RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 ZNF365Q70YC5 407 aa5.93□□□□□ -1.46
VPS50-206ENST00000443443 CCAR1Q8IX12 1150 aaKnown RBP5.93□□□□□ -1.46
VPS50-206ENST00000443443 CFAP52Q8N1V2 620 aa5.93□□□□□ -1.46
VPS50-206ENST00000443443 SLC30A5Q8TAD4 765 aa5.93□□□□□ -1.46
VPS50-206ENST00000443443 DMRTA2Q96SC8 542 aa5.93□□□□□ -1.46
VPS50-206ENST00000443443 UBA5Q9GZZ9 404 aa5.93□□□□□ -1.46
VPS50-206ENST00000443443 CHPF2Q9P2E5 772 aa5.93□□□□□ -1.46
VPS50-206ENST00000443443 NEU2Q9Y3R4 380 aa5.93□□□□□ -1.46
VPS50-206ENST00000443443 COX11Q9Y6N1 276 aa5.93□□□□□ -1.46
VPS50-206ENST00000443443 PCSK5Q92824 1860 aa5.92□□□□□ -1.46
VPS50-206ENST00000443443 A0A1W2PS29 197 aa5.92□□□□□ -1.46
VPS50-206ENST00000443443 FZD9O00144 591 aa5.92□□□□□ -1.46
VPS50-206ENST00000443443 MALP21145 153 aa5.92□□□□□ -1.46
VPS50-206ENST00000443443 FOLR3P41439 243 aa5.92□□□□□ -1.46
VPS50-206ENST00000443443 ADKP55263 362 aaKnown RBP5.92□□□□□ -1.46
VPS50-206ENST00000443443 PSMC1P62191 440 aaKnown RBP5.92□□□□□ -1.46
VPS50-206ENST00000443443 KRT85P78386 507 aa5.92□□□□□ -1.46
VPS50-206ENST00000443443 DYRK1AQ13627 763 aa5.92□□□□□ -1.46
VPS50-206ENST00000443443 AKNAD1Q5T1N1 836 aa5.92□□□□□ -1.46
VPS50-206ENST00000443443 SLC30A10Q6XR72 485 aa5.92□□□□□ -1.46
VPS50-206ENST00000443443 PDPRQ8NCN5 879 aa5.92□□□□□ -1.46
VPS50-206ENST00000443443 TMIEQ8NEW7 156 aa5.92□□□□□ -1.46
VPS50-206ENST00000443443 PRDM13Q9H4Q3 707 aa5.92□□□□□ -1.46
VPS50-206ENST00000443443 BRD9Q9H8M2 597 aa5.92□□□□□ -1.46
VPS50-206ENST00000443443 SLAMF7Q9NQ25 335 aa5.92□□□□□ -1.46
VPS50-206ENST00000443443 ADARB2Q9NS39 739 aaKnown RBP5.92□□□□□ -1.46
VPS50-206ENST00000443443 VSX1Q9NZR4 365 aaPredicted RBP5.92□□□□□ -1.46
VPS50-206ENST00000443443 FOXJ2Q9P0K8 574 aa5.92□□□□□ -1.46
VPS50-206ENST00000443443 COL4A3BPQ9Y5P4 624 aa5.92□□□□□ -1.46
VPS50-206ENST00000443443 CFAP20Q9Y6A4 193 aaKnown RBP5.92□□□□□ -1.46
VPS50-206ENST00000443443 CCDC195A0A1B0GUA6 201 aa5.91□□□□□ -1.46
VPS50-206ENST00000443443 ORC4O43929 436 aa5.91□□□□□ -1.46
VPS50-206ENST00000443443 SNUPNO95149 360 aaKnown RBP5.91□□□□□ -1.46
VPS50-206ENST00000443443 SNAPC2Q13487 334 aa5.91□□□□□ -1.46
VPS50-206ENST00000443443 ZNF362Q5T0B9 420 aaPredicted RBP5.91□□□□□ -1.46
VPS50-206ENST00000443443 ZNF384Q8TF68 577 aa5.91□□□□□ -1.46
VPS50-206ENST00000443443 TFAP2BQ92481 460 aa5.91□□□□□ -1.46
VPS50-206ENST00000443443 SNX19Q92543 992 aa5.91□□□□□ -1.46
VPS50-206ENST00000443443 CCDC136Q96JN2 1154 aa5.91□□□□□ -1.46
VPS50-206ENST00000443443 PDLIM2Q96JY6 352 aa5.91□□□□□ -1.46
VPS50-206ENST00000443443 SMOQ99835 787 aa5.91□□□□□ -1.46
VPS50-206ENST00000443443 LRFN3Q9BTN0 628 aa5.91□□□□□ -1.46
VPS50-206ENST00000443443 IL17RBQ9NRM6 502 aa5.91□□□□□ -1.46
VPS50-206ENST00000443443 GNL3LQ9NVN8 582 aaKnown RBP5.91□□□□□ -1.46
VPS50-206ENST00000443443 CTTNBP2NLQ9P2B4 639 aa5.91□□□□□ -1.46
VPS50-206ENST00000443443 F2RL2O00254 374 aa5.9□□□□□ -1.46
VPS50-206ENST00000443443 MGST3O14880 152 aa5.9□□□□□ -1.46
VPS50-206ENST00000443443 SUN1O94901 812 aa5.9□□□□□ -1.46
VPS50-206ENST00000443443 IGLV2-14P01704 120 aa5.9□□□□□ -1.46
VPS50-206ENST00000443443 GNAI3P08754 354 aa5.9□□□□□ -1.46
VPS50-206ENST00000443443 SRGNP10124 158 aa5.9□□□□□ -1.46
VPS50-206ENST00000443443 ANXA11P50995 505 aaKnown RBP5.9□□□□□ -1.46
VPS50-206ENST00000443443 CACNA2D1P54289 1103 aa5.9□□□□□ -1.46
VPS50-206ENST00000443443 C21orf58P58505 322 aa5.9□□□□□ -1.46
VPS50-206ENST00000443443 GNAI1P63096 354 aa5.9□□□□□ -1.46
VPS50-206ENST00000443443 CCDC93Q567U6 631 aa5.9□□□□□ -1.46
VPS50-206ENST00000443443 VWA1Q6PCB0 445 aa5.9□□□□□ -1.46
VPS50-206ENST00000443443 C3orf20Q8ND61 904 aa5.9□□□□□ -1.46
VPS50-206ENST00000443443 NSUN6Q8TEA1 469 aaKnown RBP5.9□□□□□ -1.46
VPS50-206ENST00000443443 FBXO41Q8TF61 875 aa5.9□□□□□ -1.46
VPS50-206ENST00000443443 NTN5Q8WTR8 489 aaPredicted RBP5.9□□□□□ -1.46
VPS50-206ENST00000443443 TRIB1Q96RU8 372 aa5.9□□□□□ -1.46
VPS50-206ENST00000443443 SLC13A1Q9BZW2 595 aa5.9□□□□□ -1.46
VPS50-206ENST00000443443 ALG13Q9NP73 1137 aaKnown RBP5.9□□□□□ -1.46
VPS50-206ENST00000443443 PCDH12Q9NPG4 1184 aa5.9□□□□□ -1.46
VPS50-206ENST00000443443 SLC17A6Q9P2U8 582 aa5.9□□□□□ -1.46
VPS50-206ENST00000443443 SPEF1Q9Y4P9 236 aa5.9□□□□□ -1.46
VPS50-206ENST00000443443 PCDHA3Q9Y5H8 950 aa5.9□□□□□ -1.46
VPS50-206ENST00000443443 NR2E3Q9Y5X4 410 aa5.9□□□□□ -1.46
VPS50-206ENST00000443443 LRRC14BA6NHZ5 514 aa5.89□□□□□ -1.47
VPS50-206ENST00000443443 POLRMTO00411 1230 aaKnown RBP5.89□□□□□ -1.47
VPS50-206ENST00000443443 CREB3O43889 395 aa5.89□□□□□ -1.47
VPS50-206ENST00000443443 ANXA1P04083 346 aa5.89□□□□□ -1.47
VPS50-206ENST00000443443 GJB1P08034 283 aa5.89□□□□□ -1.47
VPS50-206ENST00000443443 ZNF37AP17032 561 aaPredicted RBP5.89□□□□□ -1.47
VPS50-206ENST00000443443 CYP2C19P33261 490 aa5.89□□□□□ -1.47
VPS50-206ENST00000443443 PHKA1P46020 1223 aa5.89□□□□□ -1.47
VPS50-206ENST00000443443 RECQLP46063 649 aaPredicted RBP5.89□□□□□ -1.47
VPS50-206ENST00000443443 MC2RQ01718 297 aa5.89□□□□□ -1.47
VPS50-206ENST00000443443 DSC2Q02487 901 aa5.89□□□□□ -1.47
VPS50-206ENST00000443443 TAPT1Q6NXT6 567 aa5.89□□□□□ -1.47
VPS50-206ENST00000443443 SLC4A10Q6U841 1118 aa5.89□□□□□ -1.47
VPS50-206ENST00000443443 MICALCLQ6ZW33 695 aa5.89□□□□□ -1.47
VPS50-206ENST00000443443 ADGRG5Q8IZF4 528 aa5.89□□□□□ -1.47
VPS50-206ENST00000443443 B3GALNT2Q8NCR0 500 aa5.89□□□□□ -1.47
VPS50-206ENST00000443443 LPIN2Q92539 896 aa5.89□□□□□ -1.47
VPS50-206ENST00000443443 VOPP1Q96AW1 172 aa5.89□□□□□ -1.47
VPS50-206ENST00000443443 LRIG1Q96JA1 1093 aa5.89□□□□□ -1.47
VPS50-206ENST00000443443 ASB6Q9NWX5 421 aa5.89□□□□□ -1.47
VPS50-206ENST00000443443 TERF2IPQ9NYB0 399 aa5.89□□□□□ -1.47
VPS50-206ENST00000443443 POLHQ9Y253 713 aa5.89□□□□□ -1.47
VPS50-206ENST00000443443 ZNF785A8K8V0 405 aa5.88□□□□□ -1.47
VPS50-206ENST00000443443 F5H697 171 aa5.88□□□□□ -1.47
VPS50-206ENST00000443443 MPPED1O15442 326 aa5.88□□□□□ -1.47
VPS50-206ENST00000443443 C1RP00736 705 aa5.88□□□□□ -1.47
VPS50-206ENST00000443443 CHRM2P08172 466 aa5.88□□□□□ -1.47
VPS50-206ENST00000443443 PDCP20941 246 aa5.88□□□□□ -1.47
VPS50-206ENST00000443443 FBLP22087 321 aaKnown RBP5.88□□□□□ -1.47
VPS50-206ENST00000443443 FAM98AQ8NCA5 519 aaKnown RBP5.88□□□□□ -1.47
VPS50-206ENST00000443443 PMM1Q92871 262 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms