RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 Q6ZSN1 163 aa5.33□□□□□ -1.56
HMGB1P16-201ENST00000447155 HTR3DQ70Z44 454 aa5.33□□□□□ -1.56
HMGB1P16-201ENST00000447155 SESTD1Q86VW0 696 aa5.33□□□□□ -1.56
HMGB1P16-201ENST00000447155 ZNF808Q8N4W9 903 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P16-201ENST00000447155 OR2C3Q8N628 320 aa5.33□□□□□ -1.56
HMGB1P16-201ENST00000447155 PCSK9Q8NBP7 692 aaKnown RBP5.33□□□□□ -1.56
HMGB1P16-201ENST00000447155 TMIEQ8NEW7 156 aa5.33□□□□□ -1.56
HMGB1P16-201ENST00000447155 DEPTORQ8TB45 409 aa5.33□□□□□ -1.56
HMGB1P16-201ENST00000447155 NUP133Q8WUM0 1156 aa5.33□□□□□ -1.56
HMGB1P16-201ENST00000447155 PHACTR3Q96KR7 559 aa5.33□□□□□ -1.56
HMGB1P16-201ENST00000447155 SGCZQ96LD1 299 aa5.33□□□□□ -1.56
HMGB1P16-201ENST00000447155 RIPOR3Q96MK2 946 aa5.33□□□□□ -1.56
HMGB1P16-201ENST00000447155 KLHL32Q96NJ5 620 aa5.33□□□□□ -1.56
HMGB1P16-201ENST00000447155 RBM15Q96T37 977 aaKnown RBP eCLIP5.33□□□□□ -1.56
HMGB1P16-201ENST00000447155 REXO4Q9GZR2 422 aaKnown RBP5.33□□□□□ -1.56
HMGB1P16-201ENST00000447155 STARD7Q9NQZ5 370 aa5.33□□□□□ -1.56
HMGB1P16-201ENST00000447155 SACM1LQ9NTJ5 587 aa5.33□□□□□ -1.56
HMGB1P16-201ENST00000447155 PADI4Q9UM07 663 aa5.33□□□□□ -1.56
HMGB1P16-201ENST00000447155 DMTF1Q9Y222 760 aa5.33□□□□□ -1.56
HMGB1P16-201ENST00000447155 DAAM1Q9Y4D1 1078 aa5.33□□□□□ -1.56
HMGB1P16-201ENST00000447155 RIPOR2Q9Y4F9 1068 aa5.33□□□□□ -1.56
HMGB1P16-201ENST00000447155 PLEKHM1Q9Y4G2 1056 aa5.33□□□□□ -1.56
HMGB1P16-201ENST00000447155 GCC2Q8IWJ2 1684 aa5.33□□□□□ -1.56
HMGB1P16-201ENST00000447155 ARAP1Q96P48 1450 aa5.32□□□□□ -1.56
HMGB1P16-201ENST00000447155 TONSLQ96HA7 1378 aa5.32□□□□□ -1.56
HMGB1P16-201ENST00000447155 TRIM43BA6NCK2 446 aa5.32□□□□□ -1.56
HMGB1P16-201ENST00000447155 GOLGA6L6A8MZA4 724 aa5.32□□□□□ -1.56
HMGB1P16-201ENST00000447155 DNAJB5O75953 348 aa5.32□□□□□ -1.56
HMGB1P16-201ENST00000447155 SETSIPP0DME0 302 aa5.32□□□□□ -1.56
HMGB1P16-201ENST00000447155 CKBP12277 381 aa5.32□□□□□ -1.56
HMGB1P16-201ENST00000447155 STT3AP46977 705 aa5.32□□□□□ -1.56
HMGB1P16-201ENST00000447155 MAN2A2P49641 1150 aa5.32□□□□□ -1.56
HMGB1P16-201ENST00000447155 POU6F2P78424 691 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P16-201ENST00000447155 BTKQ06187 659 aa5.32□□□□□ -1.56
HMGB1P16-201ENST00000447155 SLC13A2Q13183 592 aa5.32□□□□□ -1.56
HMGB1P16-201ENST00000447155 RAB32Q13637 225 aa5.32□□□□□ -1.56
HMGB1P16-201ENST00000447155 HS1BP3Q53T59 392 aa5.32□□□□□ -1.56
HMGB1P16-201ENST00000447155 L1TD1Q5T7N2 865 aaKnown RBP5.32□□□□□ -1.56
HMGB1P16-201ENST00000447155 GORABQ5T7V8 394 aa5.32□□□□□ -1.56
HMGB1P16-201ENST00000447155 USP37Q86T82 979 aa5.32□□□□□ -1.56
HMGB1P16-201ENST00000447155 SYT12Q8IV01 421 aa5.32□□□□□ -1.56
HMGB1P16-201ENST00000447155 ZFPM1Q8IX07 1006 aa5.32□□□□□ -1.56
HMGB1P16-201ENST00000447155 SLC17A8Q8NDX2 589 aa5.32□□□□□ -1.56
HMGB1P16-201ENST00000447155 Q8TCH9 128 aa5.32□□□□□ -1.56
HMGB1P16-201ENST00000447155 TRIM43Q96BQ3 446 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P16-201ENST00000447155 MNTQ99583 582 aa5.32□□□□□ -1.56
HMGB1P16-201ENST00000447155 COLEC11Q9BWP8 271 aa5.32□□□□□ -1.56
HMGB1P16-201ENST00000447155 IMPG2Q9BZV3 1241 aa5.32□□□□□ -1.56
HMGB1P16-201ENST00000447155 ZNF518BQ9C0D4 1074 aa5.32□□□□□ -1.56
HMGB1P16-201ENST00000447155 TINAGL1Q9GZM7 467 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P16-201ENST00000447155 MYH16Q9H6N6 1097 aa5.32□□□□□ -1.56
HMGB1P16-201ENST00000447155 SMURF2Q9HAU4 748 aa5.32□□□□□ -1.56
HMGB1P16-201ENST00000447155 COL20A1Q9P218 1284 aa5.32□□□□□ -1.56
HMGB1P16-201ENST00000447155 SETD5Q9C0A6 1442 aa5.31□□□□□ -1.56
HMGB1P16-201ENST00000447155 RAB3GAP2Q9H2M9 1393 aa5.31□□□□□ -1.56
HMGB1P16-201ENST00000447155 KIF21AQ7Z4S6 1674 aa5.31□□□□□ -1.56
HMGB1P16-201ENST00000447155 TOP2BQ02880 1626 aa5.31□□□□□ -1.56
HMGB1P16-201ENST00000447155 KLRG2A4D1S0 409 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P16-201ENST00000447155 POM121BA6NF01 834 aa5.31□□□□□ -1.56
HMGB1P16-201ENST00000447155 M0QYG6 137 aa5.31□□□□□ -1.56
HMGB1P16-201ENST00000447155 PRSS23O95084 383 aa5.31□□□□□ -1.56
HMGB1P16-201ENST00000447155 UNC5CO95185 931 aa5.31□□□□□ -1.56
HMGB1P16-201ENST00000447155 GRPP07492 148 aa5.31□□□□□ -1.56
HMGB1P16-201ENST00000447155 TSHRP16473 764 aa5.31□□□□□ -1.56
HMGB1P16-201ENST00000447155 ACO1P21399 889 aaKnown RBP5.31□□□□□ -1.56
HMGB1P16-201ENST00000447155 TNFSF4P23510 183 aa5.31□□□□□ -1.56
HMGB1P16-201ENST00000447155 SLFN5Q08AF3 891 aa5.31□□□□□ -1.56
HMGB1P16-201ENST00000447155 TCF15Q12870 199 aa5.31□□□□□ -1.56
HMGB1P16-201ENST00000447155 CRB2Q5IJ48 1285 aa5.31□□□□□ -1.56
HMGB1P16-201ENST00000447155 NOMO2Q5JPE7 1267 aa5.31□□□□□ -1.56
HMGB1P16-201ENST00000447155 C3orf38Q5JPI3 329 aa5.31□□□□□ -1.56
HMGB1P16-201ENST00000447155 AGAP9Q5VTM2 703 aa5.31□□□□□ -1.56
HMGB1P16-201ENST00000447155 METRNLQ641Q3 311 aa5.31□□□□□ -1.56
HMGB1P16-201ENST00000447155 LMBRD2Q68DH5 695 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P16-201ENST00000447155 XRRA1Q6P2D8 792 aa5.31□□□□□ -1.56
HMGB1P16-201ENST00000447155 RHOT2Q8IXI1 618 aa5.31□□□□□ -1.56
HMGB1P16-201ENST00000447155 SMC5Q8IY18 1101 aa5.31□□□□□ -1.56
HMGB1P16-201ENST00000447155 PDPRQ8NCN5 879 aa5.31□□□□□ -1.56
HMGB1P16-201ENST00000447155 MAML1Q92585 1016 aa5.31□□□□□ -1.56
HMGB1P16-201ENST00000447155 ARPC5LQ9BPX5 153 aa5.31□□□□□ -1.56
HMGB1P16-201ENST00000447155 CNPPD1Q9BV87 410 aa5.31□□□□□ -1.56
HMGB1P16-201ENST00000447155 SELENOOQ9BVL4 669 aa5.31□□□□□ -1.56
HMGB1P16-201ENST00000447155 GPR87Q9BY21 358 aa5.31□□□□□ -1.56
HMGB1P16-201ENST00000447155 PLCB1Q9NQ66 1216 aa5.31□□□□□ -1.56
HMGB1P16-201ENST00000447155 FNIP2Q9P278 1114 aa5.31□□□□□ -1.56
HMGB1P16-201ENST00000447155 TMX2Q9Y320 296 aa5.31□□□□□ -1.56
HMGB1P16-201ENST00000447155 SMG6Q86US8 1419 aaKnown RBP5.31□□□□□ -1.56
HMGB1P16-201ENST00000447155 A0A087WWL8 130 aa5.3□□□□□ -1.56
HMGB1P16-201ENST00000447155 ABHD14A-ACY1A0A1B0GW23 586 aa5.3□□□□□ -1.56
HMGB1P16-201ENST00000447155 MBD3L4A6NDZ8 208 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P16-201ENST00000447155 MBD3L3A6NE82 208 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P16-201ENST00000447155 DIRC3C9JPN6 131 aa5.3□□□□□ -1.56
HMGB1P16-201ENST00000447155 E9PLN8 166 aa5.3□□□□□ -1.56
HMGB1P16-201ENST00000447155 F8W8V4 182 aa5.3□□□□□ -1.56
HMGB1P16-201ENST00000447155 MYO1CO00159 1063 aa5.3□□□□□ -1.56
HMGB1P16-201ENST00000447155 HSP90AA1P07900 732 aaKnown RBP5.3□□□□□ -1.56
HMGB1P16-201ENST00000447155 PARP1P09874 1014 aaKnown RBP5.3□□□□□ -1.56
HMGB1P16-201ENST00000447155 PIM1P11309 404 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P16-201ENST00000447155 SLC11A2P49281 568 aa5.3□□□□□ -1.56
HMGB1P16-201ENST00000447155 RPS16P62249 146 aaKnown RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms