RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 CEP135Q66GS9 1140 aa17.64■□□□□ 0.41
SF3A1-204ENST00000447376 SLC9A9Q8IVB4 645 aa17.64■□□□□ 0.41
SF3A1-204ENST00000447376 ELMOD1Q8N336 334 aa17.64■□□□□ 0.41
SF3A1-204ENST00000447376 PLCD3Q8N3E9 789 aa17.64■□□□□ 0.41
SF3A1-204ENST00000447376 C1orf127Q8N9H9 656 aa17.64■□□□□ 0.41
SF3A1-204ENST00000447376 TDRD5Q8NAT2 981 aaKnown RBP17.64■□□□□ 0.41
SF3A1-204ENST00000447376 SLC7A14Q8TBB6 771 aa17.64■□□□□ 0.41
SF3A1-204ENST00000447376 TSG101Q99816 390 aa17.64■□□□□ 0.41
SF3A1-204ENST00000447376 RHOBTB2Q9BYZ6 727 aa17.64■□□□□ 0.41
SF3A1-204ENST00000447376 PRKD2Q9BZL6 878 aa17.64■□□□□ 0.41
SF3A1-204ENST00000447376 NUP62CLQ9H1M0 184 aa17.64■□□□□ 0.41
SF3A1-204ENST00000447376 KCTD10Q9H3F6 313 aa17.64■□□□□ 0.41
SF3A1-204ENST00000447376 CLSTN2Q9H4D0 955 aa17.64■□□□□ 0.41
SF3A1-204ENST00000447376 POMKQ9H5K3 350 aa17.64■□□□□ 0.41
SF3A1-204ENST00000447376 POLIQ9UNA4 740 aa17.64■□□□□ 0.41
SF3A1-204ENST00000447376 MAPK8IP1Q9UQF2 711 aa17.64■□□□□ 0.41
SF3A1-204ENST00000447376 TRAF3IP3Q9Y228 551 aa17.64■□□□□ 0.41
SF3A1-204ENST00000447376 C19orf67A6NJJ6 358 aa17.63■□□□□ 0.41
SF3A1-204ENST00000447376 ADAM12O43184 909 aa17.63■□□□□ 0.41
SF3A1-204ENST00000447376 PHACTR2O75167 634 aa17.63■□□□□ 0.41
SF3A1-204ENST00000447376 RFPL2O75678 378 aa17.63■□□□□ 0.41
SF3A1-204ENST00000447376 ALADP13716 330 aa17.63■□□□□ 0.41
SF3A1-204ENST00000447376 ATF2P15336 505 aa17.63■□□□□ 0.41
SF3A1-204ENST00000447376 PTMSP20962 102 aa17.63■□□□□ 0.41
SF3A1-204ENST00000447376 TRPC3Q13507 836 aa17.63■□□□□ 0.41
SF3A1-204ENST00000447376 LMBRD2Q68DH5 695 aaPredicted RBP17.63■□□□□ 0.41
SF3A1-204ENST00000447376 OTOP3Q7RTS5 596 aa17.63■□□□□ 0.41
SF3A1-204ENST00000447376 ERCC4Q92889 916 aaPredicted RBP17.63■□□□□ 0.41
SF3A1-204ENST00000447376 CYP4F11Q9HBI6 524 aa17.63■□□□□ 0.41
SF3A1-204ENST00000447376 KIAA1468Q9P260 1216 aa17.63■□□□□ 0.41
SF3A1-204ENST00000447376 WDR27A2RRH5 827 aa17.62■□□□□ 0.41
SF3A1-204ENST00000447376 LOC730098B7Z3J9 87 aa17.62■□□□□ 0.41
SF3A1-204ENST00000447376 SPTLC1O15269 473 aa17.62■□□□□ 0.41
SF3A1-204ENST00000447376 ABLIM3O94929 683 aa17.62■□□□□ 0.41
SF3A1-204ENST00000447376 CYP11A1P05108 521 aa17.62■□□□□ 0.41
SF3A1-204ENST00000447376 KRT13P13646 458 aa17.62■□□□□ 0.41
SF3A1-204ENST00000447376 SP100P23497 879 aaPredicted RBP17.62■□□□□ 0.41
SF3A1-204ENST00000447376 NR2F2P24468 414 aa17.62■□□□□ 0.41
SF3A1-204ENST00000447376 WNT7BP56706 349 aa17.62■□□□□ 0.41
SF3A1-204ENST00000447376 COBLL1Q53SF7 1204 aa17.62■□□□□ 0.41
SF3A1-204ENST00000447376 RSPO2Q6UXX9 243 aaPredicted RBP17.62■□□□□ 0.41
SF3A1-204ENST00000447376 TMEM86AQ8N2M4 240 aa17.62■□□□□ 0.41
SF3A1-204ENST00000447376 TMEM130Q8N3G9 435 aa17.62■□□□□ 0.41
SF3A1-204ENST00000447376 TRIML1Q8N9V2 468 aa17.62■□□□□ 0.41
SF3A1-204ENST00000447376 TMEM174Q8WUU8 243 aa17.62■□□□□ 0.41
SF3A1-204ENST00000447376 MFSD14AQ96MC6 490 aa17.62■□□□□ 0.41
SF3A1-204ENST00000447376 AFF4Q9UHB7 1163 aaKnown RBP17.62■□□□□ 0.41
SF3A1-204ENST00000447376 MAN1B1Q9UKM7 699 aa17.62■□□□□ 0.41
SF3A1-204ENST00000447376 USTQ9Y2C2 406 aa17.62■□□□□ 0.41
SF3A1-204ENST00000447376 MTCL1Q9Y4B5 1905 aaKnown RBP17.62■□□□□ 0.41
SF3A1-204ENST00000447376 TBC1D4O60343 1298 aa17.61■□□□□ 0.41
SF3A1-204ENST00000447376 TSPY1Q01534 308 aa17.61■□□□□ 0.41
SF3A1-204ENST00000447376 ADCY1Q08828 1119 aa17.61■□□□□ 0.41
SF3A1-204ENST00000447376 SMARCB1Q12824 385 aa17.61■□□□□ 0.41
SF3A1-204ENST00000447376 BIRC3Q13489 604 aa17.61■□□□□ 0.41
SF3A1-204ENST00000447376 NFIL3Q16649 462 aa17.61■□□□□ 0.41
SF3A1-204ENST00000447376 TRAPPC11Q7Z392 1133 aa17.61■□□□□ 0.41
SF3A1-204ENST00000447376 TCEAL8Q8IYN2 117 aa17.61■□□□□ 0.41
SF3A1-204ENST00000447376 DCP1BQ8IZD4 617 aaKnown RBP17.61■□□□□ 0.41
SF3A1-204ENST00000447376 OR5B17Q8NGF7 314 aa17.61■□□□□ 0.41
SF3A1-204ENST00000447376 HPDLQ96IR7 371 aa17.61■□□□□ 0.41
SF3A1-204ENST00000447376 WDR6Q9NNW5 1121 aaKnown RBP17.61■□□□□ 0.41
SF3A1-204ENST00000447376 DMAC2Q9NW81 257 aa17.61■□□□□ 0.41
SF3A1-204ENST00000447376 SNX9Q9Y5X1 595 aa17.61■□□□□ 0.41
SF3A1-204ENST00000447376 CLUHO75153 1309 aa17.61■□□□□ 0.41
SF3A1-204ENST00000447376 VCANP13611 3396 aa17.61■□□□□ 0.41
SF3A1-204ENST00000447376 PSMA7O14818 248 aa17.6■□□□□ 0.41
SF3A1-204ENST00000447376 MAPK13O15264 365 aa17.6■□□□□ 0.41
SF3A1-204ENST00000447376 CCL16O15467 120 aa17.6■□□□□ 0.41
SF3A1-204ENST00000447376 POU2F2P09086 479 aa17.6■□□□□ 0.41
SF3A1-204ENST00000447376 GBP2P32456 591 aaPredicted RBP17.6■□□□□ 0.41
SF3A1-204ENST00000447376 PRCPP42785 496 aa17.6■□□□□ 0.41
SF3A1-204ENST00000447376 MYL7Q01449 175 aa17.6■□□□□ 0.41
SF3A1-204ENST00000447376 PLD1Q13393 1074 aa17.6■□□□□ 0.41
SF3A1-204ENST00000447376 ADAM9Q13443 819 aa17.6■□□□□ 0.41
SF3A1-204ENST00000447376 EDRF1Q3B7T1 1238 aa17.6■□□□□ 0.41
SF3A1-204ENST00000447376 INTS8Q75QN2 995 aaKnown RBP17.6■□□□□ 0.41
SF3A1-204ENST00000447376 SMYD4Q8IYR2 804 aaPredicted RBP17.6■□□□□ 0.41
SF3A1-204ENST00000447376 TOP6BLQ8N6T0 577 aa17.6■□□□□ 0.41
SF3A1-204ENST00000447376 SPATA18Q8TC71 538 aa17.6■□□□□ 0.41
SF3A1-204ENST00000447376 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.6■□□□□ 0.41
SF3A1-204ENST00000447376 CDH22Q9UJ99 828 aa17.6■□□□□ 0.41
SF3A1-204ENST00000447376 BIN1O00499 593 aa17.59■□□□□ 0.41
SF3A1-204ENST00000447376 CETN3O15182 167 aa17.59■□□□□ 0.41
SF3A1-204ENST00000447376 DCXO43602 365 aa17.59■□□□□ 0.41
SF3A1-204ENST00000447376 PSMC2P35998 433 aaKnown RBP17.59■□□□□ 0.41
SF3A1-204ENST00000447376 LHX1P48742 406 aa17.59■□□□□ 0.41
SF3A1-204ENST00000447376 TNNC1P63316 161 aa17.59■□□□□ 0.41
SF3A1-204ENST00000447376 GPR17Q13304 367 aa17.59■□□□□ 0.41
SF3A1-204ENST00000447376 MORC3Q14149 939 aa17.59■□□□□ 0.41
SF3A1-204ENST00000447376 WSCD1Q658N2 575 aa17.59■□□□□ 0.41
SF3A1-204ENST00000447376 ISM2Q6H9L7 571 aa17.59■□□□□ 0.41
SF3A1-204ENST00000447376 IQCEQ6IPM2 695 aa17.59■□□□□ 0.41
SF3A1-204ENST00000447376 DPH6Q7L8W6 267 aa17.59■□□□□ 0.41
SF3A1-204ENST00000447376 RNF135Q8IUD6 432 aa17.59■□□□□ 0.41
SF3A1-204ENST00000447376 FAM186BQ8IYM0 893 aa17.59■□□□□ 0.41
SF3A1-204ENST00000447376 GPT2Q8TD30 523 aa17.59■□□□□ 0.41
SF3A1-204ENST00000447376 TMC2Q8TDI7 906 aa17.59■□□□□ 0.41
SF3A1-204ENST00000447376 PARD3BQ8TEW8 1205 aa17.59■□□□□ 0.41
SF3A1-204ENST00000447376 SYAP1Q96A49 352 aaPredicted RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms