RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 TNFRSF8P28908 595 aa7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 NOMO3P69849 1222 aa7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 KCNA10Q16322 511 aa7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 MAP9Q49MG5 647 aa7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 LRRC38Q5VT99 294 aa7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 PLEKHA7Q6IQ23 1121 aa7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 TMEM270Q6UE05 265 aa7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 MON1BQ7L1V2 547 aa7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 ARCQ7LC44 396 aa7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 CREG2Q8IUH2 290 aa7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 TOP6BLQ8N6T0 577 aa7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 KIF12Q96FN5 646 aa7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 GLT1D1Q96MS3 346 aa7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 FTHL17Q9BXU8 183 aa7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 FAM49AQ9H0Q0 323 aaPredicted RBP7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 PDCL3Q9H2J4 239 aa7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 TRIM10Q9UDY6 481 aa7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 DUSP10Q9Y6W6 482 aa7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 PIRO00625 290 aa7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 THAP12O43422 761 aa7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 RPS6KA5O75582 802 aa7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 EOMESO95936 686 aa7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 CST3P01034 146 aaPredicted RBP7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 GJB1P08034 283 aa7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 MMEP08473 750 aa7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 H2AFXP16104 143 aaPredicted RBP7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 MMP8P22894 467 aa7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 GBP1P32455 592 aa7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 WNT7BP56706 349 aa7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 BEX3Q00994 111 aa7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 UBXN11Q5T124 520 aa7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 DAAM2Q86T65 1068 aa7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 TMEM86AQ8N2M4 240 aa7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 NIPA2Q8N8Q9 360 aa7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 CPB2Q96IY4 423 aa7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 OSMRQ99650 979 aa7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 ERVK-5Q9HDB9 667 aa7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 HOMER3Q9NSC5 361 aa7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 CTTNBP2NLQ9P2B4 639 aa7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 IP6K2Q9UHH9 426 aa7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 SALL4Q9UJQ4 1053 aa7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 CDY2AQ9Y6F7 541 aa7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 UMODL1Q5DID0 1318 aa7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 PGRMC1O00264 195 aaKnown RBP7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 PSTPIP1O43586 416 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 AOC2O75106 756 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 TBC1D8O95759 1140 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 NFICP08651 508 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 DESP17661 470 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 CETN2P41208 172 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 GABRB2P47870 512 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 ACLYP53396 1101 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 COPS2P61201 443 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 PAK2Q13177 524 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 ITGA7Q13683 1181 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 PIGHQ14442 188 aaPredicted RBP7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 ZNF268Q14587 947 aaPredicted RBP7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 PTGISQ16647 500 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 ARHGAP17Q68EM7 881 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 GDF6Q6KF10 455 aaPredicted RBP7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 LCLAT1Q6UWP7 414 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 FAM228AQ86W67 206 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 C1orf131Q8NDD1 294 aaKnown RBP7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 SLC20A1Q8WUM9 679 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 KAT5Q92993 513 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 ZNF653Q96CK0 615 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 FAM212AQ96EL1 285 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 TMEM176AQ96HP8 235 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 ZIC5Q96T25 663 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 PCDHB18PQ96TA0 734 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.27□□□□□ -1.257e-6■■■■□ 21.2
ECHDC1-210ENST00000454859 PI4K2AQ9BTU6 479 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 NT5C1AQ9BXI3 368 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 PACSIN1Q9BY11 444 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 THAP2Q9H0W7 228 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 SLITRK6Q9H5Y7 841 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 PRDM16Q9HAZ2 1276 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 SEPT11Q9NVA2 429 aaKnown RBP7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 TMEM59LQ9UK28 342 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 PIN4Q9Y237 131 aaKnown RBP7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 GOLGA6L10A0A0M3HER8 536 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 A0A0U1RQJ8 604 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 MYO1FO00160 1098 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 DNM1LO00429 736 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 NDC80O14777 642 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 BUB1BO60566 1050 aaPredicted RBP7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 ZNF189O75820 626 aaPredicted RBP7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 RECQL4O94761 1208 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 ABL1P00519 1130 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 ITGB3P05106 788 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 GRK4P32298 578 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 CTNNA1P35221 906 aaKnown RBP7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 TAF6P49848 677 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 BFSP2Q13515 415 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 DSC3Q14574 896 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 WDR72Q3MJ13 1102 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 SGO2Q562F6 1265 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 C9orf57Q5W0N0 161 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms