RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 MMRN2Q9H8L6 949 aa15.36■□□□□ 0.05
HMGXB4-204ENST00000455359 RXFP1Q9HBX9 757 aa15.36■□□□□ 0.05
HMGXB4-204ENST00000455359 ENTPD7Q9NQZ7 604 aa15.36■□□□□ 0.05
HMGXB4-204ENST00000455359 FNIP2Q9P278 1114 aa15.36■□□□□ 0.05
HMGXB4-204ENST00000455359 SNX9Q9Y5X1 595 aa15.36■□□□□ 0.05
HMGXB4-204ENST00000455359 TACC1O75410 805 aa15.35■□□□□ 0.05
HMGXB4-204ENST00000455359 CXCL14O95715 111 aa15.35■□□□□ 0.05
HMGXB4-204ENST00000455359 IGFBP6P24592 240 aaPredicted RBP15.35■□□□□ 0.05
HMGXB4-204ENST00000455359 LHX1P48742 406 aa15.35■□□□□ 0.05
HMGXB4-204ENST00000455359 ERVFC1P60507 584 aa15.35■□□□□ 0.05
HMGXB4-204ENST00000455359 NOP14P78316 857 aaKnown RBP15.35■□□□□ 0.05
HMGXB4-204ENST00000455359 YWHAHQ04917 246 aaPredicted RBP15.35■□□□□ 0.05
HMGXB4-204ENST00000455359 PTPN14Q15678 1187 aa15.35■□□□□ 0.05
HMGXB4-204ENST00000455359 WDR72Q3MJ13 1102 aa15.35■□□□□ 0.05
HMGXB4-204ENST00000455359 MIIPQ5JXC2 388 aa15.35■□□□□ 0.05
HMGXB4-204ENST00000455359 VARS2Q5ST30 1063 aaKnown RBP15.35■□□□□ 0.05
HMGXB4-204ENST00000455359 GBP6Q6ZN66 633 aa15.35■□□□□ 0.05
HMGXB4-204ENST00000455359 TAS1R1Q7RTX1 841 aa15.35■□□□□ 0.05
HMGXB4-204ENST00000455359 LUZP1Q86V48 1076 aa15.35■□□□□ 0.05
HMGXB4-204ENST00000455359 TMEM130Q8N3G9 435 aa15.35■□□□□ 0.05
HMGXB4-204ENST00000455359 EHBP1Q8NDI1 1231 aa15.35■□□□□ 0.05
HMGXB4-204ENST00000455359 LNX1Q8TBB1 728 aaPredicted RBP15.35■□□□□ 0.05
HMGXB4-204ENST00000455359 RIN2Q8WYP3 895 aaPredicted RBP15.35■□□□□ 0.05
HMGXB4-204ENST00000455359 CDCA3Q99618 268 aaPredicted RBP15.35■□□□□ 0.05
HMGXB4-204ENST00000455359 NIF3L1Q9GZT8 377 aa15.35■□□□□ 0.05
HMGXB4-204ENST00000455359 CYP3A43Q9HB55 503 aa15.35■□□□□ 0.05
HMGXB4-204ENST00000455359 CHD7Q9P2D1 2997 aa15.35■□□□□ 0.05
HMGXB4-204ENST00000455359 C2orf71A6NGG8 1288 aa15.34■□□□□ 0.05
HMGXB4-204ENST00000455359 OR6C75A6NL08 312 aa15.34■□□□□ 0.05
HMGXB4-204ENST00000455359 RFXAPO00287 272 aa15.34■□□□□ 0.05
HMGXB4-204ENST00000455359 NCK2O43639 380 aa15.34■□□□□ 0.05
HMGXB4-204ENST00000455359 TKTP29401 623 aaKnown RBP15.34■□□□□ 0.05
HMGXB4-204ENST00000455359 COPB1P53618 953 aaKnown RBP15.34■□□□□ 0.05
HMGXB4-204ENST00000455359 HSP90AA4PQ58FG1 418 aa15.34■□□□□ 0.05
HMGXB4-204ENST00000455359 RTP2Q5QGT7 225 aa15.34■□□□□ 0.05
HMGXB4-204ENST00000455359 FKBP15Q5T1M5 1219 aa15.34■□□□□ 0.05
HMGXB4-204ENST00000455359 OVOS1Q6IE37 1185 aa15.34■□□□□ 0.05
HMGXB4-204ENST00000455359 ZNF280DQ6N043 979 aa15.34■□□□□ 0.05
HMGXB4-204ENST00000455359 CEP57Q86XR8 500 aa15.34■□□□□ 0.05
HMGXB4-204ENST00000455359 THEM5Q8N1Q8 247 aa15.34■□□□□ 0.05
HMGXB4-204ENST00000455359 PDCL2Q8N4E4 241 aa15.34■□□□□ 0.05
HMGXB4-204ENST00000455359 SEMA4DQ92854 862 aa15.34■□□□□ 0.05
HMGXB4-204ENST00000455359 CDX2Q99626 313 aaPredicted RBP15.34■□□□□ 0.05
HMGXB4-204ENST00000455359 NSUN3Q9H649 340 aaKnown RBP15.34■□□□□ 0.05
HMGXB4-204ENST00000455359 MTMR10Q9NXD2 777 aa15.34■□□□□ 0.05
HMGXB4-204ENST00000455359 MTRRQ9UBK8 725 aa15.34■□□□□ 0.05
HMGXB4-204ENST00000455359 LGALS16A8MUM7 142 aa15.33■□□□□ 0.04
HMGXB4-204ENST00000455359 I3L4J1 428 aa15.33■□□□□ 0.04
HMGXB4-204ENST00000455359 GABRDO14764 452 aa15.33■□□□□ 0.04
HMGXB4-204ENST00000455359 TBC1D4O60343 1298 aa15.33■□□□□ 0.04
HMGXB4-204ENST00000455359 ADH1AP07327 375 aa15.33■□□□□ 0.04
HMGXB4-204ENST00000455359 WARSP23381 471 aaKnown RBP15.33■□□□□ 0.04
HMGXB4-204ENST00000455359 TBXAS1P24557 533 aaPredicted RBP15.33■□□□□ 0.04
HMGXB4-204ENST00000455359 PSMD5Q16401 504 aa15.33■□□□□ 0.04
HMGXB4-204ENST00000455359 EXOC3L4Q17RC7 722 aa15.33■□□□□ 0.04
HMGXB4-204ENST00000455359 SOWAHAQ2M3V2 549 aa15.33■□□□□ 0.04
HMGXB4-204ENST00000455359 FILIP1LQ4L180 1135 aa15.33■□□□□ 0.04
HMGXB4-204ENST00000455359 SCARA3Q6AZY7 606 aa15.33■□□□□ 0.04
HMGXB4-204ENST00000455359 SLC8B1Q6J4K2 584 aa15.33■□□□□ 0.04
HMGXB4-204ENST00000455359 ENOSF1Q7L5Y1 443 aa15.33■□□□□ 0.04
HMGXB4-204ENST00000455359 APTXQ7Z2E3 356 aaKnown RBP15.33■□□□□ 0.04
HMGXB4-204ENST00000455359 PPFIBP1Q86W92 1011 aa15.33■□□□□ 0.04
HMGXB4-204ENST00000455359 LMO3Q8TAP4 145 aa15.33■□□□□ 0.04
HMGXB4-204ENST00000455359 JAKMIP2Q96AA8 810 aa15.33■□□□□ 0.04
HMGXB4-204ENST00000455359 MMS19Q96T76 1030 aa15.33■□□□□ 0.04
HMGXB4-204ENST00000455359 DNAI2Q9GZS0 605 aa15.33■□□□□ 0.04
HMGXB4-204ENST00000455359 TAB2Q9NYJ8 693 aa15.33■□□□□ 0.04
HMGXB4-204ENST00000455359 NXF1Q9UBU9 619 aaKnown RBP15.33■□□□□ 0.04
HMGXB4-204ENST00000455359 MAFFQ9ULX9 164 aa15.33■□□□□ 0.04
HMGXB4-204ENST00000455359 L1RE1Q9UN81 338 aa15.33■□□□□ 0.04
HMGXB4-204ENST00000455359 MTCH2Q9Y6C9 303 aa15.33■□□□□ 0.04
HMGXB4-204ENST00000455359 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.32■□□□□ 0.04
HMGXB4-204ENST00000455359 ATP1A3P13637 1013 aa15.32■□□□□ 0.04
HMGXB4-204ENST00000455359 PCSK1P29120 753 aa15.32■□□□□ 0.04
HMGXB4-204ENST00000455359 IRS1P35568 1242 aa15.32■□□□□ 0.04
HMGXB4-204ENST00000455359 NDUFV1P49821 464 aa15.32■□□□□ 0.04
HMGXB4-204ENST00000455359 YWHAEP62258 255 aaKnown RBP15.32■□□□□ 0.04
HMGXB4-204ENST00000455359 GCNT1Q02742 428 aa15.32■□□□□ 0.04
HMGXB4-204ENST00000455359 SMARCB1Q12824 385 aa15.32■□□□□ 0.04
HMGXB4-204ENST00000455359 ADGRE1Q14246 886 aa15.32■□□□□ 0.04
HMGXB4-204ENST00000455359 PLPP4Q5VZY2 271 aa15.32■□□□□ 0.04
HMGXB4-204ENST00000455359 WSCD1Q658N2 575 aa15.32■□□□□ 0.04
HMGXB4-204ENST00000455359 UNC93AQ86WB7 457 aa15.32■□□□□ 0.04
HMGXB4-204ENST00000455359 ADGRF2Q8IZF7 708 aa15.32■□□□□ 0.04
HMGXB4-204ENST00000455359 FAM161BQ96MY7 647 aa15.32■□□□□ 0.04
HMGXB4-204ENST00000455359 GUCD1Q96NT3 240 aa15.32■□□□□ 0.04
HMGXB4-204ENST00000455359 NT5C1BQ96P26 610 aa15.32■□□□□ 0.04
HMGXB4-204ENST00000455359 ACBD6Q9BR61 282 aa15.32■□□□□ 0.04
HMGXB4-204ENST00000455359 BCO2Q9BYV7 579 aa15.32■□□□□ 0.04
HMGXB4-204ENST00000455359 INTS2Q9H0H0 1204 aaKnown RBP15.32■□□□□ 0.04
HMGXB4-204ENST00000455359 APOBEC3GQ9HC16 384 aaKnown RBP15.32■□□□□ 0.04
HMGXB4-204ENST00000455359 GCNT4Q9P109 453 aa15.32■□□□□ 0.04
HMGXB4-204ENST00000455359 DPP7Q9UHL4 492 aa15.32■□□□□ 0.04
HMGXB4-204ENST00000455359 DAAM1Q9Y4D1 1078 aa15.32■□□□□ 0.04
HMGXB4-204ENST00000455359 HIDE1A8MVS5 230 aa15.31■□□□□ 0.04
HMGXB4-204ENST00000455359 PES1O00541 588 aaKnown RBP15.31■□□□□ 0.04
HMGXB4-204ENST00000455359 TEX28O15482 410 aa15.31■□□□□ 0.04
HMGXB4-204ENST00000455359 CLSTN1O94985 981 aa15.31■□□□□ 0.04
HMGXB4-204ENST00000455359 CNPP09543 421 aaKnown RBP15.31■□□□□ 0.04
HMGXB4-204ENST00000455359 RFX1P22670 979 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms