RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 MAP2K5Q13163 448 aa14.52□□□□□ -0.09
CLK3-203ENST00000454830 TRIP13Q15645 432 aaPredicted RBP14.52□□□□□ -0.09
CLK3-203ENST00000454830 C1orf127Q8N9H9 656 aa14.52□□□□□ -0.09
CLK3-203ENST00000454830 RUBCNQ92622 972 aa14.52□□□□□ -0.09
CLK3-203ENST00000454830 ABLIM1O14639 778 aa14.51□□□□□ -0.09
CLK3-203ENST00000454830 MCF2P10911 925 aa14.51□□□□□ -0.09
CLK3-203ENST00000454830 CUL1Q13616 776 aa14.51□□□□□ -0.09
CLK3-203ENST00000454830 SLC13A5Q86YT5 568 aaPredicted RBP14.51□□□□□ -0.09
CLK3-203ENST00000454830 WHAMMQ8TF30 809 aa14.51□□□□□ -0.09
CLK3-203ENST00000454830 DNAJB3Q8WWF6 145 aa14.51□□□□□ -0.09
CLK3-203ENST00000454830 HPDLQ96IR7 371 aa14.51□□□□□ -0.09
CLK3-203ENST00000454830 ABT1Q9ULW3 272 aaKnown RBP14.51□□□□□ -0.09
CLK3-203ENST00000454830 SCINQ9Y6U3 715 aa14.51□□□□□ -0.09
CLK3-203ENST00000454830 MROH7Q68CQ1 1323 aa14.51□□□□□ -0.09
CLK3-203ENST00000454830 KRT14P02533 472 aa14.51□□□□□ -0.09
CLK3-203ENST00000454830 CAPN2P17655 700 aa14.51□□□□□ -0.09
CLK3-203ENST00000454830 CETN2P41208 172 aa14.51□□□□□ -0.09
CLK3-203ENST00000454830 HADHBP55084 474 aaKnown RBP14.51□□□□□ -0.09
CLK3-203ENST00000454830 RPL7AP62424 266 aaKnown RBP14.51□□□□□ -0.09
CLK3-203ENST00000454830 FAM47CQ5HY64 1035 aa14.51□□□□□ -0.09
CLK3-203ENST00000454830 ZNF467Q7Z7K2 595 aaPredicted RBP14.51□□□□□ -0.09
CLK3-203ENST00000454830 ATG4AQ8WYN0 398 aa14.51□□□□□ -0.09
CLK3-203ENST00000454830 ACSF2Q96CM8 615 aaPredicted RBP14.51□□□□□ -0.09
CLK3-203ENST00000454830 PTPRHQ9HD43 1115 aa14.51□□□□□ -0.09
CLK3-203ENST00000454830 PARVAQ9NVD7 372 aa14.51□□□□□ -0.09
CLK3-203ENST00000454830 PCDHA3Q9Y5H8 950 aa14.51□□□□□ -0.09
CLK3-203ENST00000454830 B4GALT4O60513 344 aa14.51□□□□□ -0.09
CLK3-203ENST00000454830 CYP1A1P04798 512 aaPredicted RBP14.51□□□□□ -0.09
CLK3-203ENST00000454830 P4HA1P13674 534 aa14.51□□□□□ -0.09
CLK3-203ENST00000454830 DHX9Q08211 1270 aaKnown RBP14.51□□□□□ -0.09
CLK3-203ENST00000454830 CEP85LQ5SZL2 805 aa14.51□□□□□ -0.09
CLK3-203ENST00000454830 MON1BQ7L1V2 547 aa14.51□□□□□ -0.09
CLK3-203ENST00000454830 JAMLQ86YT9 394 aa14.51□□□□□ -0.09
CLK3-203ENST00000454830 TFAP2BQ92481 460 aa14.51□□□□□ -0.09
CLK3-203ENST00000454830 ZIM3Q96PE6 472 aa14.51□□□□□ -0.09
CLK3-203ENST00000454830 SNTG2Q9NY99 539 aa14.51□□□□□ -0.09
CLK3-203ENST00000454830 PARP2Q9UGN5 583 aa14.51□□□□□ -0.09
CLK3-203ENST00000454830 ASIC3Q9UHC3 531 aa14.51□□□□□ -0.09
CLK3-203ENST00000454830 ATP8A1Q9Y2Q0 1164 aa14.51□□□□□ -0.09
CLK3-203ENST00000454830 UNCXA6NJT0 531 aa14.5□□□□□ -0.09
CLK3-203ENST00000454830 SMIM10L2AP0DMW4 78 aa14.5□□□□□ -0.09
CLK3-203ENST00000454830 SMIM10L2BP0DMW5 78 aa14.5□□□□□ -0.09
CLK3-203ENST00000454830 YARSP54577 528 aaKnown RBP14.5□□□□□ -0.09
CLK3-203ENST00000454830 IFFO1Q0D2I5 559 aa14.5□□□□□ -0.09
CLK3-203ENST00000454830 CLUL1Q15846 466 aa14.5□□□□□ -0.09
CLK3-203ENST00000454830 PPP2R5EQ16537 467 aa14.5□□□□□ -0.09
CLK3-203ENST00000454830 PIN4Q9Y237 131 aaKnown RBP14.5□□□□□ -0.09
CLK3-203ENST00000454830 TSPAN1O60635 241 aa14.5□□□□□ -0.09
CLK3-203ENST00000454830 PHF2O75151 1096 aa14.5□□□□□ -0.09
CLK3-203ENST00000454830 C6orf222P0C671 652 aaPredicted RBP14.5□□□□□ -0.09
CLK3-203ENST00000454830 PROZP22891 400 aa14.5□□□□□ -0.09
CLK3-203ENST00000454830 CTNNA1P35221 906 aaKnown RBP14.5□□□□□ -0.09
CLK3-203ENST00000454830 ZNF200P98182 395 aaPredicted RBP14.5□□□□□ -0.09
CLK3-203ENST00000454830 MAMLD1Q13495 774 aa14.5□□□□□ -0.09
CLK3-203ENST00000454830 SLC10A6Q3KNW5 377 aa14.5□□□□□ -0.09
CLK3-203ENST00000454830 OLFML2BQ68BL8 750 aa14.5□□□□□ -0.09
CLK3-203ENST00000454830 UHMK1Q8TAS1 419 aaKnown RBP14.5□□□□□ -0.09
CLK3-203ENST00000454830 LRRC45Q96CN5 670 aa14.5□□□□□ -0.09
CLK3-203ENST00000454830 AVENQ9NQS1 362 aaPredicted RBP14.5□□□□□ -0.09
CLK3-203ENST00000454830 FAM114A2Q9NRY5 505 aa14.5□□□□□ -0.09
CLK3-203ENST00000454830 DPP3Q9NY33 737 aa14.5□□□□□ -0.09
CLK3-203ENST00000454830 KLK14Q9P0G3 267 aa14.5□□□□□ -0.09
CLK3-203ENST00000454830 O00370 1275 aa14.5□□□□□ -0.09
CLK3-203ENST00000454830 SYF2O95926 243 aaKnown RBP14.5□□□□□ -0.09
CLK3-203ENST00000454830 HSPA6P17066 643 aa14.5□□□□□ -0.09
CLK3-203ENST00000454830 PEX5P50542 639 aa14.5□□□□□ -0.09
CLK3-203ENST00000454830 PRELID2Q8N945 189 aa14.5□□□□□ -0.09
CLK3-203ENST00000454830 OR2W6PQ8NHA6 318 aa14.5□□□□□ -0.09
CLK3-203ENST00000454830 FAM76AQ8TAV0 307 aa14.5□□□□□ -0.09
CLK3-203ENST00000454830 FEZF2Q8TBJ5 459 aa14.5□□□□□ -0.09
CLK3-203ENST00000454830 KATNBL1Q9H079 304 aa14.5□□□□□ -0.09
CLK3-203ENST00000454830 SMIM23A6NLE4 172 aa14.49□□□□□ -0.09
CLK3-203ENST00000454830 M0QYV0 167 aa14.49□□□□□ -0.09
CLK3-203ENST00000454830 PROSCO94903 275 aa14.49□□□□□ -0.09
CLK3-203ENST00000454830 CALB1P05937 261 aa14.49□□□□□ -0.09
CLK3-203ENST00000454830 RARAP10276 462 aa14.49□□□□□ -0.09
CLK3-203ENST00000454830 DENND1BQ6P3S1 775 aa14.49□□□□□ -0.09
CLK3-203ENST00000454830 UBA3Q8TBC4 463 aa14.49□□□□□ -0.09
CLK3-203ENST00000454830 NEUROG2Q9H2A3 272 aa14.49□□□□□ -0.09
CLK3-203ENST00000454830 CDHR5Q9HBB8 845 aa14.49□□□□□ -0.09
CLK3-203ENST00000454830 SIX4Q9UIU6 781 aa14.49□□□□□ -0.09
CLK3-203ENST00000454830 PLAAQ9Y263 795 aa14.49□□□□□ -0.09
CLK3-203ENST00000454830 RRN3P2A6NIE6 340 aa14.49□□□□□ -0.09
CLK3-203ENST00000454830 MTA2O94776 668 aa14.49□□□□□ -0.09
CLK3-203ENST00000454830 CHRNA3P32297 505 aa14.49□□□□□ -0.09
CLK3-203ENST00000454830 ASPAP45381 313 aa14.49□□□□□ -0.09
CLK3-203ENST00000454830 GSTA5Q7RTV2 222 aa14.49□□□□□ -0.09
CLK3-203ENST00000454830 FMO2Q99518 471 aa14.49□□□□□ -0.09
CLK3-203ENST00000454830 RABEP2Q9H5N1 569 aa14.49□□□□□ -0.09
CLK3-203ENST00000454830 FLRT1Q9NZU1 646 aa14.49□□□□□ -0.09
CLK3-203ENST00000454830 SNX9Q9Y5X1 595 aa14.49□□□□□ -0.09
CLK3-203ENST00000454830 MED7O43513 233 aa14.49□□□□□ -0.09
CLK3-203ENST00000454830 AKAP5P24588 427 aa14.49□□□□□ -0.09
CLK3-203ENST00000454830 PSMC1P62191 440 aaKnown RBP14.49□□□□□ -0.09
CLK3-203ENST00000454830 PLCB3Q01970 1234 aa14.49□□□□□ -0.09
CLK3-203ENST00000454830 MFSD10Q14728 455 aa14.49□□□□□ -0.09
CLK3-203ENST00000454830 ATP13A4Q4VNC1 1196 aa14.49□□□□□ -0.09
CLK3-203ENST00000454830 TTC19Q6DKK2 380 aaPredicted RBP14.49□□□□□ -0.09
CLK3-203ENST00000454830 RHOT1Q8IXI2 618 aa14.49□□□□□ -0.09
CLK3-203ENST00000454830 CAVIN3Q969G5 261 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms