RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 A8MXQ7 604 aa16.91■□□□□ 0.3
CNOT3-204ENST00000447684 PENKP01210 267 aaPredicted RBP16.91■□□□□ 0.3
CNOT3-204ENST00000447684 MYL2P10916 166 aa16.91■□□□□ 0.3
CNOT3-204ENST00000447684 CDK16Q00536 496 aa16.91■□□□□ 0.3
CNOT3-204ENST00000447684 TMED1Q13445 227 aa16.91■□□□□ 0.3
CNOT3-204ENST00000447684 EPC2Q52LR7 807 aa16.91■□□□□ 0.3
CNOT3-204ENST00000447684 LLGL2Q6P1M3 1020 aa16.91■□□□□ 0.3
CNOT3-204ENST00000447684 CCDC174Q6PII3 467 aa16.91■□□□□ 0.3
CNOT3-204ENST00000447684 ZCCHC9Q8N567 271 aaKnown RBP16.91■□□□□ 0.3
CNOT3-204ENST00000447684 TAB3Q8N5C8 712 aaPredicted RBP16.91■□□□□ 0.3
CNOT3-204ENST00000447684 GLIS1Q8NBF1 620 aa16.91■□□□□ 0.3
CNOT3-204ENST00000447684 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.91■□□□□ 0.3
CNOT3-204ENST00000447684 PPP2R3CQ969Q6 453 aa16.91■□□□□ 0.3
CNOT3-204ENST00000447684 KLHL11Q9NVR0 708 aa16.91■□□□□ 0.3
CNOT3-204ENST00000447684 DDX43Q9NXZ2 648 aaKnown RBP16.91■□□□□ 0.3
CNOT3-204ENST00000447684 IRS2Q9Y4H2 1338 aa16.91■□□□□ 0.3
CNOT3-204ENST00000447684 TNRC6CQ9HCJ0 1690 aaKnown RBP16.91■□□□□ 0.3
CNOT3-204ENST00000447684 RARBP10826 455 aa16.9■□□□□ 0.3
CNOT3-204ENST00000447684 EEF2P13639 858 aaKnown RBP16.9■□□□□ 0.3
CNOT3-204ENST00000447684 ETS1P14921 441 aa16.9■□□□□ 0.3
CNOT3-204ENST00000447684 MAGEA8P43361 318 aa16.9■□□□□ 0.3
CNOT3-204ENST00000447684 KCNQ4P56696 695 aa16.9■□□□□ 0.3
CNOT3-204ENST00000447684 RASA2Q15283 850 aa16.9■□□□□ 0.3
CNOT3-204ENST00000447684 DPP8Q6V1X1 898 aaPredicted RBP16.9■□□□□ 0.3
CNOT3-204ENST00000447684 SCUBE1Q8IWY4 988 aa16.9■□□□□ 0.3
CNOT3-204ENST00000447684 LENG1Q96BZ8 264 aaPredicted RBP16.9■□□□□ 0.3
CNOT3-204ENST00000447684 PARVGQ9HBI0 331 aa16.9■□□□□ 0.3
CNOT3-204ENST00000447684 DDX18Q9NVP1 670 aaKnown RBP16.9■□□□□ 0.3
CNOT3-204ENST00000447684 PSMC3IPQ9P2W1 217 aaPredicted RBP16.9■□□□□ 0.3
CNOT3-204ENST00000447684 GTF3C4Q9UKN8 822 aa16.9■□□□□ 0.3
CNOT3-204ENST00000447684 USTQ9Y2C2 406 aa16.9■□□□□ 0.3
CNOT3-204ENST00000447684 TISP43B9A030 160 aa16.9■□□□□ 0.3
CNOT3-204ENST00000447684 PIK3CDO00329 1044 aa16.9■□□□□ 0.3
CNOT3-204ENST00000447684 ASLP04424 464 aa16.9■□□□□ 0.3
CNOT3-204ENST00000447684 ITGA2BP08514 1039 aa16.9■□□□□ 0.3
CNOT3-204ENST00000447684 YY1P25490 414 aa16.9■□□□□ 0.3
CNOT3-204ENST00000447684 ARL4CP56559 192 aa16.9■□□□□ 0.3
CNOT3-204ENST00000447684 ITPK1Q13572 414 aa16.9■□□□□ 0.3
CNOT3-204ENST00000447684 MTMR2Q13614 643 aa16.9■□□□□ 0.3
CNOT3-204ENST00000447684 RASA3Q14644 834 aa16.9■□□□□ 0.3
CNOT3-204ENST00000447684 ODR4Q5SWX8 454 aa16.9■□□□□ 0.3
CNOT3-204ENST00000447684 CLEC4GQ6UXB4 293 aa16.9■□□□□ 0.3
CNOT3-204ENST00000447684 SLC51AQ86UW1 340 aa16.9■□□□□ 0.3
CNOT3-204ENST00000447684 ZNF398Q8TD17 642 aa16.9■□□□□ 0.3
CNOT3-204ENST00000447684 GPR101Q96P66 508 aaPredicted RBP16.9■□□□□ 0.3
CNOT3-204ENST00000447684 PANX3Q96QZ0 392 aa16.9■□□□□ 0.3
CNOT3-204ENST00000447684 FHDC1Q9C0D6 1143 aaPredicted RBP16.9■□□□□ 0.3
CNOT3-204ENST00000447684 MTMR4Q9NYA4 1195 aa16.9■□□□□ 0.3
CNOT3-204ENST00000447684 PCDHA1Q9Y5I3 950 aa16.9■□□□□ 0.3
CNOT3-204ENST00000447684 FAM237BA0A1B0GVD1 139 aa16.89■□□□□ 0.3
CNOT3-204ENST00000447684 CYP1A2P05177 515 aa16.89■□□□□ 0.3
CNOT3-204ENST00000447684 ABHD2P08910 425 aa16.89■□□□□ 0.3
CNOT3-204ENST00000447684 SNHG28P0DPA3 235 aa16.89■□□□□ 0.3
CNOT3-204ENST00000447684 CD58P19256 250 aa16.89■□□□□ 0.3
CNOT3-204ENST00000447684 ARHGAP4P98171 946 aa16.89■□□□□ 0.3
CNOT3-204ENST00000447684 FMO1Q01740 532 aa16.89■□□□□ 0.3
CNOT3-204ENST00000447684 PPP3CAQ08209 521 aa16.89■□□□□ 0.3
CNOT3-204ENST00000447684 SPIRE1Q08AE8 756 aa16.89■□□□□ 0.3
CNOT3-204ENST00000447684 PICALMQ13492 652 aa16.89■□□□□ 0.3
CNOT3-204ENST00000447684 MED21Q13503 144 aa16.89■□□□□ 0.3
CNOT3-204ENST00000447684 LMO3Q8TAP4 145 aa16.89■□□□□ 0.3
CNOT3-204ENST00000447684 RTFDC1Q9BY42 306 aaPredicted RBP16.89■□□□□ 0.3
CNOT3-204ENST00000447684 UVRAGQ9P2Y5 699 aa16.89■□□□□ 0.3
CNOT3-204ENST00000447684 PPARGC1AQ9UBK2 798 aaKnown RBP16.89■□□□□ 0.3
CNOT3-204ENST00000447684 ZNF148Q9UQR1 794 aa16.89■□□□□ 0.3
CNOT3-204ENST00000447684 ATF5Q9Y2D1 282 aaPredicted RBP16.89■□□□□ 0.3
CNOT3-204ENST00000447684 MTA2O94776 668 aa16.89■□□□□ 0.29
CNOT3-204ENST00000447684 FAM163BP0C2L3 166 aa16.89■□□□□ 0.29
CNOT3-204ENST00000447684 GRIA2P42262 883 aa16.89■□□□□ 0.29
CNOT3-204ENST00000447684 TMEM62Q0P6H9 643 aa16.89■□□□□ 0.29
CNOT3-204ENST00000447684 GPS1Q13098 491 aa16.89■□□□□ 0.29
CNOT3-204ENST00000447684 R3HDM1Q15032 1099 aaKnown RBP16.89■□□□□ 0.29
CNOT3-204ENST00000447684 TCEAL1Q15170 157 aa16.89■□□□□ 0.29
CNOT3-204ENST00000447684 SH2D4BQ5SQS7 431 aa16.89■□□□□ 0.29
CNOT3-204ENST00000447684 RBM15BQ8NDT2 890 aaKnown RBP16.89■□□□□ 0.29
CNOT3-204ENST00000447684 PYDC1Q8WXC3 89 aa16.89■□□□□ 0.29
CNOT3-204ENST00000447684 SKA1Q96BD8 255 aa16.89■□□□□ 0.29
CNOT3-204ENST00000447684 OXNAD1Q96HP4 312 aaPredicted RBP16.89■□□□□ 0.29
CNOT3-204ENST00000447684 AGBL1Q96MI9 1066 aa16.89■□□□□ 0.29
CNOT3-204ENST00000447684 TMEM117Q9H0C3 514 aa16.89■□□□□ 0.29
CNOT3-204ENST00000447684 MTO1Q9Y2Z2 717 aaKnown RBP16.89■□□□□ 0.29
CNOT3-204ENST00000447684 ZBTB5O15062 677 aa16.89■□□□□ 0.29
CNOT3-204ENST00000447684 IFNB1P01574 187 aa16.89■□□□□ 0.29
CNOT3-204ENST00000447684 LDHCP07864 332 aa16.89■□□□□ 0.29
CNOT3-204ENST00000447684 GZMAP12544 262 aa16.89■□□□□ 0.29
CNOT3-204ENST00000447684 AKR1B1P15121 316 aa16.89■□□□□ 0.29
CNOT3-204ENST00000447684 GAP43P17677 238 aa16.89■□□□□ 0.29
CNOT3-204ENST00000447684 MAGEA10P43363 369 aaPredicted RBP16.89■□□□□ 0.29
CNOT3-204ENST00000447684 SNAP25P60880 206 aa16.89■□□□□ 0.29
CNOT3-204ENST00000447684 SMC1BQ8NDV3 1235 aa16.89■□□□□ 0.29
CNOT3-204ENST00000447684 STKLD1Q8NE28 680 aa16.89■□□□□ 0.29
CNOT3-204ENST00000447684 HIPK4Q8NE63 616 aa16.89■□□□□ 0.29
CNOT3-204ENST00000447684 MTBPQ96DY7 904 aa16.89■□□□□ 0.29
CNOT3-204ENST00000447684 RBM17Q96I25 401 aaKnown RBP16.89■□□□□ 0.29
CNOT3-204ENST00000447684 EIF2AK1Q9BQI3 630 aaKnown RBP16.89■□□□□ 0.29
CNOT3-204ENST00000447684 OLFML3Q9NRN5 406 aa16.89■□□□□ 0.29
CNOT3-204ENST00000447684 IL1RAPL1Q9NZN1 696 aa16.89■□□□□ 0.29
CNOT3-204ENST00000447684 BLOC1S6Q9UL45 172 aa16.89■□□□□ 0.29
CNOT3-204ENST00000447684 LOC102724428A0A0B4J2F2 783 aa16.88■□□□□ 0.29
CNOT3-204ENST00000447684 ARHGAP42A6NI28 874 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms