335 489 aa10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 MRPS15P82914 257 aaKnown RBP10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 FSTL1Q12841 308 aa10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 USP4Q13107 963 aa10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 CYLC2Q14093 348 aaPredicted RBP10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 TFDP2Q14188 446 aa10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 NAALADL2Q58DX5 795 aa10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 SPRYD7Q5W111 196 aa10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 DNAAF5Q86Y56 855 aa10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 REM2Q8IYK8 340 aaPredicted RBP10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 FBXO25Q8TCJ0 367 aa10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 ZNF507Q8TCN5 953 aa10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 INPP5DQ92835 1189 aa10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 ANKRD36BP1Q96IX9 119 aa10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 VPS39Q96JC1 886 aa10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 ZNF302Q9NR11 478 aa10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 RGL1Q9NZL6 768 aa10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 SCHIP1Q9P0W5 487 aaPredicted RBP10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 GABBR1Q9UBS5 961 aa10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 STRIP2Q9ULQ0 834 aa10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 MYMKA6NI61 221 aa10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 RHOBTB3O94955 611 aa10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 HTRA3P83110 453 aa10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 SKOR1P84550 965 aa10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 P3H1Q32P28 736 aa10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 CEP55Q53EZ4 464 aa10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 PADI6Q6TGC4 694 aa10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 TTC13Q8NBP0 860 aa10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 ZNF784Q8NCA9 323 aaPredicted RBP10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 KCNB2Q92953 911 aa10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 AGPAT1Q99943 283 aa10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 KATNAL1Q9BW62 490 aa10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 SH3GLB2Q9NR46 395 aa10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 SUN2Q9UH99 717 aa10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 TSC22D4Q9Y3Q8 395 aa10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 NEU2Q9Y3R4 380 aa10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 DSG3P32926 999 aa10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 ZCWPW2Q504Y3 356 aa10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 TAF1BQ53T94 588 aaPredicted RBP10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 LMBRD2Q68DH5 695 aaPredicted RBP10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 LVRNQ6Q4G3 990 aa10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 SLC51AQ86UW1 340 aa10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 SNX25Q9H3E2 840 aa10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 LRRC4Q9HBW1 653 aa10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 SENP1Q9P0U3 644 aa10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 KLHL8Q9P2G9 620 aaPredicted RBP10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 DDX20Q9UHI6 824 aaKnown RBP10.24□□□□□ -0.77
MSC-AS1-201ENST00000457356 GLI3P10071 1580 aa10.23□□□□□ -0.77
MSC-AS1-201ENST00000457356 KLRG2A4D1S0 409 aaPredicted RBP10.23□□□□□ -0.77
MSC-AS1-201ENST00000457356 SPDYE5A6NIY4 337 aa10.23□□□□□ -0.77
MSC-AS1-201ENST00000457356 CA12O43570 354 aa10.23□□□□□ -0.77
MSC-AS1-201ENST00000457356 AOC2O75106 756 aa10.23□□□□□ -0.77
MSC-AS1-201ENST00000457356 STAT5BP51692 787 aa10.23□□□□□ -0.77
MSC-AS1-201ENST00000457356 BCAR1P56945 870 aa10.23□□□□□ -0.77
MSC-AS1-201ENST00000457356 YWHAHQ04917 246 aaPredicted RBP10.23□□□□□ -0.77
MSC-AS1-201ENST00000457356 AP1B1Q10567 949 aa10.23□□□□□ -0.77
MSC-AS1-201ENST00000457356 NAB2Q15742 525 aa10.23□□□□□ -0.77
MSC-AS1-201ENST00000457356 PPP1R18Q6NYC8 613 aa10.23□□□□□ -0.77
MSC-AS1-201ENST00000457356 ARL10Q8N8L6 244 aa10.23□□□□□ -0.77
MSC-AS1-201ENST00000457356 EPS8L3Q8TE67 593 aaKnown RBP10.23□□□□□ -0.77
MSC-AS1-201ENST00000457356 STARD7Q9NQZ5 370 aa10.23□□□□□ -0.77
MSC-AS1-201ENST00000457356 ABCF3Q9NUQ8 709 aa10.23□□□□□ -0.77
MSC-AS1-201ENST00000457356 BARHL2Q9NY43 387 aa10.23□□□□□ -0.77
MSC-AS1-201ENST00000457356 ZFATQ9P243 1243 aa10.23□□□□□ -0.77
MSC-AS1-201ENST00000457356 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.23□□□□□ -0.77
MSC-AS1-201ENST00000457356 TOPAZ1Q8N9V7 1692 aa10.23□□□□□ -0.77
MSC-AS1-201ENST00000457356 ICAM1P05362 532 aa10.23□□□□□ -0.77
MSC-AS1-201ENST00000457356 ITIH2P19823 946 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms