RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 NOTCH4Q99466 2003 aa15.17■□□□□ 0.02
TREX1-202ENST00000444177 UBE4BO95155 1302 aa15.17■□□□□ 0.02
TREX1-202ENST00000444177 USP34Q70CQ2 3546 aa15.16■□□□□ 0.02
TREX1-202ENST00000444177 WDR87Q6ZQQ6 2873 aa15.16■□□□□ 0.02
TREX1-202ENST00000444177 GOLGA8IPA6NC78 632 aa15.16■□□□□ 0.02
TREX1-202ENST00000444177 GOLGA8JA6NMD2 632 aa15.16■□□□□ 0.02
TREX1-202ENST00000444177 M0QZQ0 153 aa15.16■□□□□ 0.02
TREX1-202ENST00000444177 LDHAP00338 332 aaKnown RBP15.16■□□□□ 0.02
TREX1-202ENST00000444177 LRG1P02750 347 aa15.16■□□□□ 0.02
TREX1-202ENST00000444177 ADRB2P07550 413 aa15.16■□□□□ 0.02
TREX1-202ENST00000444177 RHOP08100 348 aa15.16■□□□□ 0.02
TREX1-202ENST00000444177 PTPN2P17706 415 aa15.16■□□□□ 0.02
TREX1-202ENST00000444177 NDUFA8P51970 172 aa15.16■□□□□ 0.02
TREX1-202ENST00000444177 SPATA1Q5VX52 437 aa15.16■□□□□ 0.02
TREX1-202ENST00000444177 CRELD2Q6UXH1 353 aaPredicted RBP15.16■□□□□ 0.02
TREX1-202ENST00000444177 MTSS1LQ765P7 747 aa15.16■□□□□ 0.02
TREX1-202ENST00000444177 NPAS3Q8IXF0 933 aa15.16■□□□□ 0.02
TREX1-202ENST00000444177 NELFCDQ8IXH7 590 aa15.16■□□□□ 0.02
TREX1-202ENST00000444177 CCDC105Q8IYK2 499 aa15.16■□□□□ 0.02
TREX1-202ENST00000444177 DTWD2Q8NBA8 298 aa15.16■□□□□ 0.02
TREX1-202ENST00000444177 ZSWIM2Q8NEG5 633 aa15.16■□□□□ 0.02
TREX1-202ENST00000444177 ING5Q8WYH8 240 aa15.16■□□□□ 0.02
TREX1-202ENST00000444177 PAGE5Q96GU1 130 aa15.16■□□□□ 0.02
TREX1-202ENST00000444177 ASB7Q9H672 318 aa15.16■□□□□ 0.02
TREX1-202ENST00000444177 TBC1D17Q9HA65 648 aa15.16■□□□□ 0.02
TREX1-202ENST00000444177 CYP4F11Q9HBI6 524 aa15.16■□□□□ 0.02
TREX1-202ENST00000444177 AVENQ9NQS1 362 aaPredicted RBP15.16■□□□□ 0.02
TREX1-202ENST00000444177 RBAKQ9NYW8 714 aaPredicted RBP15.16■□□□□ 0.02
TREX1-202ENST00000444177 USP25Q9UHP3 1055 aa15.16■□□□□ 0.02
TREX1-202ENST00000444177 TCHHQ07283 1943 aa15.15■□□□□ 0.02
TREX1-202ENST00000444177 PVALEFA0A1B0GWK0 134 aa15.15■□□□□ 0.02
TREX1-202ENST00000444177 PROB1E7EW31 1015 aa15.15■□□□□ 0.02
TREX1-202ENST00000444177 PPEF2O14830 753 aa15.15■□□□□ 0.02
TREX1-202ENST00000444177 OAZ2O95190 189 aa15.15■□□□□ 0.02
TREX1-202ENST00000444177 IL18RAPO95256 599 aa15.15■□□□□ 0.02
TREX1-202ENST00000444177 RFX1P22670 979 aa15.15■□□□□ 0.02
TREX1-202ENST00000444177 SLC5A9Q2M3M2 681 aa15.15■□□□□ 0.02
TREX1-202ENST00000444177 ZNF280DQ6N043 979 aa15.15■□□□□ 0.02
TREX1-202ENST00000444177 PHLDB3Q6NSJ2 640 aa15.15■□□□□ 0.02
TREX1-202ENST00000444177 DSTYKQ6XUX3 929 aa15.15■□□□□ 0.02
TREX1-202ENST00000444177 EPM2AIP1Q7L775 607 aaPredicted RBP15.15■□□□□ 0.02
TREX1-202ENST00000444177 BRSK2Q8IWQ3 736 aa15.15■□□□□ 0.02
TREX1-202ENST00000444177 EFCAB13Q8IY85 973 aa15.15■□□□□ 0.02
TREX1-202ENST00000444177 MCRS1Q96EZ8 462 aa15.15■□□□□ 0.02
TREX1-202ENST00000444177 GOLPH3LQ9H4A5 285 aa15.15■□□□□ 0.02
TREX1-202ENST00000444177 SLC39A2Q9NP94 309 aa15.15■□□□□ 0.02
TREX1-202ENST00000444177 ARHGEF3Q9NR81 526 aa15.15■□□□□ 0.02
TREX1-202ENST00000444177 EXOC1Q9NV70 894 aa15.15■□□□□ 0.02
TREX1-202ENST00000444177 AFF4Q9UHB7 1163 aaKnown RBP15.15■□□□□ 0.02
TREX1-202ENST00000444177 MAFFQ9ULX9 164 aa15.15■□□□□ 0.02
TREX1-202ENST00000444177 C2CD2Q9Y426 696 aa15.15■□□□□ 0.02
TREX1-202ENST00000444177 TIMM13Q9Y5L4 95 aaPredicted RBP15.15■□□□□ 0.02
TREX1-202ENST00000444177 INSL5Q9Y5Q6 135 aa15.15■□□□□ 0.02
TREX1-202ENST00000444177 EP300Q09472 2414 aaPredicted RBP15.14■□□□□ 0.01
TREX1-202ENST00000444177 A0A1W2PQ27 194 aa15.14■□□□□ 0.01
TREX1-202ENST00000444177 A0A1W2PQ64 194 aa15.14■□□□□ 0.01
TREX1-202ENST00000444177 A0A1W2PQD8 194 aa15.14■□□□□ 0.01
TREX1-202ENST00000444177 EXTL3O43909 919 aa15.14■□□□□ 0.01
TREX1-202ENST00000444177 GFRA3O60609 400 aa15.14■□□□□ 0.01
TREX1-202ENST00000444177 NBL1P41271 181 aa15.14■□□□□ 0.01
TREX1-202ENST00000444177 AARSP49588 968 aaKnown RBP eCLIP15.14■□□□□ 0.01
TREX1-202ENST00000444177 POU5F1Q01860 360 aaKnown RBP15.14■□□□□ 0.01
TREX1-202ENST00000444177 EHHADHQ08426 723 aa15.14■□□□□ 0.01
TREX1-202ENST00000444177 ADCY1Q08828 1119 aa15.14■□□□□ 0.01
TREX1-202ENST00000444177 POTEHQ6S545 545 aa15.14■□□□□ 0.01
TREX1-202ENST00000444177 GPD1LQ8N335 351 aa15.14■□□□□ 0.01
TREX1-202ENST00000444177 ZNF507Q8TCN5 953 aa15.14■□□□□ 0.01
TREX1-202ENST00000444177 SCFD1Q8WVM8 642 aa15.14■□□□□ 0.01
TREX1-202ENST00000444177 CORO1BQ9BR76 489 aa15.14■□□□□ 0.01
TREX1-202ENST00000444177 GDE1Q9NZC3 331 aa15.14■□□□□ 0.01
TREX1-202ENST00000444177 SPTBN4Q9H254 2564 aa15.13■□□□□ 0.01
TREX1-202ENST00000444177 FAM237AA0A1B0GTK4 181 aa15.13■□□□□ 0.01
TREX1-202ENST00000444177 KIAA0391O15091 583 aaKnown RBP15.13■□□□□ 0.01
TREX1-202ENST00000444177 HOXD13P35453 343 aa15.13■□□□□ 0.01
TREX1-202ENST00000444177 WNT7BP56706 349 aa15.13■□□□□ 0.01
TREX1-202ENST00000444177 STARD6P59095 220 aa15.13■□□□□ 0.01
TREX1-202ENST00000444177 TFAMQ00059 246 aaKnown RBP15.13■□□□□ 0.01
TREX1-202ENST00000444177 YWHAHQ04917 246 aaPredicted RBP15.13■□□□□ 0.01
TREX1-202ENST00000444177 ANGPT1Q15389 498 aa15.13■□□□□ 0.01
TREX1-202ENST00000444177 KMT5BQ4FZB7 885 aa15.13■□□□□ 0.01
TREX1-202ENST00000444177 C9orf57Q5W0N0 161 aa15.13■□□□□ 0.01
TREX1-202ENST00000444177 RNF19BQ6ZMZ0 732 aa15.13■□□□□ 0.01
TREX1-202ENST00000444177 HS2ST1Q7LGA3 356 aa15.13■□□□□ 0.01
TREX1-202ENST00000444177 SHDQ96IW2 340 aa15.13■□□□□ 0.01
TREX1-202ENST00000444177 ZNF512Q96ME7 567 aaPredicted RBP15.13■□□□□ 0.01
TREX1-202ENST00000444177 KXD1Q9BQD3 176 aa15.13■□□□□ 0.01
TREX1-202ENST00000444177 AGPAT3Q9NRZ7 376 aa15.13■□□□□ 0.01
TREX1-202ENST00000444177 DPP3Q9NY33 737 aa15.13■□□□□ 0.01
TREX1-202ENST00000444177 HSPBP1Q9NZL4 362 aa15.13■□□□□ 0.01
TREX1-202ENST00000444177 SIT1Q9Y3P8 196 aa15.13■□□□□ 0.01
TREX1-202ENST00000444177 F5P12259 2224 aa15.13■□□□□ 0.01
TREX1-202ENST00000444177 GVINP1Q7Z2Y8 2422 aa15.13■□□□□ 0.01
TREX1-202ENST00000444177 TSC2P49815 1807 aa15.13■□□□□ 0.01
TREX1-202ENST00000444177 MYO15AQ9UKN7 3530 aa15.12■□□□□ 0.01
TREX1-202ENST00000444177 CACNA1IQ9P0X4 2223 aa15.12■□□□□ 0.01
TREX1-202ENST00000444177 GOLGA6L4A6NEF3 574 aa15.12■□□□□ 0.01
TREX1-202ENST00000444177 ZNF197O14709 1029 aa15.12■□□□□ 0.01
TREX1-202ENST00000444177 CLIC2O15247 247 aa15.12■□□□□ 0.01
TREX1-202ENST00000444177 KLRC4O43908 158 aa15.12■□□□□ 0.01
TREX1-202ENST00000444177 ECI2O75521 394 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms