RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 ZNF507Q8TCN5 953 aa8.09□□□□□ -1.11
HDAC9-218ENST00000456174 SCFD1Q8WVM8 642 aa8.09□□□□□ -1.11
HDAC9-218ENST00000456174 ABTB1Q969K4 478 aaPredicted RBP8.09□□□□□ -1.11
HDAC9-218ENST00000456174 NACC2Q96BF6 587 aa8.09□□□□□ -1.11
HDAC9-218ENST00000456174 DDX23Q9BUQ8 820 aaKnown RBP8.09□□□□□ -1.11
HDAC9-218ENST00000456174 TLR10Q9BXR5 811 aa8.09□□□□□ -1.11
HDAC9-218ENST00000456174 TIMMDC1Q9NPL8 285 aa8.09□□□□□ -1.11
HDAC9-218ENST00000456174 ARHGEF38Q9NXL2 777 aa8.09□□□□□ -1.11
HDAC9-218ENST00000456174 UBAP1Q9NZ09 502 aa8.09□□□□□ -1.11
HDAC9-218ENST00000456174 NDUFA13Q9P0J0 144 aa8.09□□□□□ -1.11
HDAC9-218ENST00000456174 FADS3Q9Y5Q0 445 aa8.09□□□□□ -1.11
HDAC9-218ENST00000456174 NDUFB5O43674 189 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 PEX10O60683 326 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 SERPINB7O75635 380 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 PYGMP11217 842 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 GAP43P17677 238 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 FLT3P36888 993 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 ERVK-9P63128 1117 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 PPIL2Q13356 520 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 CCDC153Q494R4 210 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 OLFML2BQ68BL8 750 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 LRRC55Q6ZSA7 311 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 NLRX1Q86UT6 975 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 TRIM50Q86XT4 487 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 ALDH16A1Q8IZ83 802 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 FITM2Q8N6M3 262 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.08□□□□□ -1.12
HDAC9-218ENST00000456174 LRRC8CQ8TDW0 803 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 GPRASP2Q96D09 838 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 PGM2Q96G03 612 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 NOC4LQ9BVI4 516 aaKnown RBP8.08□□□□□ -1.12
HDAC9-218ENST00000456174 RETREG1Q9H6L5 497 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 NHEJ1Q9H9Q4 299 aaPredicted RBP8.08□□□□□ -1.12
HDAC9-218ENST00000456174 BTBD7Q9P203 1132 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 FBXL5Q9UKA1 691 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 TIMM22Q9Y584 194 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 COL4A3BPQ9Y5P4 624 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 NR2E3Q9Y5X4 410 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 ARHGEF35A5YM69 484 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 SFI1A8K8P3 1242 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 TRAF5O00463 557 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 PJA2O43164 708 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 RAD51CO43502 376 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 FAM13AO94988 1023 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 RGS2P41220 211 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 CASP5P51878 434 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 PMS2P54278 862 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 TNNC1P63316 161 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 FKBP3Q00688 224 aaKnown RBP8.08□□□□□ -1.12
HDAC9-218ENST00000456174 CYLC2Q14093 348 aaPredicted RBP8.08□□□□□ -1.12
HDAC9-218ENST00000456174 TRADDQ15628 312 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 MIIPQ5JXC2 388 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 PHLDB3Q6NSJ2 640 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 ILDR2Q71H61 639 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 ZC3H18Q86VM9 953 aaKnown RBP8.08□□□□□ -1.12
HDAC9-218ENST00000456174 RIOX2Q8IUF8 465 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 ANKRD35Q8N283 1001 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 ANKLE1Q8NAG6 615 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 FNDC8Q8TC99 324 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 SREK1Q8WXA9 508 aaKnown RBP8.08□□□□□ -1.12
HDAC9-218ENST00000456174 ITPKCQ96DU7 683 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 CLIP3Q96DZ5 547 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 INPP4AQ96PE3 977 aaPredicted RBP8.08□□□□□ -1.12
HDAC9-218ENST00000456174 SRPK1Q96SB4 655 aaKnown RBP8.08□□□□□ -1.12
HDAC9-218ENST00000456174 OSBPL10Q9BXB5 764 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 TTYH3Q9C0H2 523 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 ASCC2Q9H1I8 757 aaPredicted RBP8.08□□□□□ -1.12
HDAC9-218ENST00000456174 KCTD10Q9H3F6 313 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 BCAS3Q9H6U6 928 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 ETNK1Q9HBU6 452 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 INTS9Q9NV88 658 aaKnown RBP8.08□□□□□ -1.12
HDAC9-218ENST00000456174 KCND2Q9NZV8 630 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 TCEAL9Q9UHQ7 104 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 TMEM59LQ9UK28 342 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 RABL2BQ9UNT1 228 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 KCNH4Q9UQ05 1017 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 N6AMT1Q9Y5N5 214 aa8.08□□□□□ -1.12
HDAC9-218ENST00000456174 PASKQ96RG2 1323 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.07□□□□□ -1.12
HDAC9-218ENST00000456174 BOLA2-SMG1P6H3BVE0 249 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 NKRFO15226 690 aaKnown RBP eCLIP8.07□□□□□ -1.12
HDAC9-218ENST00000456174 MOCS3O95396 460 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 LCA5LO95447 670 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 LDHAP00338 332 aaKnown RBP8.07□□□□□ -1.12
HDAC9-218ENST00000456174 GSTT2P0CG29 244 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 GSTT2BP0CG30 244 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 S100A1P23297 94 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 SERPINB3P29508 390 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 SFNP31947 248 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 MLLT3P42568 568 aaPredicted RBP8.07□□□□□ -1.12
HDAC9-218ENST00000456174 QARSP47897 775 aaKnown RBP8.07□□□□□ -1.12
HDAC9-218ENST00000456174 JAK3P52333 1124 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 KRT76Q01546 638 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 PPARDQ03181 441 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 AP1B1Q10567 949 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 ACVR2BQ13705 512 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 SNX30Q5VWJ9 437 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 Q6ZNX1 250 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 EPM2AIP1Q7L775 607 aaPredicted RBP8.07□□□□□ -1.12
HDAC9-218ENST00000456174 TMC3Q7Z5M5 1100 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms