RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 PRSS36Q5K4E3 855 aa17.79■□□□□ 0.44
NCKIPSD-208ENST00000454134 IQUBQ8NA54 791 aa17.79■□□□□ 0.44
NCKIPSD-208ENST00000454134 KCNG4Q8TDN1 519 aa17.79■□□□□ 0.44
NCKIPSD-208ENST00000454134 PYM1Q9BRP8 204 aaKnown RBP17.79■□□□□ 0.44
NCKIPSD-208ENST00000454134 CUEDC2Q9H467 287 aa17.79■□□□□ 0.44
NCKIPSD-208ENST00000454134 AVENQ9NQS1 362 aaPredicted RBP17.79■□□□□ 0.44
NCKIPSD-208ENST00000454134 RBAKQ9NYW8 714 aaPredicted RBP17.79■□□□□ 0.44
NCKIPSD-208ENST00000454134 PCDHA7Q9UN72 937 aa17.79■□□□□ 0.44
NCKIPSD-208ENST00000454134 YIPF1Q9Y548 306 aa17.79■□□□□ 0.44
NCKIPSD-208ENST00000454134 TSC2P49815 1807 aa17.78■□□□□ 0.44
NCKIPSD-208ENST00000454134 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.78■□□□□ 0.44
NCKIPSD-208ENST00000454134 CYB561D2O14569 222 aa17.78■□□□□ 0.44
NCKIPSD-208ENST00000454134 PDIA4P13667 645 aaKnown RBP17.78■□□□□ 0.44
NCKIPSD-208ENST00000454134 AOC1P19801 751 aa17.78■□□□□ 0.44
NCKIPSD-208ENST00000454134 GARTP22102 1010 aa17.78■□□□□ 0.44
NCKIPSD-208ENST00000454134 CASP1P29466 404 aa17.78■□□□□ 0.44
NCKIPSD-208ENST00000454134 MRE11P49959 708 aa17.78■□□□□ 0.44
NCKIPSD-208ENST00000454134 TFAMQ00059 246 aaKnown RBP17.78■□□□□ 0.44
NCKIPSD-208ENST00000454134 GPR17Q13304 367 aa17.78■□□□□ 0.44
NCKIPSD-208ENST00000454134 SCARA3Q6AZY7 606 aa17.78■□□□□ 0.44
NCKIPSD-208ENST00000454134 IQCEQ6IPM2 695 aa17.78■□□□□ 0.44
NCKIPSD-208ENST00000454134 ARMCX5Q6P1M9 558 aa17.78■□□□□ 0.44
NCKIPSD-208ENST00000454134 PDZD4Q76G19 769 aaPredicted RBP17.78■□□□□ 0.44
NCKIPSD-208ENST00000454134 BRSK2Q8IWQ3 736 aa17.78■□□□□ 0.44
NCKIPSD-208ENST00000454134 ELMOD1Q8N336 334 aa17.78■□□□□ 0.44
NCKIPSD-208ENST00000454134 TTC9BQ8N6N2 239 aa17.78■□□□□ 0.44
NCKIPSD-208ENST00000454134 ATAD1Q8NBU5 361 aa17.78■□□□□ 0.44
NCKIPSD-208ENST00000454134 OR10T2Q8NGX3 314 aa17.78■□□□□ 0.44
NCKIPSD-208ENST00000454134 ZNF512Q96ME7 567 aaPredicted RBP17.78■□□□□ 0.44
NCKIPSD-208ENST00000454134 OXCT2Q9BYC2 517 aaPredicted RBP17.78■□□□□ 0.44
NCKIPSD-208ENST00000454134 LRRC27Q9C0I9 530 aa17.78■□□□□ 0.44
NCKIPSD-208ENST00000454134 TMEM206Q9H813 350 aa17.78■□□□□ 0.44
NCKIPSD-208ENST00000454134 SLC2A4RGQ9NR83 387 aa17.78■□□□□ 0.44
NCKIPSD-208ENST00000454134 MAFFQ9ULX9 164 aa17.78■□□□□ 0.44
NCKIPSD-208ENST00000454134 SLC27A5Q9Y2P5 690 aa17.78■□□□□ 0.44
NCKIPSD-208ENST00000454134 EXTL3O43909 919 aa17.77■□□□□ 0.44
NCKIPSD-208ENST00000454134 SOAT2O75908 522 aa17.77■□□□□ 0.44
NCKIPSD-208ENST00000454134 CYP11A1P05108 521 aa17.77■□□□□ 0.44
NCKIPSD-208ENST00000454134 MYL4P12829 197 aa17.77■□□□□ 0.44
NCKIPSD-208ENST00000454134 GJA1P17302 382 aa17.77■□□□□ 0.44
NCKIPSD-208ENST00000454134 RFX1P22670 979 aa17.77■□□□□ 0.44
NCKIPSD-208ENST00000454134 HOXD13P35453 343 aa17.77■□□□□ 0.44
NCKIPSD-208ENST00000454134 TAF6P49848 677 aa17.77■□□□□ 0.44
NCKIPSD-208ENST00000454134 AMPD3Q01432 767 aa17.77■□□□□ 0.44
NCKIPSD-208ENST00000454134 MYBPC2Q14324 1141 aa17.77■□□□□ 0.44
NCKIPSD-208ENST00000454134 CYP4A22Q5TCH4 519 aa17.77■□□□□ 0.44
NCKIPSD-208ENST00000454134 CHAMP1Q96JM3 812 aa17.77■□□□□ 0.44
NCKIPSD-208ENST00000454134 RTP3Q9BQQ7 232 aa17.77■□□□□ 0.44
NCKIPSD-208ENST00000454134 PLA2G2FQ9BZM2 168 aa17.77■□□□□ 0.44
NCKIPSD-208ENST00000454134 BLZF1Q9H2G9 400 aa17.77■□□□□ 0.44
NCKIPSD-208ENST00000454134 TBC1D17Q9HA65 648 aa17.77■□□□□ 0.44
NCKIPSD-208ENST00000454134 ARHGEF3Q9NR81 526 aa17.77■□□□□ 0.44
NCKIPSD-208ENST00000454134 GDE1Q9NZC3 331 aa17.77■□□□□ 0.44
NCKIPSD-208ENST00000454134 MTMR11A4FU01 709 aa17.76■□□□□ 0.43
NCKIPSD-208ENST00000454134 ZNF197O14709 1029 aa17.76■□□□□ 0.43
NCKIPSD-208ENST00000454134 LDHAP00338 332 aaKnown RBP17.76■□□□□ 0.43
NCKIPSD-208ENST00000454134 ITGB3P05106 788 aa17.76■□□□□ 0.43
NCKIPSD-208ENST00000454134 PAX3P23760 479 aa17.76■□□□□ 0.43
NCKIPSD-208ENST00000454134 POLR2BP30876 1174 aaKnown RBP17.76■□□□□ 0.43
NCKIPSD-208ENST00000454134 NUBP1P53384 320 aa17.76■□□□□ 0.43
NCKIPSD-208ENST00000454134 RESP18Q5W5W9 173 aa17.76■□□□□ 0.43
NCKIPSD-208ENST00000454134 WSCD1Q658N2 575 aa17.76■□□□□ 0.43
NCKIPSD-208ENST00000454134 TANGO2Q6ICL3 276 aa17.76■□□□□ 0.43
NCKIPSD-208ENST00000454134 CENPPQ6IPU0 288 aa17.76■□□□□ 0.43
NCKIPSD-208ENST00000454134 STXBP4Q6ZWJ1 553 aa17.76■□□□□ 0.43
NCKIPSD-208ENST00000454134 METTL23Q86XA0 190 aa17.76■□□□□ 0.43
NCKIPSD-208ENST00000454134 NT5DC4Q86YG4 428 aa17.76■□□□□ 0.43
NCKIPSD-208ENST00000454134 C1orf127Q8N9H9 656 aa17.76■□□□□ 0.43
NCKIPSD-208ENST00000454134 ATOH1Q92858 354 aaPredicted RBP17.76■□□□□ 0.43
NCKIPSD-208ENST00000454134 BORCS6Q96GS4 357 aa17.76■□□□□ 0.43
NCKIPSD-208ENST00000454134 ZSWIM3Q96MP5 696 aa17.76■□□□□ 0.43
NCKIPSD-208ENST00000454134 C7orf25Q9BPX7 421 aa17.76■□□□□ 0.43
NCKIPSD-208ENST00000454134 PDE11AQ9HCR9 933 aa17.76■□□□□ 0.43
NCKIPSD-208ENST00000454134 FAM13BQ9NYF5 915 aa17.76■□□□□ 0.43
NCKIPSD-208ENST00000454134 CFAP45Q9UL16 551 aa17.76■□□□□ 0.43
NCKIPSD-208ENST00000454134 AGAP1Q9UPQ3 857 aa17.76■□□□□ 0.43
NCKIPSD-208ENST00000454134 COL4A3Q01955 1670 aa17.75■□□□□ 0.43
NCKIPSD-208ENST00000454134 KPNA7A9QM74 516 aa17.75■□□□□ 0.43
NCKIPSD-208ENST00000454134 MOSPD3O75425 235 aa17.75■□□□□ 0.43
NCKIPSD-208ENST00000454134 AFMP43652 599 aa17.75■□□□□ 0.43
NCKIPSD-208ENST00000454134 SNW1Q13573 536 aaKnown RBP17.75■□□□□ 0.43
NCKIPSD-208ENST00000454134 SV2CQ496J9 727 aa17.75■□□□□ 0.43
NCKIPSD-208ENST00000454134 SLC39A12Q504Y0 691 aa17.75■□□□□ 0.43
NCKIPSD-208ENST00000454134 FAM78AQ5JUQ0 283 aa17.75■□□□□ 0.43
NCKIPSD-208ENST00000454134 FAM26FQ5R3K3 315 aa17.75■□□□□ 0.43
NCKIPSD-208ENST00000454134 ATL3Q6DD88 541 aa17.75■□□□□ 0.43
NCKIPSD-208ENST00000454134 CNNM4Q6P4Q7 775 aa17.75■□□□□ 0.43
NCKIPSD-208ENST00000454134 GPD1LQ8N335 351 aa17.75■□□□□ 0.43
NCKIPSD-208ENST00000454134 DNAJC25Q9H1X3 360 aa17.75■□□□□ 0.43
NCKIPSD-208ENST00000454134 ASAH2Q9NR71 780 aa17.75■□□□□ 0.43
NCKIPSD-208ENST00000454134 RCOR1Q9UKL0 485 aa17.75■□□□□ 0.43
NCKIPSD-208ENST00000454134 DSEQ9UL01 958 aa17.75■□□□□ 0.43
NCKIPSD-208ENST00000454134 TCHHQ07283 1943 aa17.74■□□□□ 0.43
NCKIPSD-208ENST00000454134 ECI2O75521 394 aa17.74■□□□□ 0.43
NCKIPSD-208ENST00000454134 FCARP24071 287 aa17.74■□□□□ 0.43
NCKIPSD-208ENST00000454134 ALDH1A3P47895 512 aa17.74■□□□□ 0.43
NCKIPSD-208ENST00000454134 EPHB3P54753 998 aa17.74■□□□□ 0.43
NCKIPSD-208ENST00000454134 EPHA5P54756 1037 aa17.74■□□□□ 0.43
NCKIPSD-208ENST00000454134 TEAD2Q15562 447 aa17.74■□□□□ 0.43
NCKIPSD-208ENST00000454134 LMBRD2Q68DH5 695 aaPredicted RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms