RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 INTS13Q9NVM9 706 aa18.72■□□□□ 0.59
USP39-208ENST00000455732 LIMD1Q9UGP4 676 aa18.72■□□□□ 0.59
USP39-208ENST00000455732 SORCS3Q9UPU3 1222 aa18.72■□□□□ 0.59
USP39-208ENST00000455732 ABLIM3O94929 683 aa18.71■□□□□ 0.59
USP39-208ENST00000455732 CYP11A1P05108 521 aa18.71■□□□□ 0.59
USP39-208ENST00000455732 ASGR2P07307 311 aa18.71■□□□□ 0.59
USP39-208ENST00000455732 HNRNPA1P09651 372 aaKnown RBP eCLIP18.71■□□□□ 0.59
USP39-208ENST00000455732 CYP24A1Q07973 514 aa18.71■□□□□ 0.59
USP39-208ENST00000455732 SIGLEC14Q08ET2 396 aa18.71■□□□□ 0.59
USP39-208ENST00000455732 PNOCQ13519 176 aa18.71■□□□□ 0.59
USP39-208ENST00000455732 MYBPC2Q14324 1141 aa18.71■□□□□ 0.59
USP39-208ENST00000455732 PSMD6Q15008 389 aa18.71■□□□□ 0.59
USP39-208ENST00000455732 UVSSAQ2YD98 709 aa18.71■□□□□ 0.59
USP39-208ENST00000455732 TPGS2Q68CL5 300 aa18.71■□□□□ 0.59
USP39-208ENST00000455732 BMP8AQ7Z5Y6 402 aa18.71■□□□□ 0.59
USP39-208ENST00000455732 GUF1Q8N442 669 aaKnown RBP18.71■□□□□ 0.59
USP39-208ENST00000455732 LRRC52Q8N7C0 313 aa18.71■□□□□ 0.59
USP39-208ENST00000455732 ZNF461Q8TAF7 563 aa18.71■□□□□ 0.59
USP39-208ENST00000455732 SPATA20Q8TB22 786 aa18.71■□□□□ 0.59
USP39-208ENST00000455732 BORCS6Q96GS4 357 aa18.71■□□□□ 0.59
USP39-208ENST00000455732 MTMR12Q9C0I1 747 aa18.71■□□□□ 0.59
USP39-208ENST00000455732 PIDD1Q9HB75 910 aa18.71■□□□□ 0.59
USP39-208ENST00000455732 DMAC2Q9NW81 257 aa18.71■□□□□ 0.59
USP39-208ENST00000455732 RMND1Q9NWS8 449 aa18.71■□□□□ 0.59
USP39-208ENST00000455732 DSEQ9UL01 958 aa18.71■□□□□ 0.59
USP39-208ENST00000455732 MAFFQ9ULX9 164 aa18.71■□□□□ 0.59
USP39-208ENST00000455732 PTPRJQ12913 1337 aa18.71■□□□□ 0.59
USP39-208ENST00000455732 WDFY4Q6ZS81 3184 aa18.71■□□□□ 0.58
USP39-208ENST00000455732 WDR27A2RRH5 827 aa18.7■□□□□ 0.58
USP39-208ENST00000455732 TMEM221A6NGB7 291 aa18.7■□□□□ 0.58
USP39-208ENST00000455732 OR6C75A6NL08 312 aa18.7■□□□□ 0.58
USP39-208ENST00000455732 M0R296 226 aa18.7■□□□□ 0.58
USP39-208ENST00000455732 EXOC3O60645 756 aa18.7■□□□□ 0.58
USP39-208ENST00000455732 PRPF40AO75400 957 aaKnown RBP18.7■□□□□ 0.58
USP39-208ENST00000455732 ITGB3P05106 788 aa18.7■□□□□ 0.58
USP39-208ENST00000455732 TMEM191BP0C7N4 346 aa18.7■□□□□ 0.58
USP39-208ENST00000455732 POLR2BP30876 1174 aaKnown RBP18.7■□□□□ 0.58
USP39-208ENST00000455732 NFIL3Q16649 462 aa18.7■□□□□ 0.58
USP39-208ENST00000455732 SV2CQ496J9 727 aa18.7■□□□□ 0.58
USP39-208ENST00000455732 PPM1LQ5SGD2 360 aa18.7■□□□□ 0.58
USP39-208ENST00000455732 USP37Q86T82 979 aa18.7■□□□□ 0.58
USP39-208ENST00000455732 KMT2EQ8IZD2 1858 aa18.7■□□□□ 0.58
USP39-208ENST00000455732 SLC7A14Q8TBB6 771 aa18.7■□□□□ 0.58
USP39-208ENST00000455732 ASIC4Q96FT7 647 aa18.7■□□□□ 0.58
USP39-208ENST00000455732 ANKRD36BP1Q96IX9 119 aa18.7■□□□□ 0.58
USP39-208ENST00000455732 MFSD14AQ96MC6 490 aa18.7■□□□□ 0.58
USP39-208ENST00000455732 GSDMAQ96QA5 445 aa18.7■□□□□ 0.58
USP39-208ENST00000455732 SIX4Q9UIU6 781 aa18.7■□□□□ 0.58
USP39-208ENST00000455732 HOOK1Q9UJC3 728 aaKnown RBP18.7■□□□□ 0.58
USP39-208ENST00000455732 TRAF3IP3Q9Y228 551 aa18.7■□□□□ 0.58
USP39-208ENST00000455732 TIMM13Q9Y5L4 95 aaPredicted RBP18.7■□□□□ 0.58
USP39-208ENST00000455732 KPNA7A9QM74 516 aa18.69■□□□□ 0.58
USP39-208ENST00000455732 ATF2P15336 505 aa18.69■□□□□ 0.58
USP39-208ENST00000455732 RBP5P82980 135 aa18.69■□□□□ 0.58
USP39-208ENST00000455732 MTMR3Q13615 1198 aa18.69■□□□□ 0.58
USP39-208ENST00000455732 DUOXA2Q1HG44 320 aa18.69■□□□□ 0.58
USP39-208ENST00000455732 OVOS1Q6IE37 1185 aa18.69■□□□□ 0.58
USP39-208ENST00000455732 UBALD2Q8IYN6 164 aa18.69■□□□□ 0.58
USP39-208ENST00000455732 OR5B17Q8NGF7 314 aa18.69■□□□□ 0.58
USP39-208ENST00000455732 MYADMQ96S97 322 aa18.69■□□□□ 0.58
USP39-208ENST00000455732 CGRRF1Q99675 332 aa18.69■□□□□ 0.58
USP39-208ENST00000455732 SMOC2Q9H3U7 446 aa18.69■□□□□ 0.58
USP39-208ENST00000455732 EPS15L1Q9UBC2 864 aa18.69■□□□□ 0.58
USP39-208ENST00000455732 AGAP1Q9UPQ3 857 aa18.69■□□□□ 0.58
USP39-208ENST00000455732 CYB561D2O14569 222 aa18.68■□□□□ 0.58
USP39-208ENST00000455732 CALUO43852 315 aaPredicted RBP18.68■□□□□ 0.58
USP39-208ENST00000455732 GADD45BO75293 160 aaPredicted RBP18.68■□□□□ 0.58
USP39-208ENST00000455732 SMC2O95347 1197 aa18.68■□□□□ 0.58
USP39-208ENST00000455732 TNNC2P02585 160 aa18.68■□□□□ 0.58
USP39-208ENST00000455732 NR3C1P04150 777 aa18.68■□□□□ 0.58
USP39-208ENST00000455732 COBLL1Q53SF7 1204 aa18.68■□□□□ 0.58
USP39-208ENST00000455732 LMBRD2Q68DH5 695 aaPredicted RBP18.68■□□□□ 0.58
USP39-208ENST00000455732 GRASPQ7Z6J2 395 aaPredicted RBP18.68■□□□□ 0.58
USP39-208ENST00000455732 TCEAL8Q8IYN2 117 aa18.68■□□□□ 0.58
USP39-208ENST00000455732 CSGALNACT2Q8N6G5 542 aa18.68■□□□□ 0.58
USP39-208ENST00000455732 RDH13Q8NBN7 331 aa18.68■□□□□ 0.58
USP39-208ENST00000455732 FAM84AQ96KN4 292 aa18.68■□□□□ 0.58
USP39-208ENST00000455732 FNBP1Q96RU3 617 aa18.68■□□□□ 0.58
USP39-208ENST00000455732 GTPBP4Q9BZE4 634 aaKnown RBP18.68■□□□□ 0.58
USP39-208ENST00000455732 GZF1Q9H116 711 aaPredicted RBP18.68■□□□□ 0.58
USP39-208ENST00000455732 AFF4Q9UHB7 1163 aaKnown RBP18.68■□□□□ 0.58
USP39-208ENST00000455732 CCL16O15467 120 aa18.67■□□□□ 0.58
USP39-208ENST00000455732 KINO60870 393 aaKnown RBP18.67■□□□□ 0.58
USP39-208ENST00000455732 DLATP10515 647 aaKnown RBP18.67■□□□□ 0.58
USP39-208ENST00000455732 GBP2P32456 591 aaPredicted RBP18.67■□□□□ 0.58
USP39-208ENST00000455732 ZCWPW2Q504Y3 356 aa18.67■□□□□ 0.58
USP39-208ENST00000455732 KCNH6Q9H252 994 aa18.67■□□□□ 0.58
USP39-208ENST00000455732 KCNK12Q9HB15 430 aa18.67■□□□□ 0.58
USP39-208ENST00000455732 GDAP2Q9NXN4 497 aa18.67■□□□□ 0.58
USP39-208ENST00000455732 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.67■□□□□ 0.58
USP39-208ENST00000455732 MAPK13O15264 365 aa18.66■□□□□ 0.58
USP39-208ENST00000455732 XYLBO75191 536 aa18.66■□□□□ 0.58
USP39-208ENST00000455732 LAMP2P13473 410 aa18.66■□□□□ 0.58
USP39-208ENST00000455732 CPB1P15086 417 aa18.66■□□□□ 0.58
USP39-208ENST00000455732 ARPP19P56211 112 aa18.66■□□□□ 0.58
USP39-208ENST00000455732 UBE2HP62256 183 aa18.66■□□□□ 0.58
USP39-208ENST00000455732 CLDN10P78369 228 aa18.66■□□□□ 0.58
USP39-208ENST00000455732 NTHL1P78549 312 aa18.66■□□□□ 0.58
USP39-208ENST00000455732 GPR17Q13304 367 aa18.66■□□□□ 0.58
USP39-208ENST00000455732 ZNF658Q5TYW1 1059 aaPredicted RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms