RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 NT5DC4Q86YG4 428 aa13.38□□□□□ -0.27
MSH5-209ENST00000450148 HSCBQ8IWL3 235 aa13.38□□□□□ -0.27
MSH5-209ENST00000450148 BRSK2Q8IWQ3 736 aa13.38□□□□□ -0.27
MSH5-209ENST00000450148 OR10T2Q8NGX3 314 aa13.38□□□□□ -0.27
MSH5-209ENST00000450148 CXorf38Q8TB03 319 aa13.38□□□□□ -0.27
MSH5-209ENST00000450148 HPS3Q969F9 1004 aa13.38□□□□□ -0.27
MSH5-209ENST00000450148 SAAL1Q96ER3 474 aa13.38□□□□□ -0.27
MSH5-209ENST00000450148 KXD1Q9BQD3 176 aa13.38□□□□□ -0.27
MSH5-209ENST00000450148 CBWD1Q9BRT8 395 aa13.38□□□□□ -0.27
MSH5-209ENST00000450148 TRIM9Q9C026 710 aa13.38□□□□□ -0.27
MSH5-209ENST00000450148 ARHGEF3Q9NR81 526 aa13.38□□□□□ -0.27
MSH5-209ENST00000450148 DPP3Q9NY33 737 aa13.38□□□□□ -0.27
MSH5-209ENST00000450148 GDE1Q9NZC3 331 aa13.38□□□□□ -0.27
MSH5-209ENST00000450148 EXOC7Q9UPT5 735 aa13.38□□□□□ -0.27
MSH5-209ENST00000450148 YIPF1Q9Y548 306 aa13.38□□□□□ -0.27
MSH5-209ENST00000450148 PCDHB13Q9Y5F0 798 aa13.38□□□□□ -0.27
MSH5-209ENST00000450148 FANCMQ8IYD8 2048 aa13.38□□□□□ -0.27
MSH5-209ENST00000450148 IL18RAPO95256 599 aa13.37□□□□□ -0.27
MSH5-209ENST00000450148 ODC1P11926 461 aa13.37□□□□□ -0.27
MSH5-209ENST00000450148 PDIA4P13667 645 aaKnown RBP13.37□□□□□ -0.27
MSH5-209ENST00000450148 STARD6P59095 220 aa13.37□□□□□ -0.27
MSH5-209ENST00000450148 EHHADHQ08426 723 aa13.37□□□□□ -0.27
MSH5-209ENST00000450148 DUSP4Q13115 394 aa13.37□□□□□ -0.27
MSH5-209ENST00000450148 CENPPQ6IPU0 288 aa13.37□□□□□ -0.27
MSH5-209ENST00000450148 USP37Q86T82 979 aa13.37□□□□□ -0.27
MSH5-209ENST00000450148 TMC8Q8IU68 726 aa13.37□□□□□ -0.27
MSH5-209ENST00000450148 CCDC65Q8IXS2 484 aa13.37□□□□□ -0.27
MSH5-209ENST00000450148 CCDC105Q8IYK2 499 aa13.37□□□□□ -0.27
MSH5-209ENST00000450148 TTC9BQ8N6N2 239 aa13.37□□□□□ -0.27
MSH5-209ENST00000450148 FAM84AQ96KN4 292 aa13.37□□□□□ -0.27
MSH5-209ENST00000450148 PGLYRP2Q96PD5 576 aa13.37□□□□□ -0.27
MSH5-209ENST00000450148 FAM213AQ9BRX8 229 aa13.37□□□□□ -0.27
MSH5-209ENST00000450148 CUEDC2Q9H467 287 aa13.37□□□□□ -0.27
MSH5-209ENST00000450148 TBC1D17Q9HA65 648 aa13.37□□□□□ -0.27
MSH5-209ENST00000450148 DLGAP2Q9P1A6 1054 aa13.37□□□□□ -0.27
MSH5-209ENST00000450148 PCDHA7Q9UN72 937 aa13.37□□□□□ -0.27
MSH5-209ENST00000450148 CACNA1IQ9P0X4 2223 aa13.37□□□□□ -0.27
MSH5-209ENST00000450148 OBSL1O75147 1896 aa13.37□□□□□ -0.27
MSH5-209ENST00000450148 NUP210Q8TEM1 1887 aaPredicted RBP13.37□□□□□ -0.27
MSH5-209ENST00000450148 PATJQ8NI35 1801 aa13.36□□□□□ -0.27
MSH5-209ENST00000450148 GOLGA8IPA6NC78 632 aa13.36□□□□□ -0.27
MSH5-209ENST00000450148 SHISA7A6NL88 538 aa13.36□□□□□ -0.27
MSH5-209ENST00000450148 GOLGA8JA6NMD2 632 aa13.36□□□□□ -0.27
MSH5-209ENST00000450148 ECI2O75521 394 aa13.36□□□□□ -0.27
MSH5-209ENST00000450148 LDHAP00338 332 aaKnown RBP13.36□□□□□ -0.27
MSH5-209ENST00000450148 TAF6P49848 677 aa13.36□□□□□ -0.27
MSH5-209ENST00000450148 FOXD4L6Q3SYB3 417 aaPredicted RBP13.36□□□□□ -0.27
MSH5-209ENST00000450148 TANGO2Q6ICL3 276 aa13.36□□□□□ -0.27
MSH5-209ENST00000450148 FOXD4L3Q6VB84 417 aaPredicted RBP13.36□□□□□ -0.27
MSH5-209ENST00000450148 EPM2AIP1Q7L775 607 aaPredicted RBP13.36□□□□□ -0.27
MSH5-209ENST00000450148 C1orf127Q8N9H9 656 aa13.36□□□□□ -0.27
MSH5-209ENST00000450148 ATAD1Q8NBU5 361 aa13.36□□□□□ -0.27
MSH5-209ENST00000450148 DHX58Q96C10 678 aa13.36□□□□□ -0.27
MSH5-209ENST00000450148 ZNF512Q96ME7 567 aaPredicted RBP13.36□□□□□ -0.27
MSH5-209ENST00000450148 ZSWIM3Q96MP5 696 aa13.36□□□□□ -0.27
MSH5-209ENST00000450148 C7orf25Q9BPX7 421 aa13.36□□□□□ -0.27
MSH5-209ENST00000450148 DDX23Q9BUQ8 820 aaKnown RBP13.36□□□□□ -0.27
MSH5-209ENST00000450148 ZCWPW1Q9H0M4 648 aa13.36□□□□□ -0.27
MSH5-209ENST00000450148 IRF2BPLQ9H1B7 796 aa13.36□□□□□ -0.27
MSH5-209ENST00000450148 PCIF1Q9H4Z3 704 aa13.36□□□□□ -0.27
MSH5-209ENST00000450148 TMEM206Q9H813 350 aa13.36□□□□□ -0.27
MSH5-209ENST00000450148 TICRRQ7Z2Z1 1910 aa13.36□□□□□ -0.27
MSH5-209ENST00000450148 NCANO14594 1321 aa13.36□□□□□ -0.27
MSH5-209ENST00000450148 PROB1E7EW31 1015 aa13.35□□□□□ -0.27
MSH5-209ENST00000450148 CYB561D2O14569 222 aa13.35□□□□□ -0.27
MSH5-209ENST00000450148 ZNF197O14709 1029 aa13.35□□□□□ -0.27
MSH5-209ENST00000450148 EXTL3O43909 919 aa13.35□□□□□ -0.27
MSH5-209ENST00000450148 GLULP15104 373 aa13.35□□□□□ -0.27
MSH5-209ENST00000450148 GJA1P17302 382 aa13.35□□□□□ -0.27
MSH5-209ENST00000450148 CASP1P29466 404 aa13.35□□□□□ -0.27
MSH5-209ENST00000450148 FAM78AQ5JUQ0 283 aa13.35□□□□□ -0.27
MSH5-209ENST00000450148 WSCD1Q658N2 575 aa13.35□□□□□ -0.27
MSH5-209ENST00000450148 PDZD4Q76G19 769 aaPredicted RBP13.35□□□□□ -0.27
MSH5-209ENST00000450148 LRRTM3Q86VH5 581 aa13.35□□□□□ -0.27
MSH5-209ENST00000450148 SYCP3Q8IZU3 236 aa13.35□□□□□ -0.27
MSH5-209ENST00000450148 DTWD2Q8NBA8 298 aa13.35□□□□□ -0.27
MSH5-209ENST00000450148 SHKBP1Q8TBC3 707 aa13.35□□□□□ -0.27
MSH5-209ENST00000450148 ZNF507Q8TCN5 953 aa13.35□□□□□ -0.27
MSH5-209ENST00000450148 ATOH1Q92858 354 aaPredicted RBP13.35□□□□□ -0.27
MSH5-209ENST00000450148 ELSPBP1Q96BH3 223 aa13.35□□□□□ -0.27
MSH5-209ENST00000450148 ASB16Q96NS5 453 aa13.35□□□□□ -0.27
MSH5-209ENST00000450148 PYM1Q9BRP8 204 aaKnown RBP13.35□□□□□ -0.27
MSH5-209ENST00000450148 HSFX1Q9UBD0 423 aa13.35□□□□□ -0.27
MSH5-209ENST00000450148 SIX4Q9UIU6 781 aa13.35□□□□□ -0.27
MSH5-209ENST00000450148 RCOR1Q9UKL0 485 aa13.35□□□□□ -0.27
MSH5-209ENST00000450148 SLC27A5Q9Y2P5 690 aa13.35□□□□□ -0.27
MSH5-209ENST00000450148 GTF3C3Q9Y5Q9 886 aa13.35□□□□□ -0.27
MSH5-209ENST00000450148 KIF26AQ9ULI4 1882 aaPredicted RBP13.34□□□□□ -0.27
MSH5-209ENST00000450148 KPNA7A9QM74 516 aa13.34□□□□□ -0.27
MSH5-209ENST00000450148 POLR2DO15514 142 aaKnown RBP13.34□□□□□ -0.27
MSH5-209ENST00000450148 TGFB1I1O43294 461 aa13.34□□□□□ -0.27
MSH5-209ENST00000450148 SOAT2O75908 522 aa13.34□□□□□ -0.27
MSH5-209ENST00000450148 MYL4P12829 197 aa13.34□□□□□ -0.27
MSH5-209ENST00000450148 NBL1P41271 181 aa13.34□□□□□ -0.27
MSH5-209ENST00000450148 TFAMQ00059 246 aaKnown RBP13.34□□□□□ -0.27
MSH5-209ENST00000450148 DNM1Q05193 864 aaKnown RBP13.34□□□□□ -0.27
MSH5-209ENST00000450148 SNW1Q13573 536 aaKnown RBP13.34□□□□□ -0.27
MSH5-209ENST00000450148 TEAD2Q15562 447 aa13.34□□□□□ -0.27
MSH5-209ENST00000450148 MLF2Q15773 248 aaPredicted RBP13.34□□□□□ -0.27
MSH5-209ENST00000450148 SLC44A4Q53GD3 710 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms