RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 TDGF1P13385 188 aa17.42■□□□□ 0.38
GPC1-206ENST00000455111 MARCKSP29966 332 aaPredicted RBP17.42■□□□□ 0.38
GPC1-206ENST00000455111 DDIT3P35638 169 aa17.42■□□□□ 0.38
GPC1-206ENST00000455111 MCM2P49736 904 aa17.42■□□□□ 0.38
GPC1-206ENST00000455111 TSSK4Q6SA08 328 aa17.42■□□□□ 0.38
GPC1-206ENST00000455111 PDZD4Q76G19 769 aaPredicted RBP17.42■□□□□ 0.38
GPC1-206ENST00000455111 BRAPQ7Z569 592 aa17.42■□□□□ 0.38
GPC1-206ENST00000455111 SFR1Q86XK3 245 aa17.42■□□□□ 0.38
GPC1-206ENST00000455111 DCLK2Q8N568 766 aa17.42■□□□□ 0.38
GPC1-206ENST00000455111 ATAD1Q8NBU5 361 aa17.42■□□□□ 0.38
GPC1-206ENST00000455111 SHDQ96IW2 340 aa17.42■□□□□ 0.38
GPC1-206ENST00000455111 SENP8Q96LD8 212 aa17.42■□□□□ 0.38
GPC1-206ENST00000455111 RPF1Q9H9Y2 349 aaKnown RBP17.42■□□□□ 0.38
GPC1-206ENST00000455111 H0YCG3 227 aa17.41■□□□□ 0.38
GPC1-206ENST00000455111 LMNAP02545 664 aaKnown RBP17.41■□□□□ 0.38
GPC1-206ENST00000455111 TYMPP19971 482 aa17.41■□□□□ 0.38
GPC1-206ENST00000455111 CASP5P51878 434 aa17.41■□□□□ 0.38
GPC1-206ENST00000455111 PFKPQ01813 784 aa17.41■□□□□ 0.38
GPC1-206ENST00000455111 DSTYKQ6XUX3 929 aa17.41■□□□□ 0.38
GPC1-206ENST00000455111 GAREM2Q75VX8 874 aa17.41■□□□□ 0.38
GPC1-206ENST00000455111 DYMQ7RTS9 669 aa17.41■□□□□ 0.38
GPC1-206ENST00000455111 ZNF720Q7Z2F6 126 aa17.41■□□□□ 0.38
GPC1-206ENST00000455111 LRRTM3Q86VH5 581 aa17.41■□□□□ 0.38
GPC1-206ENST00000455111 ZSCAN18Q8TBC5 510 aaPredicted RBP17.41■□□□□ 0.38
GPC1-206ENST00000455111 SMARCD2Q92925 531 aa17.41■□□□□ 0.38
GPC1-206ENST00000455111 FAM212AQ96EL1 285 aa17.41■□□□□ 0.38
GPC1-206ENST00000455111 ZNF512Q96ME7 567 aaPredicted RBP17.41■□□□□ 0.38
GPC1-206ENST00000455111 ZHX3Q9H4I2 956 aa17.41■□□□□ 0.38
GPC1-206ENST00000455111 TRPV4Q9HBA0 871 aa17.41■□□□□ 0.38
GPC1-206ENST00000455111 MAFFQ9ULX9 164 aa17.41■□□□□ 0.38
GPC1-206ENST00000455111 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.41■□□□□ 0.38
GPC1-206ENST00000455111 OTOGLQ3ZCN5 2332 aa17.4■□□□□ 0.38
GPC1-206ENST00000455111 A0A1W2PRU2 124 aa17.4■□□□□ 0.38
GPC1-206ENST00000455111 VPS37CA5D8V6 355 aaPredicted RBP17.4■□□□□ 0.38
GPC1-206ENST00000455111 ZNF197O14709 1029 aa17.4■□□□□ 0.38
GPC1-206ENST00000455111 CYP11A1P05108 521 aa17.4■□□□□ 0.38
GPC1-206ENST00000455111 ATF6P18850 670 aa17.4■□□□□ 0.38
GPC1-206ENST00000455111 HOXC13P31276 330 aa17.4■□□□□ 0.38
GPC1-206ENST00000455111 GAS6Q14393 721 aa17.4■□□□□ 0.38
GPC1-206ENST00000455111 OVOS1Q6IE37 1185 aa17.4■□□□□ 0.38
GPC1-206ENST00000455111 CXorf38Q8TB03 319 aa17.4■□□□□ 0.38
GPC1-206ENST00000455111 DNASE1L2Q92874 299 aa17.4■□□□□ 0.38
GPC1-206ENST00000455111 IL21Q9HBE4 155 aa17.4■□□□□ 0.38
GPC1-206ENST00000455111 ZFP14Q9HCL3 533 aa17.4■□□□□ 0.38
GPC1-206ENST00000455111 SPATA6Q9NWH7 488 aaPredicted RBP17.4■□□□□ 0.38
GPC1-206ENST00000455111 OR6C75A6NL08 312 aa17.39■□□□□ 0.37
GPC1-206ENST00000455111 CENPBP07199 599 aaPredicted RBP17.39■□□□□ 0.37
GPC1-206ENST00000455111 SYT1P21579 422 aa17.39■□□□□ 0.37
GPC1-206ENST00000455111 GDI1P31150 447 aa17.39■□□□□ 0.37
GPC1-206ENST00000455111 MYBPC2Q14324 1141 aa17.39■□□□□ 0.37
GPC1-206ENST00000455111 CYP4A22Q5TCH4 519 aa17.39■□□□□ 0.37
GPC1-206ENST00000455111 LPIN3Q9BQK8 851 aa17.39■□□□□ 0.37
GPC1-206ENST00000455111 TRMT61BQ9BVS5 477 aaKnown RBP17.39■□□□□ 0.37
GPC1-206ENST00000455111 BCO2Q9BYV7 579 aa17.39■□□□□ 0.37
GPC1-206ENST00000455111 PRMT8Q9NR22 394 aaPredicted RBP17.39■□□□□ 0.37
GPC1-206ENST00000455111 ASAH2Q9NR71 780 aa17.39■□□□□ 0.37
GPC1-206ENST00000455111 TMLHEQ9NVH6 421 aa17.39■□□□□ 0.37
GPC1-206ENST00000455111 SRPRBQ9Y5M8 271 aaKnown RBP17.39■□□□□ 0.37
GPC1-206ENST00000455111 PTPRZ1P23471 2315 aaPredicted RBP17.39■□□□□ 0.37
GPC1-206ENST00000455111 HEPACAM2A8MVW5 462 aa17.38■□□□□ 0.37
GPC1-206ENST00000455111 LILRB5O75023 590 aa17.38■□□□□ 0.37
GPC1-206ENST00000455111 BMP15O95972 392 aa17.38■□□□□ 0.37
GPC1-206ENST00000455111 KRT18P05783 430 aaKnown RBP17.38■□□□□ 0.37
GPC1-206ENST00000455111 PSMC3P17980 439 aa17.38■□□□□ 0.37
GPC1-206ENST00000455111 RPS9P46781 194 aaKnown RBP17.38■□□□□ 0.37
GPC1-206ENST00000455111 CSTF1Q05048 431 aaKnown RBP17.38■□□□□ 0.37
GPC1-206ENST00000455111 MTAPQ13126 283 aa17.38■□□□□ 0.37
GPC1-206ENST00000455111 TMEM132DQ14C87 1099 aa17.38■□□□□ 0.37
GPC1-206ENST00000455111 KYAT1Q16773 422 aa17.38■□□□□ 0.37
GPC1-206ENST00000455111 CCDC142Q17RM4 750 aa17.38■□□□□ 0.37
GPC1-206ENST00000455111 ZNF528Q3MIS6 628 aa17.38■□□□□ 0.37
GPC1-206ENST00000455111 ADALQ6DHV7 355 aa17.38■□□□□ 0.37
GPC1-206ENST00000455111 IQCEQ6IPM2 695 aa17.38■□□□□ 0.37
GPC1-206ENST00000455111 MFSD6LQ8IWD5 586 aa17.38■□□□□ 0.37
GPC1-206ENST00000455111 ZBTB44Q8NCP5 570 aa17.38■□□□□ 0.37
GPC1-206ENST00000455111 GLIS3Q8NEA6 775 aa17.38■□□□□ 0.37
GPC1-206ENST00000455111 USP28Q96RU2 1077 aa17.38■□□□□ 0.37
GPC1-206ENST00000455111 ZCWPW1Q9H0M4 648 aa17.38■□□□□ 0.37
GPC1-206ENST00000455111 BRD9Q9H8M2 597 aa17.38■□□□□ 0.37
GPC1-206ENST00000455111 TRPV5Q9NQA5 729 aa17.38■□□□□ 0.37
GPC1-206ENST00000455111 TBC1D7Q9P0N9 293 aa17.38■□□□□ 0.37
GPC1-206ENST00000455111 FBXO4Q9UKT5 387 aa17.38■□□□□ 0.37
GPC1-206ENST00000455111 AGO2Q9UKV8 859 aaKnown RBP17.38■□□□□ 0.37
GPC1-206ENST00000455111 MTMR6Q9Y217 621 aa17.38■□□□□ 0.37
GPC1-206ENST00000455111 DERAQ9Y315 318 aa17.38■□□□□ 0.37
GPC1-206ENST00000455111 GREB1Q4ZG55 1949 aa17.37■□□□□ 0.37
GPC1-206ENST00000455111 FRMD3A2A2Y4 597 aa17.37■□□□□ 0.37
GPC1-206ENST00000455111 TBCAO75347 108 aaKnown RBP17.37■□□□□ 0.37
GPC1-206ENST00000455111 PRAMEF12O95522 483 aa17.37■□□□□ 0.37
GPC1-206ENST00000455111 SOX9P48436 509 aa17.37■□□□□ 0.37
GPC1-206ENST00000455111 CEBPZQ03701 1054 aaKnown RBP17.37■□□□□ 0.37
GPC1-206ENST00000455111 TXNDC11Q6PKC3 985 aa17.37■□□□□ 0.37
GPC1-206ENST00000455111 ZNF852Q6ZMS4 543 aa17.37■□□□□ 0.37
GPC1-206ENST00000455111 DNAJB7Q7Z6W7 309 aaPredicted RBP17.37■□□□□ 0.37
GPC1-206ENST00000455111 TMEM150AQ86TG1 271 aa17.37■□□□□ 0.37
GPC1-206ENST00000455111 CD302Q8IX05 232 aa17.37■□□□□ 0.37
GPC1-206ENST00000455111 STKLD1Q8NE28 680 aa17.37■□□□□ 0.37
GPC1-206ENST00000455111 RIN3Q8TB24 985 aa17.37■□□□□ 0.37
GPC1-206ENST00000455111 PSMG2Q969U7 264 aa17.37■□□□□ 0.37
GPC1-206ENST00000455111 RMDN1Q96DB5 314 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms