RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 MRRFQ96E11 262 aaKnown RBP13.2□□□□□ -0.3
LINC00959-201ENST00000456581 C17orf75Q9HAS0 396 aa13.2□□□□□ -0.3
LINC00959-201ENST00000456581 RAB20Q9NX57 234 aa13.2□□□□□ -0.3
LINC00959-201ENST00000456581 KCNH4Q9UQ05 1017 aa13.2□□□□□ -0.3
LINC00959-201ENST00000456581 CXCL11O14625 94 aa13.19□□□□□ -0.3
LINC00959-201ENST00000456581 ARL2P36404 184 aa13.19□□□□□ -0.3
LINC00959-201ENST00000456581 NCALDP61601 193 aa13.19□□□□□ -0.3
LINC00959-201ENST00000456581 ANKS1BQ7Z6G8 1248 aa13.19□□□□□ -0.3
LINC00959-201ENST00000456581 C3orf20Q8ND61 904 aa13.19□□□□□ -0.3
LINC00959-201ENST00000456581 FBXL13Q8NEE6 735 aa13.19□□□□□ -0.3
LINC00959-201ENST00000456581 TMEM174Q8WUU8 243 aa13.19□□□□□ -0.3
LINC00959-201ENST00000456581 PRPF31Q8WWY3 499 aaKnown RBP13.19□□□□□ -0.3
LINC00959-201ENST00000456581 MIEF2Q96C03 454 aa13.19□□□□□ -0.3
LINC00959-201ENST00000456581 C9orf72Q96LT7 481 aa13.19□□□□□ -0.3
LINC00959-201ENST00000456581 PPP1R16BQ96T49 567 aa13.19□□□□□ -0.3
LINC00959-201ENST00000456581 TMEM8AQ9HCN3 771 aa13.19□□□□□ -0.3
LINC00959-201ENST00000456581 LOC285556D6RIA3 1793 aa13.19□□□□□ -0.3
LINC00959-201ENST00000456581 IGF2BP3O00425 579 aaKnown RBP eCLIP13.19□□□□□ -0.3
LINC00959-201ENST00000456581 RTN2O75298 545 aa13.19□□□□□ -0.3
LINC00959-201ENST00000456581 CSDE1O75534 798 aaKnown RBP13.19□□□□□ -0.3
LINC00959-201ENST00000456581 ECEL1O95672 775 aa13.19□□□□□ -0.3
LINC00959-201ENST00000456581 AGTP01019 485 aa13.19□□□□□ -0.3
LINC00959-201ENST00000456581 KRT5P13647 590 aa13.19□□□□□ -0.3
LINC00959-201ENST00000456581 CYP11B1P15538 503 aa13.19□□□□□ -0.3
LINC00959-201ENST00000456581 TNNI1P19237 187 aa13.19□□□□□ -0.3
LINC00959-201ENST00000456581 CLNS1AP54105 237 aaKnown RBP13.19□□□□□ -0.3
LINC00959-201ENST00000456581 ADCY2Q08462 1091 aa13.19□□□□□ -0.3
LINC00959-201ENST00000456581 MTM1Q13496 603 aa13.19□□□□□ -0.3
LINC00959-201ENST00000456581 NAA25Q14CX7 972 aa13.19□□□□□ -0.3
LINC00959-201ENST00000456581 TARBP2Q15633 366 aaKnown RBP13.19□□□□□ -0.3
LINC00959-201ENST00000456581 SGO2Q562F6 1265 aa13.19□□□□□ -0.3
LINC00959-201ENST00000456581 C6orf118Q5T5N4 469 aa13.19□□□□□ -0.3
LINC00959-201ENST00000456581 CGB2Q6NT52 195 aa13.19□□□□□ -0.3
LINC00959-201ENST00000456581 ZBTB33Q86T24 672 aa13.19□□□□□ -0.3
LINC00959-201ENST00000456581 SEPT1Q8WYJ6 367 aa13.19□□□□□ -0.3
LINC00959-201ENST00000456581 CENPTQ96BT3 561 aa13.19□□□□□ -0.3
LINC00959-201ENST00000456581 MMP19Q99542 508 aa13.19□□□□□ -0.3
LINC00959-201ENST00000456581 AGO2Q9UKV8 859 aaKnown RBP13.19□□□□□ -0.3
LINC00959-201ENST00000456581 A0A0G2JMZ2 1700 aa13.18□□□□□ -0.3
LINC00959-201ENST00000456581 SNX3O60493 162 aa13.18□□□□□ -0.3
LINC00959-201ENST00000456581 DNAJC8O75937 253 aaPredicted RBP13.18□□□□□ -0.3
LINC00959-201ENST00000456581 RARGP13631 454 aa13.18□□□□□ -0.3
LINC00959-201ENST00000456581 TNFSF9P41273 254 aa13.18□□□□□ -0.3
LINC00959-201ENST00000456581 ITGA8P53708 1063 aa13.18□□□□□ -0.3
LINC00959-201ENST00000456581 STRN3Q13033 797 aa13.18□□□□□ -0.3
LINC00959-201ENST00000456581 PPIL2Q13356 520 aa13.18□□□□□ -0.3
LINC00959-201ENST00000456581 KCTD2Q14681 263 aa13.18□□□□□ -0.3
LINC00959-201ENST00000456581 METTL7BQ6UX53 244 aa13.18□□□□□ -0.3
LINC00959-201ENST00000456581 FAM47EQ6ZV65 393 aa13.18□□□□□ -0.3
LINC00959-201ENST00000456581 PASD1Q8IV76 773 aa13.18□□□□□ -0.3
LINC00959-201ENST00000456581 FAM71AQ8IYT1 594 aa13.18□□□□□ -0.3
LINC00959-201ENST00000456581 FITM2Q8N6M3 262 aa13.18□□□□□ -0.3
LINC00959-201ENST00000456581 ANAPC7Q9UJX3 599 aa13.18□□□□□ -0.3
LINC00959-201ENST00000456581 CLEC11AQ9Y240 323 aa13.18□□□□□ -0.3
LINC00959-201ENST00000456581 DIS3Q9Y2L1 958 aaKnown RBP13.18□□□□□ -0.3
LINC00959-201ENST00000456581 MAPK13O15264 365 aa13.18□□□□□ -0.3
LINC00959-201ENST00000456581 P4HA2O15460 535 aa13.18□□□□□ -0.3
LINC00959-201ENST00000456581 ASAP2O43150 1006 aa13.18□□□□□ -0.3
LINC00959-201ENST00000456581 ANP32DO95626 131 aa13.18□□□□□ -0.3
LINC00959-201ENST00000456581 ERICH1Q86X53 443 aa13.18□□□□□ -0.3
LINC00959-201ENST00000456581 SRRM1Q8IYB3 904 aaKnown RBP13.18□□□□□ -0.3
LINC00959-201ENST00000456581 PSPC1Q8WXF1 523 aaKnown RBP13.18□□□□□ -0.3
LINC00959-201ENST00000456581 SHC3Q92529 594 aa13.18□□□□□ -0.3
LINC00959-201ENST00000456581 GPR20Q99678 358 aa13.18□□□□□ -0.3
LINC00959-201ENST00000456581 PAIP2Q9BPZ3 127 aaKnown RBP13.18□□□□□ -0.3
LINC00959-201ENST00000456581 NIFKQ9BYG3 293 aaKnown RBP13.18□□□□□ -0.3
LINC00959-201ENST00000456581 MIF4GDA9UHW6 222 aaKnown RBP13.17□□□□□ -0.3
LINC00959-201ENST00000456581 ZBTB42B2RXF5 422 aa13.17□□□□□ -0.3
LINC00959-201ENST00000456581 NOP56O00567 594 aaKnown RBP13.17□□□□□ -0.3
LINC00959-201ENST00000456581 PSMC4P43686 418 aa13.17□□□□□ -0.3
LINC00959-201ENST00000456581 DRG2P55039 364 aaKnown RBP13.17□□□□□ -0.3
LINC00959-201ENST00000456581 RTP1P59025 263 aa13.17□□□□□ -0.3
LINC00959-201ENST00000456581 CALCOCO2Q13137 446 aa13.17□□□□□ -0.3
LINC00959-201ENST00000456581 TDRD10Q5VZ19 366 aaKnown RBP13.17□□□□□ -0.3
LINC00959-201ENST00000456581 OR5B17Q8NGF7 314 aa13.17□□□□□ -0.3
LINC00959-201ENST00000456581 PPP1R13LQ8WUF5 828 aa13.17□□□□□ -0.3
LINC00959-201ENST00000456581 SPATA33Q96N06 139 aa13.17□□□□□ -0.3
LINC00959-201ENST00000456581 NT5C1BQ96P26 610 aa13.17□□□□□ -0.3
LINC00959-201ENST00000456581 ECT2Q9H8V3 914 aa13.17□□□□□ -0.3
LINC00959-201ENST00000456581 KIF9Q9HAQ2 790 aa13.17□□□□□ -0.3
LINC00959-201ENST00000456581 COQ4Q9Y3A0 265 aa13.17□□□□□ -0.3
LINC00959-201ENST00000456581 UMODL1Q5DID0 1318 aa13.17□□□□□ -0.3
LINC00959-201ENST00000456581 PASKQ96RG2 1323 aa13.17□□□□□ -0.3
LINC00959-201ENST00000456581 PODXLO00592 558 aa13.17□□□□□ -0.3
LINC00959-201ENST00000456581 DIAPH2O60879 1101 aa13.17□□□□□ -0.3
LINC00959-201ENST00000456581 GARTP22102 1010 aa13.17□□□□□ -0.3
LINC00959-201ENST00000456581 GPC3P51654 580 aa13.17□□□□□ -0.3
LINC00959-201ENST00000456581 SNRPFP62306 86 aaKnown RBP13.17□□□□□ -0.3
LINC00959-201ENST00000456581 CYP4F22Q6NT55 531 aa13.17□□□□□ -0.3
LINC00959-201ENST00000456581 USP50Q70EL3 339 aaPredicted RBP13.17□□□□□ -0.3
LINC00959-201ENST00000456581 GLIS1Q8NBF1 620 aa13.17□□□□□ -0.3
LINC00959-201ENST00000456581 TMC2Q8TDI7 906 aa13.17□□□□□ -0.3
LINC00959-201ENST00000456581 ZNF570Q96NI8 536 aa13.17□□□□□ -0.3
LINC00959-201ENST00000456581 MSTO1Q9BUK6 570 aa13.17□□□□□ -0.3
LINC00959-201ENST00000456581 DONSONQ9NYP3 566 aa13.17□□□□□ -0.3
LINC00959-201ENST00000456581 ATP8B3O60423 1300 aa13.17□□□□□ -0.3
LINC00959-201ENST00000456581 DNAJC25-GNG10A0A024R161 153 aa13.17□□□□□ -0.3
LINC00959-201ENST00000456581 EXTL3O43909 919 aa13.17□□□□□ -0.3
LINC00959-201ENST00000456581 SPAG7O75391 227 aa13.17□□□□□ -0.3
LINC00959-201ENST00000456581 MYCNP04198 464 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms