RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 CASP5P51878 434 aa13.94□□□□□ -0.18
CHD3-206ENST00000452447 AMPD3Q01432 767 aa13.94□□□□□ -0.18
CHD3-206ENST00000452447 PFKPQ01813 784 aa13.94□□□□□ -0.18
CHD3-206ENST00000452447 DUSP4Q13115 394 aa13.94□□□□□ -0.18
CHD3-206ENST00000452447 GPR17Q13304 367 aa13.94□□□□□ -0.18
CHD3-206ENST00000452447 MYBPC2Q14324 1141 aa13.94□□□□□ -0.18
CHD3-206ENST00000452447 FOXD4L6Q3SYB3 417 aaPredicted RBP13.94□□□□□ -0.18
CHD3-206ENST00000452447 PHLDB3Q6NSJ2 640 aa13.94□□□□□ -0.18
CHD3-206ENST00000452447 CRELD2Q6UXH1 353 aaPredicted RBP13.94□□□□□ -0.18
CHD3-206ENST00000452447 FOXD4L3Q6VB84 417 aaPredicted RBP13.94□□□□□ -0.18
CHD3-206ENST00000452447 STXBP4Q6ZWJ1 553 aa13.94□□□□□ -0.18
CHD3-206ENST00000452447 CCDC105Q8IYK2 499 aa13.94□□□□□ -0.18
CHD3-206ENST00000452447 LEMD2Q8NC56 503 aa13.94□□□□□ -0.18
CHD3-206ENST00000452447 SAAL1Q96ER3 474 aa13.94□□□□□ -0.18
CHD3-206ENST00000452447 TNMDQ9H2S6 317 aa13.94□□□□□ -0.18
CHD3-206ENST00000452447 CUEDC2Q9H467 287 aa13.94□□□□□ -0.18
CHD3-206ENST00000452447 ASAH2Q9NR71 780 aa13.94□□□□□ -0.18
CHD3-206ENST00000452447 CUTAO60888 179 aa13.93□□□□□ -0.18
CHD3-206ENST00000452447 ECI2O75521 394 aa13.93□□□□□ -0.18
CHD3-206ENST00000452447 MICAL2O94851 1124 aa13.93□□□□□ -0.18
CHD3-206ENST00000452447 ZSCAN22P10073 491 aaPredicted RBP13.93□□□□□ -0.18
CHD3-206ENST00000452447 MYL4P12829 197 aa13.93□□□□□ -0.18
CHD3-206ENST00000452447 GARTP22102 1010 aa13.93□□□□□ -0.18
CHD3-206ENST00000452447 ALDH1A3P47895 512 aa13.93□□□□□ -0.18
CHD3-206ENST00000452447 TFAMQ00059 246 aaKnown RBP13.93□□□□□ -0.18
CHD3-206ENST00000452447 SNW1Q13573 536 aaKnown RBP13.93□□□□□ -0.18
CHD3-206ENST00000452447 PRSS36Q5K4E3 855 aa13.93□□□□□ -0.18
CHD3-206ENST00000452447 METTL23Q86XA0 190 aa13.93□□□□□ -0.18
CHD3-206ENST00000452447 THEM5Q8N1Q8 247 aa13.93□□□□□ -0.18
CHD3-206ENST00000452447 IQUBQ8NA54 791 aa13.93□□□□□ -0.18
CHD3-206ENST00000452447 DTWD2Q8NBA8 298 aa13.93□□□□□ -0.18
CHD3-206ENST00000452447 NOC3LQ8WTT2 800 aaKnown RBP13.93□□□□□ -0.18
CHD3-206ENST00000452447 TCEAL4Q96EI5 215 aa13.93□□□□□ -0.18
CHD3-206ENST00000452447 PYM1Q9BRP8 204 aaKnown RBP13.93□□□□□ -0.18
CHD3-206ENST00000452447 CEP72Q9P209 647 aa13.93□□□□□ -0.18
CHD3-206ENST00000452447 SIT1Q9Y3P8 196 aa13.93□□□□□ -0.18
CHD3-206ENST00000452447 YIPF1Q9Y548 306 aa13.93□□□□□ -0.18
CHD3-206ENST00000452447 MIA3Q5JRA6 1907 aa13.93□□□□□ -0.18
CHD3-206ENST00000452447 CYB561D2O14569 222 aa13.92□□□□□ -0.18
CHD3-206ENST00000452447 CYP11A1P05108 521 aa13.92□□□□□ -0.18
CHD3-206ENST00000452447 EPHB3P54753 998 aa13.92□□□□□ -0.18
CHD3-206ENST00000452447 SV2CQ496J9 727 aa13.92□□□□□ -0.18
CHD3-206ENST00000452447 CENPPQ6IPU0 288 aa13.92□□□□□ -0.18
CHD3-206ENST00000452447 BRSK2Q8IWQ3 736 aa13.92□□□□□ -0.18
CHD3-206ENST00000452447 EFCAB13Q8IY85 973 aa13.92□□□□□ -0.18
CHD3-206ENST00000452447 HS6ST3Q8IZP7 471 aa13.92□□□□□ -0.18
CHD3-206ENST00000452447 CACTINQ8WUQ7 758 aaKnown RBP13.92□□□□□ -0.18
CHD3-206ENST00000452447 DHX58Q96C10 678 aa13.92□□□□□ -0.18
CHD3-206ENST00000452447 ZFP14Q9HCL3 533 aa13.92□□□□□ -0.18
CHD3-206ENST00000452447 KBTBD4Q9NVX7 518 aa13.92□□□□□ -0.18
CHD3-206ENST00000452447 RBAKQ9NYW8 714 aaPredicted RBP13.92□□□□□ -0.18
CHD3-206ENST00000452447 SLC27A5Q9Y2P5 690 aa13.92□□□□□ -0.18
CHD3-206ENST00000452447 CFAP54Q96N23 3096 aa13.92□□□□□ -0.18
CHD3-206ENST00000452447 MTMR11A4FU01 709 aa13.92□□□□□ -0.18
CHD3-206ENST00000452447 EXTL3O43909 919 aa13.92□□□□□ -0.18
CHD3-206ENST00000452447 PRPF6O94906 941 aaKnown RBP13.92□□□□□ -0.18
CHD3-206ENST00000452447 VNN2O95498 520 aa13.92□□□□□ -0.18
CHD3-206ENST00000452447 F13A1P00488 732 aa13.92□□□□□ -0.18
CHD3-206ENST00000452447 PNPLA4P41247 253 aa13.92□□□□□ -0.18
CHD3-206ENST00000452447 CCR2P41597 374 aa13.92□□□□□ -0.18
CHD3-206ENST00000452447 STARD6P59095 220 aa13.92□□□□□ -0.18
CHD3-206ENST00000452447 PRKCQQ04759 706 aa13.92□□□□□ -0.18
CHD3-206ENST00000452447 ANGPT1Q15389 498 aa13.92□□□□□ -0.18
CHD3-206ENST00000452447 MLF2Q15773 248 aaPredicted RBP13.92□□□□□ -0.18
CHD3-206ENST00000452447 E2F4Q16254 413 aa13.92□□□□□ -0.18
CHD3-206ENST00000452447 SLC44A4Q53GD3 710 aa13.92□□□□□ -0.18
CHD3-206ENST00000452447 TANGO2Q6ICL3 276 aa13.92□□□□□ -0.18
CHD3-206ENST00000452447 ATAD1Q8NBU5 361 aa13.92□□□□□ -0.18
CHD3-206ENST00000452447 SPRYD3Q8NCJ5 442 aa13.92□□□□□ -0.18
CHD3-206ENST00000452447 KCNG4Q8TDN1 519 aa13.92□□□□□ -0.18
CHD3-206ENST00000452447 ELSPBP1Q96BH3 223 aa13.92□□□□□ -0.18
CHD3-206ENST00000452447 ZNF560Q96MR9 790 aa13.92□□□□□ -0.18
CHD3-206ENST00000452447 CBWD1Q9BRT8 395 aa13.92□□□□□ -0.18
CHD3-206ENST00000452447 FGFBP2Q9BYJ0 223 aa13.92□□□□□ -0.18
CHD3-206ENST00000452447 TRIM9Q9C026 710 aa13.92□□□□□ -0.18
CHD3-206ENST00000452447 PCIF1Q9H4Z3 704 aa13.92□□□□□ -0.18
CHD3-206ENST00000452447 SLITRK6Q9H5Y7 841 aa13.92□□□□□ -0.18
CHD3-206ENST00000452447 CFAP45Q9UL16 551 aa13.92□□□□□ -0.18
CHD3-206ENST00000452447 TSC2P49815 1807 aa13.91□□□□□ -0.18
CHD3-206ENST00000452447 WDR87Q6ZQQ6 2873 aa13.91□□□□□ -0.18
CHD3-206ENST00000452447 GOLGA8IPA6NC78 632 aa13.91□□□□□ -0.18
CHD3-206ENST00000452447 GOLGA8JA6NMD2 632 aa13.91□□□□□ -0.18
CHD3-206ENST00000452447 KPNA7A9QM74 516 aa13.91□□□□□ -0.18
CHD3-206ENST00000452447 KIAA0391O15091 583 aaKnown RBP13.91□□□□□ -0.18
CHD3-206ENST00000452447 GFRA3O60609 400 aa13.91□□□□□ -0.18
CHD3-206ENST00000452447 DCNP07585 359 aaKnown RBP13.91□□□□□ -0.18
CHD3-206ENST00000452447 ME1P48163 572 aa13.91□□□□□ -0.18
CHD3-206ENST00000452447 TUFMP49411 452 aaKnown RBP13.91□□□□□ -0.18
CHD3-206ENST00000452447 EPHA5P54756 1037 aa13.91□□□□□ -0.18
CHD3-206ENST00000452447 ASIC1P78348 528 aa13.91□□□□□ -0.18
CHD3-206ENST00000452447 SLC39A12Q504Y0 691 aa13.91□□□□□ -0.18
CHD3-206ENST00000452447 FAM78AQ5JUQ0 283 aa13.91□□□□□ -0.18
CHD3-206ENST00000452447 SHC4Q6S5L8 630 aa13.91□□□□□ -0.18
CHD3-206ENST00000452447 ZSWIM2Q8NEG5 633 aa13.91□□□□□ -0.18
CHD3-206ENST00000452447 PJA1Q8NG27 643 aa13.91□□□□□ -0.18
CHD3-206ENST00000452447 OR10T2Q8NGX3 314 aa13.91□□□□□ -0.18
CHD3-206ENST00000452447 ASB16Q96NS5 453 aa13.91□□□□□ -0.18
CHD3-206ENST00000452447 TMEM209Q96SK2 561 aa13.91□□□□□ -0.18
CHD3-206ENST00000452447 PLA2G2FQ9BZM2 168 aa13.91□□□□□ -0.18
CHD3-206ENST00000452447 GPR88Q9GZN0 384 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms