RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 NBPF8Q3BBV2 869 aa4.93□□□□□ -1.62
HMGN3P1-201ENST00000453847 CRB2Q5IJ48 1285 aa4.93□□□□□ -1.62
HMGN3P1-201ENST00000453847 FBXO47Q5MNV8 452 aa4.93□□□□□ -1.62
HMGN3P1-201ENST00000453847 TMTC4Q5T4D3 741 aa4.93□□□□□ -1.62
HMGN3P1-201ENST00000453847 RAP1GAP2Q684P5 730 aa4.93□□□□□ -1.62
HMGN3P1-201ENST00000453847 FAM180BQ6P0A1 224 aa4.93□□□□□ -1.62
HMGN3P1-201ENST00000453847 KRT28Q7Z3Y7 464 aa4.93□□□□□ -1.62
HMGN3P1-201ENST00000453847 RTKN2Q8IZC4 609 aa4.93□□□□□ -1.62
HMGN3P1-201ENST00000453847 ABI1Q8IZP0 508 aa4.93□□□□□ -1.62
HMGN3P1-201ENST00000453847 MZB1Q8WU39 189 aa4.93□□□□□ -1.62
HMGN3P1-201ENST00000453847 ZBTB8AQ96BR9 441 aa4.93□□□□□ -1.62
HMGN3P1-201ENST00000453847 MRI1Q9BV20 369 aa4.93□□□□□ -1.62
HMGN3P1-201ENST00000453847 CNPPD1Q9BV87 410 aa4.93□□□□□ -1.62
HMGN3P1-201ENST00000453847 KATNAL1Q9BW62 490 aa4.93□□□□□ -1.62
HMGN3P1-201ENST00000453847 STK31Q9BXU1 1019 aa4.93□□□□□ -1.62
HMGN3P1-201ENST00000453847 BRD9Q9H8M2 597 aa4.93□□□□□ -1.62
HMGN3P1-201ENST00000453847 GPR35Q9HC97 309 aa4.93□□□□□ -1.62
HMGN3P1-201ENST00000453847 ALG13Q9NP73 1137 aaKnown RBP4.93□□□□□ -1.62
HMGN3P1-201ENST00000453847 CAPN11Q9UMQ6 739 aa4.93□□□□□ -1.62
HMGN3P1-201ENST00000453847 ZNF503-AS2A6NEH8 195 aa4.92□□□□□ -1.62
HMGN3P1-201ENST00000453847 VSIG10L2P0DP72 767 aa4.92□□□□□ -1.62
HMGN3P1-201ENST00000453847 RAP2AP10114 183 aa4.92□□□□□ -1.62
HMGN3P1-201ENST00000453847 RARBP10826 455 aa4.92□□□□□ -1.62
HMGN3P1-201ENST00000453847 MTHFD1P11586 935 aaKnown RBP4.92□□□□□ -1.62
HMGN3P1-201ENST00000453847 ATP1A3P13637 1013 aa4.92□□□□□ -1.62
HMGN3P1-201ENST00000453847 FDXRP22570 491 aa4.92□□□□□ -1.62
HMGN3P1-201ENST00000453847 LIMS1P48059 325 aa4.92□□□□□ -1.62
HMGN3P1-201ENST00000453847 PSMC1P62191 440 aaKnown RBP4.92□□□□□ -1.62
HMGN3P1-201ENST00000453847 DLX2Q07687 328 aaPredicted RBP4.92□□□□□ -1.62
HMGN3P1-201ENST00000453847 GRM1Q13255 1194 aa4.92□□□□□ -1.62
HMGN3P1-201ENST00000453847 RAB32Q13637 225 aa4.92□□□□□ -1.62
HMGN3P1-201ENST00000453847 HABP2Q14520 560 aaPredicted RBP4.92□□□□□ -1.62
HMGN3P1-201ENST00000453847 NPY5RQ15761 445 aa4.92□□□□□ -1.62
HMGN3P1-201ENST00000453847 CSRP2Q16527 193 aa4.92□□□□□ -1.62
HMGN3P1-201ENST00000453847 GPATCH4Q5T3I0 446 aaKnown RBP4.92□□□□□ -1.62
HMGN3P1-201ENST00000453847 ANKS6Q68DC2 871 aa4.92□□□□□ -1.62
HMGN3P1-201ENST00000453847 LMBRD2Q68DH5 695 aaPredicted RBP4.92□□□□□ -1.62
HMGN3P1-201ENST00000453847 FCRL6Q6DN72 434 aa4.92□□□□□ -1.62
HMGN3P1-201ENST00000453847 C16orf54Q6UWD8 224 aa4.92□□□□□ -1.62
HMGN3P1-201ENST00000453847 KRBA2Q6ZNG9 492 aa4.92□□□□□ -1.62
HMGN3P1-201ENST00000453847 Q6ZUG5 572 aa4.92□□□□□ -1.62
HMGN3P1-201ENST00000453847 CBLL1Q75N03 491 aa4.92□□□□□ -1.62
HMGN3P1-201ENST00000453847 UBE3BQ7Z3V4 1068 aa4.92□□□□□ -1.62
HMGN3P1-201ENST00000453847 ADGRE4PQ86SQ3 457 aa4.92□□□□□ -1.62
HMGN3P1-201ENST00000453847 LRRTM4Q86VH4 590 aa4.92□□□□□ -1.62
HMGN3P1-201ENST00000453847 SDR16C5Q8N3Y7 309 aa4.92□□□□□ -1.62
HMGN3P1-201ENST00000453847 ESX1Q8N693 406 aa4.92□□□□□ -1.62
HMGN3P1-201ENST00000453847 SPPL3Q8TCT6 385 aa4.92□□□□□ -1.62
HMGN3P1-201ENST00000453847 HERVK_113Q902F9 699 aa4.92□□□□□ -1.62
HMGN3P1-201ENST00000453847 LTV1Q96GA3 475 aaPredicted RBP4.92□□□□□ -1.62
HMGN3P1-201ENST00000453847 AJUBAQ96IF1 538 aa4.92□□□□□ -1.62
HMGN3P1-201ENST00000453847 WRNIP1Q96S55 665 aa4.92□□□□□ -1.62
HMGN3P1-201ENST00000453847 GPHA2Q96T91 129 aa4.92□□□□□ -1.62
HMGN3P1-201ENST00000453847 SGPP1Q9BX95 441 aa4.92□□□□□ -1.62
HMGN3P1-201ENST00000453847 EIF2AQ9BY44 585 aaKnown RBP4.92□□□□□ -1.62
HMGN3P1-201ENST00000453847 DHX36Q9H2U1 1008 aaKnown RBP4.92□□□□□ -1.62
HMGN3P1-201ENST00000453847 GCM1Q9NP62 436 aa4.92□□□□□ -1.62
HMGN3P1-201ENST00000453847 FBXO34Q9NWN3 711 aa4.92□□□□□ -1.62
HMGN3P1-201ENST00000453847 MOCS1Q9NZB8 636 aa4.92□□□□□ -1.62
HMGN3P1-201ENST00000453847 JKAMPQ9P055 326 aa4.92□□□□□ -1.62
HMGN3P1-201ENST00000453847 ZNF212Q9UDV6 495 aa4.92□□□□□ -1.62
HMGN3P1-201ENST00000453847 DYTNA2CJ06 578 aa4.91□□□□□ -1.62
HMGN3P1-201ENST00000453847 E9PLN8 166 aa4.91□□□□□ -1.62
HMGN3P1-201ENST00000453847 KIAA0391O15091 583 aaKnown RBP4.91□□□□□ -1.62
HMGN3P1-201ENST00000453847 ASNA1O43681 348 aa4.91□□□□□ -1.62
HMGN3P1-201ENST00000453847 MBD4O95243 580 aa4.91□□□□□ -1.62
HMGN3P1-201ENST00000453847 GYS1P13807 737 aa4.91□□□□□ -1.62
HMGN3P1-201ENST00000453847 JUPP14923 745 aa4.91□□□□□ -1.62
HMGN3P1-201ENST00000453847 KLRC1P26715 233 aa4.91□□□□□ -1.62
HMGN3P1-201ENST00000453847 IL1R2P27930 398 aa4.91□□□□□ -1.62
HMGN3P1-201ENST00000453847 CSF2RBP32927 897 aa4.91□□□□□ -1.62
HMGN3P1-201ENST00000453847 COPAP53621 1224 aa4.91□□□□□ -1.62
HMGN3P1-201ENST00000453847 SEC24CP53992 1094 aa4.91□□□□□ -1.62
HMGN3P1-201ENST00000453847 BPIFB4P59827 614 aa4.91□□□□□ -1.62
HMGN3P1-201ENST00000453847 APBA1Q02410 837 aa4.91□□□□□ -1.62
HMGN3P1-201ENST00000453847 BOP1Q14137 746 aaKnown RBP4.91□□□□□ -1.62
HMGN3P1-201ENST00000453847 KCTD2Q14681 263 aa4.91□□□□□ -1.62
HMGN3P1-201ENST00000453847 CFAP161Q6P656 301 aa4.91□□□□□ -1.62
HMGN3P1-201ENST00000453847 FBXO38Q6PIJ6 1188 aa4.91□□□□□ -1.62
HMGN3P1-201ENST00000453847 ZNF365Q70YC5 407 aa4.91□□□□□ -1.62
HMGN3P1-201ENST00000453847 RSRC2Q7L4I2 434 aaKnown RBP4.91□□□□□ -1.62
HMGN3P1-201ENST00000453847 USP37Q86T82 979 aa4.91□□□□□ -1.62
HMGN3P1-201ENST00000453847 ATG4DQ86TL0 474 aaPredicted RBP4.91□□□□□ -1.62
HMGN3P1-201ENST00000453847 HEATR4Q86WZ0 1026 aa4.91□□□□□ -1.62
HMGN3P1-201ENST00000453847 FTSJ3Q8IY81 847 aaKnown RBP4.91□□□□□ -1.62
HMGN3P1-201ENST00000453847 TMEFF1Q8IYR6 380 aa4.91□□□□□ -1.62
HMGN3P1-201ENST00000453847 TMTC2Q8N394 836 aa4.91□□□□□ -1.62
HMGN3P1-201ENST00000453847 MPP5Q8N3R9 675 aa4.91□□□□□ -1.62
HMGN3P1-201ENST00000453847 SLC7A6OSQ96CW6 309 aaPredicted RBP4.91□□□□□ -1.62
HMGN3P1-201ENST00000453847 MAELQ96JY0 434 aaKnown RBP4.91□□□□□ -1.62
HMGN3P1-201ENST00000453847 SNX27Q96L92 541 aa4.91□□□□□ -1.62
HMGN3P1-201ENST00000453847 YTHDC1Q96MU7 727 aaKnown RBP4.91□□□□□ -1.62
HMGN3P1-201ENST00000453847 SEC62Q99442 399 aaKnown RBP4.91□□□□□ -1.62
HMGN3P1-201ENST00000453847 VKORC1Q9BQB6 163 aa4.91□□□□□ -1.62
HMGN3P1-201ENST00000453847 SPATA25Q9BR10 227 aa4.91□□□□□ -1.62
HMGN3P1-201ENST00000453847 DDX23Q9BUQ8 820 aaKnown RBP4.91□□□□□ -1.62
HMGN3P1-201ENST00000453847 MAGEB5Q9BZ81 275 aa4.91□□□□□ -1.62
HMGN3P1-201ENST00000453847 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.91□□□□□ -1.62
HMGN3P1-201ENST00000453847 MCOLN1Q9GZU1 580 aa4.91□□□□□ -1.62
HMGN3P1-201ENST00000453847 RIC8AQ9NPQ8 531 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms