RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 PRSS55Q6UWB4 352 aaPredicted RBP10.84□□□□□ -0.67
ATG4A-206ENST00000457035 CEP57Q86XR8 500 aa10.84□□□□□ -0.67
ATG4A-206ENST00000457035 RIN2Q8WYP3 895 aaPredicted RBP10.84□□□□□ -0.67
ATG4A-206ENST00000457035 PIK3R5Q8WYR1 880 aa10.84□□□□□ -0.67
ATG4A-206ENST00000457035 SENP8Q96LD8 212 aa10.84□□□□□ -0.67
ATG4A-206ENST00000457035 CEP63Q96MT8 703 aa10.84□□□□□ -0.67
ATG4A-206ENST00000457035 KLHL5Q96PQ7 755 aa10.84□□□□□ -0.67
ATG4A-206ENST00000457035 CLSTN3Q9BQT9 956 aa10.84□□□□□ -0.67
ATG4A-206ENST00000457035 SRRTQ9BXP5 876 aaKnown RBP10.84□□□□□ -0.67
ATG4A-206ENST00000457035 TLE6Q9H808 572 aa10.84□□□□□ -0.67
ATG4A-206ENST00000457035 FNIP2Q9P278 1114 aa10.84□□□□□ -0.67
ATG4A-206ENST00000457035 SSX2IPQ9Y2D8 614 aa10.84□□□□□ -0.67
ATG4A-206ENST00000457035 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.83□□□□□ -0.68
ATG4A-206ENST00000457035 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.83□□□□□ -0.68
ATG4A-206ENST00000457035 KPNA7A9QM74 516 aa10.83□□□□□ -0.68
ATG4A-206ENST00000457035 SLC16A3O15427 465 aaKnown RBP10.83□□□□□ -0.68
ATG4A-206ENST00000457035 TEX28O15482 410 aa10.83□□□□□ -0.68
ATG4A-206ENST00000457035 NCK2O43639 380 aa10.83□□□□□ -0.68
ATG4A-206ENST00000457035 URODP06132 367 aa10.83□□□□□ -0.68
ATG4A-206ENST00000457035 KRT19P08727 400 aa10.83□□□□□ -0.68
ATG4A-206ENST00000457035 EPB41P11171 864 aaKnown RBP10.83□□□□□ -0.68
ATG4A-206ENST00000457035 BMP1P13497 986 aa10.83□□□□□ -0.68
ATG4A-206ENST00000457035 KRT13P13646 458 aa10.83□□□□□ -0.68
ATG4A-206ENST00000457035 PTMSP20962 102 aa10.83□□□□□ -0.68
ATG4A-206ENST00000457035 ERCC5P28715 1186 aaPredicted RBP10.83□□□□□ -0.68
ATG4A-206ENST00000457035 LTBRP36941 435 aa10.83□□□□□ -0.68
ATG4A-206ENST00000457035 AP3M2P53677 418 aa10.83□□□□□ -0.68
ATG4A-206ENST00000457035 PPP3CAQ08209 521 aa10.83□□□□□ -0.68
ATG4A-206ENST00000457035 BFSP1Q12934 665 aa10.83□□□□□ -0.68
ATG4A-206ENST00000457035 ZACNQ401N2 412 aa10.83□□□□□ -0.68
ATG4A-206ENST00000457035 TDRD10Q5VZ19 366 aaKnown RBP10.83□□□□□ -0.68
ATG4A-206ENST00000457035 CAVIN1Q6NZI2 390 aaKnown RBP10.83□□□□□ -0.68
ATG4A-206ENST00000457035 RSPO2Q6UXX9 243 aaPredicted RBP10.83□□□□□ -0.68
ATG4A-206ENST00000457035 C15orf39Q6ZRI6 1047 aa10.83□□□□□ -0.68
ATG4A-206ENST00000457035 SV2AQ7L0J3 742 aa10.83□□□□□ -0.68
ATG4A-206ENST00000457035 FRMD5Q7Z6J6 570 aa10.83□□□□□ -0.68
ATG4A-206ENST00000457035 LRRC52Q8N7C0 313 aa10.83□□□□□ -0.68
ATG4A-206ENST00000457035 EFHBQ8N7U6 833 aa10.83□□□□□ -0.68
ATG4A-206ENST00000457035 SLC22A17Q8WUG5 538 aa10.83□□□□□ -0.68
ATG4A-206ENST00000457035 PPP2R3CQ969Q6 453 aa10.83□□□□□ -0.68
ATG4A-206ENST00000457035 CDCA3Q99618 268 aaPredicted RBP10.83□□□□□ -0.68
ATG4A-206ENST00000457035 IGFLR1Q9H665 355 aa10.83□□□□□ -0.68
ATG4A-206ENST00000457035 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.83□□□□□ -0.68
ATG4A-206ENST00000457035 GDAP2Q9NXN4 497 aa10.83□□□□□ -0.68
ATG4A-206ENST00000457035 LHX6Q9UPM6 363 aa10.83□□□□□ -0.68
ATG4A-206ENST00000457035 TIMM13Q9Y5L4 95 aaPredicted RBP10.83□□□□□ -0.68
ATG4A-206ENST00000457035 C5orf42Q9H799 3197 aa10.83□□□□□ -0.68
ATG4A-206ENST00000457035 MUC3AQ02505 3323 aa10.82□□□□□ -0.68
ATG4A-206ENST00000457035 MYO10Q9HD67 2058 aa10.82□□□□□ -0.68
ATG4A-206ENST00000457035 CYB561D2O14569 222 aa10.82□□□□□ -0.68
ATG4A-206ENST00000457035 LINC01565O15544 149 aa10.82□□□□□ -0.68
ATG4A-206ENST00000457035 OAZ2O95190 189 aa10.82□□□□□ -0.68
ATG4A-206ENST00000457035 VNN1O95497 513 aa10.82□□□□□ -0.68
ATG4A-206ENST00000457035 CYP11A1P05108 521 aa10.82□□□□□ -0.68
ATG4A-206ENST00000457035 TRIM49P0CI25 452 aa10.82□□□□□ -0.68
ATG4A-206ENST00000457035 TRIM49CP0CI26 452 aa10.82□□□□□ -0.68
ATG4A-206ENST00000457035 RPL17P18621 184 aaKnown RBP10.82□□□□□ -0.68
ATG4A-206ENST00000457035 TYMPP19971 482 aa10.82□□□□□ -0.68
ATG4A-206ENST00000457035 PNPLA4P41247 253 aa10.82□□□□□ -0.68
ATG4A-206ENST00000457035 RBM10P98175 930 aaKnown RBP10.82□□□□□ -0.68
ATG4A-206ENST00000457035 PSMD5Q16401 504 aa10.82□□□□□ -0.68
ATG4A-206ENST00000457035 PDXDC1Q6P996 788 aa10.82□□□□□ -0.68
ATG4A-206ENST00000457035 LILRA6Q6PI73 481 aa10.82□□□□□ -0.68
ATG4A-206ENST00000457035 SASS6Q6UVJ0 657 aa10.82□□□□□ -0.68
ATG4A-206ENST00000457035 DSTYKQ6XUX3 929 aa10.82□□□□□ -0.68
ATG4A-206ENST00000457035 TMEM184AQ6ZMB5 413 aa10.82□□□□□ -0.68
ATG4A-206ENST00000457035 ANKS3Q6ZW76 656 aa10.82□□□□□ -0.68
ATG4A-206ENST00000457035 LIMS2Q7Z4I7 341 aa10.82□□□□□ -0.68
ATG4A-206ENST00000457035 USP37Q86T82 979 aa10.82□□□□□ -0.68
ATG4A-206ENST00000457035 IRF2BP1Q8IU81 584 aa10.82□□□□□ -0.68
ATG4A-206ENST00000457035 APPL2Q8NEU8 664 aa10.82□□□□□ -0.68
ATG4A-206ENST00000457035 VN1R2Q8NFZ6 395 aa10.82□□□□□ -0.68
ATG4A-206ENST00000457035 PABPC5Q96DU9 382 aaKnown RBP10.82□□□□□ -0.68
ATG4A-206ENST00000457035 HPDLQ96IR7 371 aa10.82□□□□□ -0.68
ATG4A-206ENST00000457035 ZNF560Q96MR9 790 aa10.82□□□□□ -0.68
ATG4A-206ENST00000457035 EMILIN2Q9BXX0 1053 aa10.82□□□□□ -0.68
ATG4A-206ENST00000457035 XYLT2Q9H1B5 865 aa10.82□□□□□ -0.68
ATG4A-206ENST00000457035 METTL14Q9HCE5 456 aaKnown RBP10.82□□□□□ -0.68
ATG4A-206ENST00000457035 MTRRQ9UBK8 725 aa10.82□□□□□ -0.68
ATG4A-206ENST00000457035 BACE2Q9Y5Z0 518 aa10.82□□□□□ -0.68
ATG4A-206ENST00000457035 ADAM12O43184 909 aa10.81□□□□□ -0.68
ATG4A-206ENST00000457035 STAU1O95793 577 aaKnown RBP10.81□□□□□ -0.68
ATG4A-206ENST00000457035 GLP2RO95838 553 aa10.81□□□□□ -0.68
ATG4A-206ENST00000457035 C1RP00736 705 aa10.81□□□□□ -0.68
ATG4A-206ENST00000457035 KLRC2P26717 231 aa10.81□□□□□ -0.68
ATG4A-206ENST00000457035 GTF2H1P32780 548 aa10.81□□□□□ -0.68
ATG4A-206ENST00000457035 CA8P35219 290 aa10.81□□□□□ -0.68
ATG4A-206ENST00000457035 GCLMP48507 274 aa10.81□□□□□ -0.68
ATG4A-206ENST00000457035 CLCN4P51793 760 aa10.81□□□□□ -0.68
ATG4A-206ENST00000457035 MARSP56192 900 aaKnown RBP10.81□□□□□ -0.68
ATG4A-206ENST00000457035 MYL6P60660 151 aa10.81□□□□□ -0.68
ATG4A-206ENST00000457035 DLX2Q07687 328 aaPredicted RBP10.81□□□□□ -0.68
ATG4A-206ENST00000457035 MYO1EQ12965 1108 aa10.81□□□□□ -0.68
ATG4A-206ENST00000457035 NFKBIBQ15653 356 aa10.81□□□□□ -0.68
ATG4A-206ENST00000457035 SKOR2Q2VWA4 1001 aaPredicted RBP10.81□□□□□ -0.68
ATG4A-206ENST00000457035 SV2CQ496J9 727 aa10.81□□□□□ -0.68
ATG4A-206ENST00000457035 WSCD1Q658N2 575 aa10.81□□□□□ -0.68
ATG4A-206ENST00000457035 HLA-CQ95604 372 aa10.81□□□□□ -0.68
ATG4A-206ENST00000457035 SLC35C1Q96A29 364 aa10.81□□□□□ -0.68
ATG4A-206ENST00000457035 SYAP1Q96A49 352 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms