RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 ITIH5Q86UX2 942 aa12.75□□□□□ -0.37
TTC28-203ENST00000442232 SFR1Q86XK3 245 aa12.75□□□□□ -0.37
TTC28-203ENST00000442232 HS6ST3Q8IZP7 471 aa12.75□□□□□ -0.37
TTC28-203ENST00000442232 THEM5Q8N1Q8 247 aa12.75□□□□□ -0.37
TTC28-203ENST00000442232 ZSCAN18Q8TBC5 510 aaPredicted RBP12.75□□□□□ -0.37
TTC28-203ENST00000442232 FAM200AQ8TCP9 573 aa12.75□□□□□ -0.37
TTC28-203ENST00000442232 NUP210Q8TEM1 1887 aaPredicted RBP12.75□□□□□ -0.37
TTC28-203ENST00000442232 LRRC15Q8TF66 581 aa12.75□□□□□ -0.37
TTC28-203ENST00000442232 IRF7Q92985 503 aa12.75□□□□□ -0.37
TTC28-203ENST00000442232 E2F7Q96AV8 911 aa12.75□□□□□ -0.37
TTC28-203ENST00000442232 EPSTI1Q96J88 318 aa12.75□□□□□ -0.37
TTC28-203ENST00000442232 ASB16Q96NS5 453 aa12.75□□□□□ -0.37
TTC28-203ENST00000442232 GCNAQ96QF7 691 aa12.75□□□□□ -0.37
TTC28-203ENST00000442232 ACCSQ96QU6 501 aa12.75□□□□□ -0.37
TTC28-203ENST00000442232 HEBP1Q9NRV9 189 aa12.75□□□□□ -0.37
TTC28-203ENST00000442232 CEP72Q9P209 647 aa12.75□□□□□ -0.37
TTC28-203ENST00000442232 C2CD2Q9Y426 696 aa12.75□□□□□ -0.37
TTC28-203ENST00000442232 ASB3Q9Y575 518 aa12.75□□□□□ -0.37
TTC28-203ENST00000442232 SRPRBQ9Y5M8 271 aaKnown RBP12.75□□□□□ -0.37
TTC28-203ENST00000442232 MYO15AQ9UKN7 3530 aa12.75□□□□□ -0.37
TTC28-203ENST00000442232 SCN1AP35498 2009 aa12.74□□□□□ -0.37
TTC28-203ENST00000442232 MTMR11A4FU01 709 aa12.74□□□□□ -0.37
TTC28-203ENST00000442232 DPYSL4O14531 572 aa12.74□□□□□ -0.37
TTC28-203ENST00000442232 PPEF2O14830 753 aa12.74□□□□□ -0.37
TTC28-203ENST00000442232 KINO60870 393 aaKnown RBP12.74□□□□□ -0.37
TTC28-203ENST00000442232 LRRN2O75325 713 aa12.74□□□□□ -0.37
TTC28-203ENST00000442232 GCNT3O95395 438 aa12.74□□□□□ -0.37
TTC28-203ENST00000442232 IDEP14735 1019 aa12.74□□□□□ -0.37
TTC28-203ENST00000442232 PSMC3P17980 439 aa12.74□□□□□ -0.37
TTC28-203ENST00000442232 CD72P21854 359 aa12.74□□□□□ -0.37
TTC28-203ENST00000442232 FCARP24071 287 aa12.74□□□□□ -0.37
TTC28-203ENST00000442232 GDI1P31150 447 aa12.74□□□□□ -0.37
TTC28-203ENST00000442232 CCR2P41597 374 aa12.74□□□□□ -0.37
TTC28-203ENST00000442232 EPHA5P54756 1037 aa12.74□□□□□ -0.37
TTC28-203ENST00000442232 ALCAMQ13740 583 aa12.74□□□□□ -0.37
TTC28-203ENST00000442232 TEAD2Q15562 447 aa12.74□□□□□ -0.37
TTC28-203ENST00000442232 TAF12Q16514 161 aa12.74□□□□□ -0.37
TTC28-203ENST00000442232 SV2CQ496J9 727 aa12.74□□□□□ -0.37
TTC28-203ENST00000442232 SYCP3Q8IZU3 236 aa12.74□□□□□ -0.37
TTC28-203ENST00000442232 TMEM130Q8N3G9 435 aa12.74□□□□□ -0.37
TTC28-203ENST00000442232 ZNF560Q96MR9 790 aa12.74□□□□□ -0.37
TTC28-203ENST00000442232 SEPT5Q99719 369 aaPredicted RBP12.74□□□□□ -0.37
TTC28-203ENST00000442232 PYM1Q9BRP8 204 aaKnown RBP12.74□□□□□ -0.37
TTC28-203ENST00000442232 PLA2G2FQ9BZM2 168 aa12.74□□□□□ -0.37
TTC28-203ENST00000442232 ZSCAN16Q9H4T2 348 aaPredicted RBP12.74□□□□□ -0.37
TTC28-203ENST00000442232 DPP3Q9NY33 737 aa12.74□□□□□ -0.37
TTC28-203ENST00000442232 FBXO2Q9UK22 296 aaPredicted RBP12.74□□□□□ -0.37
TTC28-203ENST00000442232 FBXO4Q9UKT5 387 aa12.74□□□□□ -0.37
TTC28-203ENST00000442232 PCDHB13Q9Y5F0 798 aa12.74□□□□□ -0.37
TTC28-203ENST00000442232 CACNA1IQ9P0X4 2223 aa12.74□□□□□ -0.37
TTC28-203ENST00000442232 COL4A3Q01955 1670 aa12.73□□□□□ -0.37
TTC28-203ENST00000442232 ANKRD63C9JTQ0 380 aa12.73□□□□□ -0.37
TTC28-203ENST00000442232 ZNF263O14978 683 aa12.73□□□□□ -0.37
TTC28-203ENST00000442232 LDHAP00338 332 aaKnown RBP12.73□□□□□ -0.37
TTC28-203ENST00000442232 GLULP15104 373 aa12.73□□□□□ -0.37
TTC28-203ENST00000442232 SYT1P21579 422 aa12.73□□□□□ -0.37
TTC28-203ENST00000442232 TARSP26639 723 aaKnown RBP12.73□□□□□ -0.37
TTC28-203ENST00000442232 TUFMP49411 452 aaKnown RBP12.73□□□□□ -0.37
TTC28-203ENST00000442232 POU5F1Q01860 360 aaKnown RBP12.73□□□□□ -0.37
TTC28-203ENST00000442232 CSTF1Q05048 431 aaKnown RBP12.73□□□□□ -0.37
TTC28-203ENST00000442232 SMARCB1Q12824 385 aa12.73□□□□□ -0.37
TTC28-203ENST00000442232 RESTQ13127 1097 aa12.73□□□□□ -0.37
TTC28-203ENST00000442232 PPP2R5DQ14738 602 aa12.73□□□□□ -0.37
TTC28-203ENST00000442232 PTPAQ15257 358 aa12.73□□□□□ -0.37
TTC28-203ENST00000442232 ZNF528Q3MIS6 628 aa12.73□□□□□ -0.37
TTC28-203ENST00000442232 SLC39A12Q504Y0 691 aa12.73□□□□□ -0.37
TTC28-203ENST00000442232 L1TD1Q5T7N2 865 aaKnown RBP12.73□□□□□ -0.37
TTC28-203ENST00000442232 CENPPQ6IPU0 288 aa12.73□□□□□ -0.37
TTC28-203ENST00000442232 USP49Q70CQ1 688 aa12.73□□□□□ -0.37
TTC28-203ENST00000442232 ZNF720Q7Z2F6 126 aa12.73□□□□□ -0.37
TTC28-203ENST00000442232 NT5DC4Q86YG4 428 aa12.73□□□□□ -0.37
TTC28-203ENST00000442232 SHKBP1Q8TBC3 707 aa12.73□□□□□ -0.37
TTC28-203ENST00000442232 CSGALNACT1Q8TDX6 532 aa12.73□□□□□ -0.37
TTC28-203ENST00000442232 NOC3LQ8WTT2 800 aaKnown RBP12.73□□□□□ -0.37
TTC28-203ENST00000442232 BORCS6Q96GS4 357 aa12.73□□□□□ -0.37
TTC28-203ENST00000442232 INTS4Q96HW7 963 aaKnown RBP12.73□□□□□ -0.37
TTC28-203ENST00000442232 FIZ1Q96SL8 496 aa12.73□□□□□ -0.37
TTC28-203ENST00000442232 TRPV4Q9HBA0 871 aa12.73□□□□□ -0.37
TTC28-203ENST00000442232 TBC1D7Q9P0N9 293 aa12.73□□□□□ -0.37
TTC28-203ENST00000442232 HSFX1Q9UBD0 423 aa12.73□□□□□ -0.37
TTC28-203ENST00000442232 NDRG2Q9UN36 371 aaKnown RBP12.73□□□□□ -0.37
TTC28-203ENST00000442232 R3HCC1Q9Y3T6 440 aaKnown RBP12.73□□□□□ -0.37
TTC28-203ENST00000442232 DMDP11532 3685 aa12.73□□□□□ -0.37
TTC28-203ENST00000442232 A0A1W2PRU2 124 aa12.72□□□□□ -0.37
TTC28-203ENST00000442232 ANO9A1A5B4 782 aa12.72□□□□□ -0.37
TTC28-203ENST00000442232 TISP43B9A030 160 aa12.72□□□□□ -0.37
TTC28-203ENST00000442232 PIRO00625 290 aa12.72□□□□□ -0.37
TTC28-203ENST00000442232 CYB561D2O14569 222 aa12.72□□□□□ -0.37
TTC28-203ENST00000442232 SPTLC1O15269 473 aa12.72□□□□□ -0.37
TTC28-203ENST00000442232 CYP11A1P05108 521 aa12.72□□□□□ -0.37
TTC28-203ENST00000442232 GJA1P17302 382 aa12.72□□□□□ -0.37
TTC28-203ENST00000442232 PNPLA4P41247 253 aa12.72□□□□□ -0.37
TTC28-203ENST00000442232 VIPR2P41587 438 aa12.72□□□□□ -0.37
TTC28-203ENST00000442232 RPS9P46781 194 aaKnown RBP12.72□□□□□ -0.37
TTC28-203ENST00000442232 STK38Q15208 465 aa12.72□□□□□ -0.37
TTC28-203ENST00000442232 MGAT5BQ3V5L5 792 aa12.72□□□□□ -0.37
TTC28-203ENST00000442232 VITQ6UXI7 678 aa12.72□□□□□ -0.37
TTC28-203ENST00000442232 STXBP4Q6ZWJ1 553 aa12.72□□□□□ -0.37
TTC28-203ENST00000442232 MFSD6LQ8IWD5 586 aa12.72□□□□□ -0.37
TTC28-203ENST00000442232 CCDC65Q8IXS2 484 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms